RNA–Protein interactions for RNA: ENST00000491658.1

TFRC-215, Transcript of transferrin receptor, human

TSL 5

Gene TFRC, Length 396 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TFRC-215	ENST00000491658	COPZ1	P61923	177 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	RPS25	P62851	125 aa	Known RBP	0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	HBB	P68871	147 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	BTG2	P78543	158 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	MRPS36	P82909	103 aa	Known RBP	0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	ASB16-AS1	Q495Z4	193 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	TMEM155	Q4W5P6	130 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	PABPC1L2A	Q5JQF8	200 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	GLYATL3	Q5SZD4	288 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	EIF5AL1	Q6IS14	154 aa	Known RBP	0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	LYZL1	Q6UWQ5	148 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	TMEM14EP	Q6UXP3	125 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	ZNF705A	Q6ZN79	300 aa	Predicted RBP	0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	LINC00305	Q7Z4B0	112 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	SPATA12	Q7Z6I5	190 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	ATOH7	Q8N100	152 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	RPP25L	Q8N5L8	163 aa	Known RBP	0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	OR2T10	Q8NGZ9	312 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	PFN4	Q8NHR9	129 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	NAT14	Q8WUY8	206 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	FGF13	Q92913	245 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	RNASE6	Q93091	150 aa	Known RBP	0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	CARD19	Q96LW7	228 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	PPP3R2	Q96LZ3	170 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	AP1S3	Q96PC3	154 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	TP53RK	Q96S44	253 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	C12orf57	Q99622	126 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	MIEN1	Q9BRT3	115 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	ADAT1	Q9BUB4	502 aa	Known RBP	0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	TMEM191A	Q9H0A3	160 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	TAF9B	Q9HBM6	251 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	SAR1A	Q9NR31	198 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	CBLN4	Q9NTU7	201 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	RBM7	Q9Y580	266 aa	Known RBP	0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	MINOS1-NBL1	R4GNA1	71 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	SBF1	O95248	1867 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	MYH3	P11055	1940 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	LRRC37A	A6NMS7	1700 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	KIAA1551	Q9HCM1	1747 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	SSC5D	A1L4H1	1573 aa		0.83	□□□□□ -2.28
TFRC-215	ENST00000491658	MYH2	Q9UKX2	1941 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	MYH13	Q9UKX3	1938 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	DICER1	Q9UPY3	1922 aa	Known RBP	0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	IGLV3-9	A0A075B6K5	115 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	IGKV1D-43	A0A0B4J1Z2	117 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	PVALEF	A0A1B0GWK0	134 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	ATP6V1G2-DDX39B	F2Z307	99 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	TMEM256-PLSCR3	K7ERE1	68 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	SDCBP	O00560	298 aa	Predicted RBP	0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	CDC42EP2	O14613	210 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	UQCRQ	O14949	82 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	ZNF25	P17030	456 aa	Predicted RBP	0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	HLA-DMB	P28068	263 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	RNASE4	P34096	147 aa	Known RBP	0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	GUCA1A	P43080	201 aa	Predicted RBP	0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	INSL3	P51460	131 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	SLC38A11	Q08AI6	406 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	FAM229B	Q4G0N7	80 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	LINC01545	Q5VT33	79 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	TMEM244	Q5VVB8	128 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658		Q5XG85	94 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	SCIMP	Q6UWF3	145 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	HRCT1	Q6UXD1	115 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	C4orf22	Q6V702	233 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	DPPA3	Q6W0C5	159 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	CTAGE3P	Q8IX95	158 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	C10orf111	Q8N326	155 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	DEFB123	Q8N688	67 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	ACBD7	Q8N6N7	88 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	TCTEX1D1	Q8N7M0	179 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	SIGLECL1	Q8N7X8	197 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	OR4E2	Q8NGC2	313 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	OR4B1	Q8NGF8	309 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	ZNF418	Q8TF45	676 aa	Predicted RBP	0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	COPS9	Q8WXC6	57 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	GINS4	Q9BRT9	223 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	PSMG3	Q9BT73	122 aa	Predicted RBP	0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	MRPL32	Q9BYC8	188 aa	Known RBP	0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	SMIM3	Q9BZL3	60 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	CACYBP	Q9HB71	228 aa	Known RBP	0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	GNG8	Q9UK08	70 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	TIMM9	Q9Y5J7	89 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	MPC1	Q9Y5U8	109 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	DOCK2	Q92608	1830 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	NOTCH1	P46531	2555 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	DOCK1	Q14185	1865 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	NAV1	Q8NEY1	1877 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	TRPM7	Q96QT4	1865 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	EP400	Q96L91	3159 aa		0.82	□□□□□ -2.28
TFRC-215	ENST00000491658	AKAP11	Q9UKA4	1901 aa		0.81	□□□□□ -2.28
TFRC-215	ENST00000491658	ARAP2	Q8WZ64	1704 aa		0.81	□□□□□ -2.28
TFRC-215	ENST00000491658	MAST2	Q6P0Q8	1798 aa		0.81	□□□□□ -2.28
TFRC-215	ENST00000491658	ROS1	P08922	2347 aa		0.81	□□□□□ -2.28
TFRC-215	ENST00000491658	ECM29	Q5VYK3	1845 aa		0.81	□□□□□ -2.28
TFRC-215	ENST00000491658	IGHV3-64	A0A075B6Q5	118 aa		0.81	□□□□□ -2.28
TFRC-215	ENST00000491658	TRAV7	A0A075B6U4	112 aa		0.81	□□□□□ -2.28
TFRC-215	ENST00000491658	TRAV27	A0A087WT01	109 aa		0.81	□□□□□ -2.28
TFRC-215	ENST00000491658	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	0.81	□□□□□ -2.28
TFRC-215	ENST00000491658	TRGV5	A0A0B4J1U4	118 aa		0.81	□□□□□ -2.28
TFRC-215	ENST00000491658	IGKV1-9	A0A0C4DH69	117 aa		0.81	□□□□□ -2.28

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