RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 FAM3BP58499 235 aaPredicted RBP9.74□□□□□ -0.85
VTI1A-206ENST00000489142 GNG5P63218 68 aa9.74□□□□□ -0.85
VTI1A-206ENST00000489142 LYPD1Q8N2G4 141 aa9.74□□□□□ -0.85
VTI1A-206ENST00000489142 RXFP4Q8TDU9 374 aa9.74□□□□□ -0.85
VTI1A-206ENST00000489142 ARPC5LQ9BPX5 153 aa9.74□□□□□ -0.85
VTI1A-206ENST00000489142 OTORQ9NRC9 128 aa9.74□□□□□ -0.85
VTI1A-206ENST00000489142 PKHD1P08F94 4074 aa9.74□□□□□ -0.85
VTI1A-206ENST00000489142 MUC4Q99102 2169 aa9.73□□□□□ -0.85
VTI1A-206ENST00000489142 NBDYA0A0U1RRE5 68 aa9.73□□□□□ -0.85
VTI1A-206ENST00000489142 RBAKDNA6NC62 111 aa9.73□□□□□ -0.85
VTI1A-206ENST00000489142 SPINK4O60575 86 aa9.73□□□□□ -0.85
VTI1A-206ENST00000489142 ARL14EPLP0DKL9 152 aa9.73□□□□□ -0.85
VTI1A-206ENST00000489142 ZNF266Q14584 549 aa9.73□□□□□ -0.85
VTI1A-206ENST00000489142 GOLT1AQ6ZVE7 132 aa9.73□□□□□ -0.85
VTI1A-206ENST00000489142 VSIG2Q96IQ7 327 aa9.73□□□□□ -0.85
VTI1A-206ENST00000489142 AQP10Q96PS8 301 aa9.73□□□□□ -0.85
VTI1A-206ENST00000489142 SH3BGRL3Q9H299 93 aa9.73□□□□□ -0.85
VTI1A-206ENST00000489142 NAGKQ9UJ70 344 aa9.73□□□□□ -0.85
VTI1A-206ENST00000489142 TRAV8-1A0A0A6YYK1 113 aa9.72□□□□□ -0.85
VTI1A-206ENST00000489142 F6UZH7 168 aa9.72□□□□□ -0.85
VTI1A-206ENST00000489142 ATP6V0CP27449 155 aa9.72□□□□□ -0.85
VTI1A-206ENST00000489142 CDC34P49427 236 aaPredicted RBP9.72□□□□□ -0.85
VTI1A-206ENST00000489142 ESRGQ1W209 222 aa9.72□□□□□ -0.85
VTI1A-206ENST00000489142 IBA57Q5T440 356 aaKnown RBP9.72□□□□□ -0.85
VTI1A-206ENST00000489142 PQLC2Q6ZP29 291 aa9.72□□□□□ -0.85
VTI1A-206ENST00000489142 CMTM2Q8TAZ6 248 aa9.72□□□□□ -0.85
VTI1A-206ENST00000489142 SGK494Q96LW2 274 aa9.72□□□□□ -0.85
VTI1A-206ENST00000489142 MDFICQ9P1T7 246 aa9.72□□□□□ -0.85
VTI1A-206ENST00000489142 PKD1P98161 4303 aa9.71□□□□□ -0.85
VTI1A-206ENST00000489142 FXYD6-FXYD2A0A087WZ82 144 aa9.71□□□□□ -0.86
VTI1A-206ENST00000489142 TRBV7-9A0A0J9YWB2 115 aa9.71□□□□□ -0.86
VTI1A-206ENST00000489142 ZNF415Q09FC8 603 aa9.71□□□□□ -0.86
VTI1A-206ENST00000489142 TMEM183BQ1AE95 376 aa9.71□□□□□ -0.86
VTI1A-206ENST00000489142 SOHLH1Q5JUK2 328 aa9.71□□□□□ -0.86
VTI1A-206ENST00000489142 TMEM183AQ8IXX5 376 aa9.71□□□□□ -0.86
VTI1A-206ENST00000489142 GIPP09681 153 aaPredicted RBP9.7□□□□□ -0.86
VTI1A-206ENST00000489142 FAM74A1Q5RGS3 127 aa9.7□□□□□ -0.86
VTI1A-206ENST00000489142 Q6AWC8 147 aa9.7□□□□□ -0.86
VTI1A-206ENST00000489142 OR2G3Q8NGZ4 309 aa9.7□□□□□ -0.86
VTI1A-206ENST00000489142 RAB24Q969Q5 203 aa9.7□□□□□ -0.86
VTI1A-206ENST00000489142 TVP23CQ96ET8 276 aa9.7□□□□□ -0.86
VTI1A-206ENST00000489142 ST6GAL2Q96JF0 529 aa9.7□□□□□ -0.86
VTI1A-206ENST00000489142 KRTAP1-5Q9BYS1 174 aa9.7□□□□□ -0.86
VTI1A-206ENST00000489142 Q9H8V8 135 aa9.7□□□□□ -0.86
VTI1A-206ENST00000489142 A0A096LPF7 62 aa9.69□□□□□ -0.86
VTI1A-206ENST00000489142 RNF222A6NCQ9 220 aa9.69□□□□□ -0.86
VTI1A-206ENST00000489142 SFTA3P0C7M3 94 aa9.69□□□□□ -0.86
VTI1A-206ENST00000489142 STAG3L2P0CL84 134 aa9.69□□□□□ -0.86
VTI1A-206ENST00000489142 STAG3L3P0CL85 134 aa9.69□□□□□ -0.86
VTI1A-206ENST00000489142 GCHFRP30047 84 aa9.69□□□□□ -0.86
VTI1A-206ENST00000489142 TNP2Q05952 138 aa9.69□□□□□ -0.86
VTI1A-206ENST00000489142 RPL7L1Q6DKI1 246 aaKnown RBP9.69□□□□□ -0.86
VTI1A-206ENST00000489142 C6orf223Q8N319 242 aa9.69□□□□□ -0.86
VTI1A-206ENST00000489142 C18orf15Q96N68 181 aa9.69□□□□□ -0.86
VTI1A-206ENST00000489142 C8orf49Q96NF6 230 aa9.69□□□□□ -0.86
VTI1A-206ENST00000489142 PSMG3Q9BT73 122 aaPredicted RBP9.69□□□□□ -0.86
VTI1A-206ENST00000489142 H3BNG1 76 aa9.68□□□□□ -0.86
VTI1A-206ENST00000489142 PAX4O43316 350 aa9.68□□□□□ -0.86
VTI1A-206ENST00000489142 GNRH2O43555 120 aa9.68□□□□□ -0.86
VTI1A-206ENST00000489142 FAM159AQ6UWV7 190 aa9.68□□□□□ -0.86
VTI1A-206ENST00000489142 ZNF575Q86XF7 245 aa9.68□□□□□ -0.86
VTI1A-206ENST00000489142 IQCF2Q8IXL9 164 aa9.68□□□□□ -0.86
VTI1A-206ENST00000489142 INO80EQ8NBZ0 244 aaPredicted RBP9.68□□□□□ -0.86
VTI1A-206ENST00000489142 OR2T35Q8NGX2 323 aa9.68□□□□□ -0.86
VTI1A-206ENST00000489142 TMED6Q8WW62 240 aa9.68□□□□□ -0.86
VTI1A-206ENST00000489142 LENEPQ9Y5L5 61 aa9.68□□□□□ -0.86
VTI1A-206ENST00000489142 HERC2O95714 4834 aa9.67□□□□□ -0.86
VTI1A-206ENST00000489142 FHL2Q14192 279 aa9.67□□□□□ -0.86
VTI1A-206ENST00000489142 TREM1Q9NP99 234 aa9.67□□□□□ -0.86
VTI1A-206ENST00000489142 TNFSF18Q9UNG2 199 aa9.67□□□□□ -0.86
VTI1A-206ENST00000489142 MRPS16Q9Y3D3 137 aaKnown RBP9.67□□□□□ -0.86
VTI1A-206ENST00000489142 TRGV11A0A075B6L2 103 aa9.66□□□□□ -0.86
VTI1A-206ENST00000489142 GGTLC3B5MD39 225 aa9.66□□□□□ -0.86
VTI1A-206ENST00000489142 G3V3Q6 166 aa9.66□□□□□ -0.86
VTI1A-206ENST00000489142 RGS21Q2M5E4 152 aa9.66□□□□□ -0.86
VTI1A-206ENST00000489142 ZNF479Q96JC4 524 aa9.66□□□□□ -0.86
VTI1A-206ENST00000489142 KIAA1109Q2LD37 5005 aa9.66□□□□□ -0.86
VTI1A-206ENST00000489142 TRGV4A0A0C4DH28 118 aa9.65□□□□□ -0.86
VTI1A-206ENST00000489142 SMLR1H3BR10 107 aa9.65□□□□□ -0.86
VTI1A-206ENST00000489142 MBP02144 154 aa9.65□□□□□ -0.86
VTI1A-206ENST00000489142 TCRAP04437 139 aa9.65□□□□□ -0.86
VTI1A-206ENST00000489142 TYMSP04818 313 aa9.65□□□□□ -0.86
VTI1A-206ENST00000489142 ZNF80P51504 273 aaPredicted RBP9.65□□□□□ -0.86
VTI1A-206ENST00000489142 CRYBA4P53673 196 aa9.65□□□□□ -0.86
VTI1A-206ENST00000489142 SUMO1P63165 101 aaKnown RBP9.65□□□□□ -0.86
VTI1A-206ENST00000489142 SERF2P84101 59 aa9.65□□□□□ -0.86
VTI1A-206ENST00000489142 ZNF726P1Q15940 193 aa9.65□□□□□ -0.86
VTI1A-206ENST00000489142 C5orf17Q8NAS9 161 aa9.65□□□□□ -0.86
VTI1A-206ENST00000489142 ASB13Q8WXK3 278 aa9.65□□□□□ -0.86
VTI1A-206ENST00000489142 UPK3BQ9BT76 320 aa9.65□□□□□ -0.86
VTI1A-206ENST00000489142 ACTR3CQ9C0K3 210 aaPredicted RBP9.65□□□□□ -0.86
VTI1A-206ENST00000489142 HHLA3Q9XRX5 114 aa9.65□□□□□ -0.86
VTI1A-206ENST00000489142 ICOSQ9Y6W8 199 aa9.65□□□□□ -0.86
VTI1A-206ENST00000489142 BORCS7-ASMTA0A0B4J1R7 106 aa9.64□□□□□ -0.87
VTI1A-206ENST00000489142 TRAV21A0A0B4J279 112 aa9.64□□□□□ -0.87
VTI1A-206ENST00000489142 IGHV3-16A0A0C4DH30 117 aa9.64□□□□□ -0.87
VTI1A-206ENST00000489142 CXorf1O96002 111 aa9.64□□□□□ -0.87
VTI1A-206ENST00000489142 FGF8P55075 233 aaPredicted RBP9.64□□□□□ -0.87
VTI1A-206ENST00000489142 TDRG1Q3Y452 100 aa9.64□□□□□ -0.87
VTI1A-206ENST00000489142 SUN5Q8TC36 379 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms