RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 PRNTQ86SH4 94 aa10.33□□□□□ -0.76
HLA-F-229ENST00000489502 CCDC28AQ8IWP9 274 aa10.33□□□□□ -0.76
HLA-F-229ENST00000489502 TMEM75Q8N9X5 138 aa10.33□□□□□ -0.76
HLA-F-229ENST00000489502 C8orf49Q96NF6 230 aa10.33□□□□□ -0.76
HLA-F-229ENST00000489502 NKX6-2Q9C056 277 aaPredicted RBP10.33□□□□□ -0.76
HLA-F-229ENST00000489502 PSG8Q9UQ74 426 aa10.33□□□□□ -0.76
HLA-F-229ENST00000489502 LENEPQ9Y5L5 61 aa10.33□□□□□ -0.76
HLA-F-229ENST00000489502 CSMD3Q7Z407 3707 aa10.32□□□□□ -0.76
HLA-F-229ENST00000489502 SCO2A0A1W2PP80 73 aa10.32□□□□□ -0.76
HLA-F-229ENST00000489502 PLAC8L1A1L4L8 177 aa10.32□□□□□ -0.76
HLA-F-229ENST00000489502 TMEM189A5PLL7 270 aa10.32□□□□□ -0.76
HLA-F-229ENST00000489502 C3orf84H3BNL1 204 aa10.32□□□□□ -0.76
HLA-F-229ENST00000489502 ZNF324O75467 553 aaPredicted RBP10.32□□□□□ -0.76
HLA-F-229ENST00000489502 Q86TA4 180 aa10.32□□□□□ -0.76
HLA-F-229ENST00000489502 NDFIP1Q9BT67 221 aa10.32□□□□□ -0.76
HLA-F-229ENST00000489502 TREM1Q9NP99 234 aa10.32□□□□□ -0.76
HLA-F-229ENST00000489502 TENM2Q9NT68 2774 aa10.31□□□□□ -0.76
HLA-F-229ENST00000489502 C11orf94C9JXX5 98 aa10.31□□□□□ -0.76
HLA-F-229ENST00000489502 TEX46H3BTG2 121 aa10.31□□□□□ -0.76
HLA-F-229ENST00000489502 AKR1C3P42330 323 aa10.31□□□□□ -0.76
HLA-F-229ENST00000489502 PPT1P50897 306 aa10.31□□□□□ -0.76
HLA-F-229ENST00000489502 MUC21Q5SSG8 566 aa10.31□□□□□ -0.76
HLA-F-229ENST00000489502 CASC10Q5T4H9 136 aa10.31□□□□□ -0.76
HLA-F-229ENST00000489502 FAM222AQ5U5X8 452 aa10.31□□□□□ -0.76
HLA-F-229ENST00000489502 RNASE8Q8TDE3 154 aaKnown RBP10.31□□□□□ -0.76
HLA-F-229ENST00000489502 TMEM263Q8WUH6 116 aaKnown RBP10.31□□□□□ -0.76
HLA-F-229ENST00000489502 HIST1H2BAQ96A08 127 aa10.31□□□□□ -0.76
HLA-F-229ENST00000489502 C16orf74Q96GX8 76 aa10.31□□□□□ -0.76
HLA-F-229ENST00000489502 PYGO2Q9BRQ0 406 aa10.31□□□□□ -0.76
HLA-F-229ENST00000489502 MANBALQ9NQG1 85 aa10.31□□□□□ -0.76
HLA-F-229ENST00000489502 Q6AWC8 147 aa10.3□□□□□ -0.76
HLA-F-229ENST00000489502 Q6ZTC4 211 aa10.3□□□□□ -0.76
HLA-F-229ENST00000489502 DKK2Q9UBU2 259 aa10.3□□□□□ -0.76
HLA-F-229ENST00000489502 NAGKQ9UJ70 344 aa10.3□□□□□ -0.76
HLA-F-229ENST00000489502 IGHV1OR15-1A0A075B7D0 117 aa10.29□□□□□ -0.76
HLA-F-229ENST00000489502 CBY3A6NI87 242 aa10.29□□□□□ -0.76
HLA-F-229ENST00000489502 RGS13O14921 159 aa10.29□□□□□ -0.76
HLA-F-229ENST00000489502 SPART-AS1P0CW21 52 aa10.29□□□□□ -0.76
HLA-F-229ENST00000489502 ZNF80P51504 273 aaPredicted RBP10.29□□□□□ -0.76
HLA-F-229ENST00000489502 UBE2G1P62253 170 aa10.29□□□□□ -0.76
HLA-F-229ENST00000489502 C12orf74Q32Q52 190 aa10.29□□□□□ -0.76
HLA-F-229ENST00000489502 EIF4E3Q8N5X7 224 aaKnown RBP10.29□□□□□ -0.76
HLA-F-229ENST00000489502 TCEAL7Q9BRU2 100 aa10.29□□□□□ -0.76
HLA-F-229ENST00000489502 TP53TG3Q9ULZ0 132 aa10.29□□□□□ -0.76
HLA-F-229ENST00000489502 FBLL1A6NHQ2 334 aaKnown RBP10.28□□□□□ -0.76
HLA-F-229ENST00000489502 GCGP01275 180 aa10.28□□□□□ -0.76
HLA-F-229ENST00000489502 IFNA1P01562 189 aa10.28□□□□□ -0.76
HLA-F-229ENST00000489502 BCL2P10415 239 aa10.28□□□□□ -0.76
HLA-F-229ENST00000489502 ZNF493Q6ZR52 646 aa10.28□□□□□ -0.76
HLA-F-229ENST00000489502 C2CD4CQ8TF44 421 aa10.28□□□□□ -0.76
HLA-F-229ENST00000489502 PHLDA1Q8WV24 401 aaPredicted RBP10.28□□□□□ -0.76
HLA-F-229ENST00000489502 BLOC1S1P78537 153 aa10.27□□□□□ -0.77
HLA-F-229ENST00000489502 C11orf72Q8NBR9 251 aa10.27□□□□□ -0.77
HLA-F-229ENST00000489502 PCNPQ8WW12 178 aaKnown RBP10.27□□□□□ -0.77
HLA-F-229ENST00000489502 FMC1Q96HJ9 113 aa10.27□□□□□ -0.77
HLA-F-229ENST00000489502 LINC00467Q9BRT7 94 aa10.27□□□□□ -0.77
HLA-F-229ENST00000489502 NOP10Q9NPE3 64 aaKnown RBP10.27□□□□□ -0.77
HLA-F-229ENST00000489502 GSN-AS1Q9NRJ2 163 aa10.27□□□□□ -0.77
HLA-F-229ENST00000489502 TRAV21A0A0B4J279 112 aa10.26□□□□□ -0.77
HLA-F-229ENST00000489502 TEX48A0A1B0GUV7 120 aa10.26□□□□□ -0.77
HLA-F-229ENST00000489502 NUPR2A6NF83 97 aa10.26□□□□□ -0.77
HLA-F-229ENST00000489502 DEFB130BP0DP73 79 aa10.26□□□□□ -0.77
HLA-F-229ENST00000489502 DEFB130AP0DP74 79 aa10.26□□□□□ -0.77
HLA-F-229ENST00000489502 DAD1P61803 113 aa10.26□□□□□ -0.77
HLA-F-229ENST00000489502 ANXA2RQ3ZCQ2 193 aa10.26□□□□□ -0.77
HLA-F-229ENST00000489502 SMUG1Q53HV7 270 aa10.26□□□□□ -0.77
HLA-F-229ENST00000489502 NHLRC2Q8NBF2 726 aa10.26□□□□□ -0.77
HLA-F-229ENST00000489502 ZNF680Q8NEM1 530 aa10.26□□□□□ -0.77
HLA-F-229ENST00000489502 DERL1Q9BUN8 251 aa10.26□□□□□ -0.77
HLA-F-229ENST00000489502 KLF12Q9Y4X4 402 aa10.26□□□□□ -0.77
HLA-F-229ENST00000489502 LYRM9A8MSI8 78 aa10.25□□□□□ -0.77
HLA-F-229ENST00000489502 SNURFLB1AK76 121 aa10.25□□□□□ -0.77
HLA-F-229ENST00000489502 MEF2BQ02080 365 aaPredicted RBP10.25□□□□□ -0.77
HLA-F-229ENST00000489502 TMEM183BQ1AE95 376 aa10.25□□□□□ -0.77
HLA-F-229ENST00000489502 SAPCD1Q5SSQ6 148 aa10.25□□□□□ -0.77
HLA-F-229ENST00000489502 CEMP1Q6PRD7 247 aaPredicted RBP10.25□□□□□ -0.77
HLA-F-229ENST00000489502 FAM159AQ6UWV7 190 aa10.25□□□□□ -0.77
HLA-F-229ENST00000489502 TMEM183AQ8IXX5 376 aa10.25□□□□□ -0.77
HLA-F-229ENST00000489502 C11orf52Q96A22 123 aa10.25□□□□□ -0.77
HLA-F-229ENST00000489502 ZC2HC1AQ96GY0 325 aa10.25□□□□□ -0.77
HLA-F-229ENST00000489502 C11orf21Q9P2W6 132 aa10.25□□□□□ -0.77
HLA-F-229ENST00000489502 TIMM8BQ9Y5J9 83 aaPredicted RBP10.25□□□□□ -0.77
HLA-F-229ENST00000489502 TRAV10A0A0B4J240 114 aa10.24□□□□□ -0.77
HLA-F-229ENST00000489502 LTAP01374 205 aa10.24□□□□□ -0.77
HLA-F-229ENST00000489502 PFN1P07737 140 aaKnown RBP10.24□□□□□ -0.77
HLA-F-229ENST00000489502 HTN3P15516 51 aa10.24□□□□□ -0.77
HLA-F-229ENST00000489502 TCL1AP56279 114 aa10.24□□□□□ -0.77
HLA-F-229ENST00000489502 ZNF415Q09FC8 603 aa10.24□□□□□ -0.77
HLA-F-229ENST00000489502 TEX261Q6UWH6 196 aa10.24□□□□□ -0.77
HLA-F-229ENST00000489502 DYNC2H1Q8NCM8 4307 aaKnown RBP10.24□□□□□ -0.77
HLA-F-229ENST00000489502 TRBV6-1A0A0K0K1D8 114 aa10.23□□□□□ -0.77
HLA-F-229ENST00000489502 TYMSP04818 313 aa10.23□□□□□ -0.77
HLA-F-229ENST00000489502 RPL35P42766 123 aaKnown RBP10.23□□□□□ -0.77
HLA-F-229ENST00000489502 Q6ZTI0 123 aa10.23□□□□□ -0.77
HLA-F-229ENST00000489502 LYPD6BQ8NI32 183 aa10.23□□□□□ -0.77
HLA-F-229ENST00000489502 TXNDC17Q9BRA2 123 aa10.23□□□□□ -0.77
HLA-F-229ENST00000489502 VAX2Q9UIW0 290 aa10.23□□□□□ -0.77
HLA-F-229ENST00000489502 TRGV11A0A075B6L2 103 aa10.22□□□□□ -0.77
HLA-F-229ENST00000489502 DEFB131BA0A096LNP1 70 aa10.22□□□□□ -0.77
HLA-F-229ENST00000489502 GAGE12BA1L429 117 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms