RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 GPR179Q6PRD1 2367 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 TTC37Q6PGP7 1564 aa1.47□□□□□ -2.17
LAPTM4A-202ENST00000483117 IGKV2D-26A0A0A0MRZ7 120 aa1.46□□□□□ -2.18
LAPTM4A-202ENST00000483117 TRAV1-1A0A0B4J248 108 aa1.46□□□□□ -2.18
LAPTM4A-202ENST00000483117 IGKV2-24A0A0C4DH68 120 aa1.46□□□□□ -2.18
LAPTM4A-202ENST00000483117 LOC100130705A0A1B0GUX0 176 aa1.46□□□□□ -2.18
LAPTM4A-202ENST00000483117 E7EQL1 145 aa1.46□□□□□ -2.18
LAPTM4A-202ENST00000483117 KRTAP12-3P60328 96 aa1.46□□□□□ -2.18
LAPTM4A-202ENST00000483117 RPL26P61254 145 aaKnown RBP1.46□□□□□ -2.18
LAPTM4A-202ENST00000483117 PDE6HQ13956 83 aa1.46□□□□□ -2.18
LAPTM4A-202ENST00000483117 PLPP5Q8NEB5 264 aa1.46□□□□□ -2.18
LAPTM4A-202ENST00000483117 OR10AG1Q8NH19 301 aa1.46□□□□□ -2.18
LAPTM4A-202ENST00000483117 VSTM2AQ8TAG5 236 aa1.46□□□□□ -2.18
LAPTM4A-202ENST00000483117 MRPL57Q9BQC6 102 aaKnown RBP1.46□□□□□ -2.18
LAPTM4A-202ENST00000483117 AGPAT4-IT1Q9H0P7 198 aa1.46□□□□□ -2.18
LAPTM4A-202ENST00000483117 NOP16Q9Y3C1 178 aaKnown RBP1.46□□□□□ -2.18
LAPTM4A-202ENST00000483117 SERP1Q9Y6X1 66 aa1.46□□□□□ -2.18
LAPTM4A-202ENST00000483117 WDR97A6NE52 1622 aa1.46□□□□□ -2.18
LAPTM4A-202ENST00000483117 ZFYVE16Q7Z3T8 1539 aa1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 FOCADQ5VW36 1801 aa1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 PZPP20742 1482 aa1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 LCTP09848 1927 aa1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 TRAV10A0A0B4J240 114 aa1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 C3orf85A0A1B0GTC6 90 aa1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 A6NN06 94 aa1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 CCDC179H3BU77 68 aa1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 EDF1O60869 148 aaKnown RBP1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 CXCL8P10145 99 aa1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 PIPP12273 146 aaPredicted RBP1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 HSD52Q0P140 79 aa1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 C1orf134Q5TEV5 83 aa1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 Q6AWC8 147 aa1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 OR2T2Q6IF00 324 aa1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 MRPL54Q6P161 138 aaKnown RBP1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 SNX29P2Q8IUI4 249 aa1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 LINC00269Q8N2A0 174 aa1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 SVBPQ8N300 66 aa1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 TVP23CQ96ET8 276 aa1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 NAA38Q9BRA0 125 aaKnown RBP1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 SEC11CQ9BY50 192 aa1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 ZNF407Q9C0G0 2248 aa1.45□□□□□ -2.18
LAPTM4A-202ENST00000483117 GREB1Q4ZG55 1949 aa1.44□□□□□ -2.18
LAPTM4A-202ENST00000483117 NRKQ7Z2Y5 1582 aa1.44□□□□□ -2.18
LAPTM4A-202ENST00000483117 RTEL1-TNFRSF6BF6WH68 1400 aa1.44□□□□□ -2.18
LAPTM4A-202ENST00000483117 TROQ12816 1431 aaPredicted RBP1.44□□□□□ -2.18
LAPTM4A-202ENST00000483117 NSD3Q9BZ95 1437 aa1.44□□□□□ -2.18
LAPTM4A-202ENST00000483117 MCRIP1C9JLW8 97 aa1.44□□□□□ -2.18
LAPTM4A-202ENST00000483117 GEMIN2O14893 280 aaKnown RBP1.44□□□□□ -2.18
LAPTM4A-202ENST00000483117 ZNF833PQ6ZTB9 187 aa1.44□□□□□ -2.18
LAPTM4A-202ENST00000483117 GKN2Q86XP6 184 aa1.44□□□□□ -2.18
LAPTM4A-202ENST00000483117 PPDPFLQ8WWR9 84 aa1.44□□□□□ -2.18
LAPTM4A-202ENST00000483117 LINC00526Q96FQ7 95 aa1.44□□□□□ -2.18
LAPTM4A-202ENST00000483117 AQP10Q96PS8 301 aa1.44□□□□□ -2.18
LAPTM4A-202ENST00000483117 DAPK1P53355 1430 aa1.43□□□□□ -2.18
LAPTM4A-202ENST00000483117 SPAARA0A1B0GVQ0 90 aa1.43□□□□□ -2.18
LAPTM4A-202ENST00000483117 CCL25O15444 150 aa1.43□□□□□ -2.18
LAPTM4A-202ENST00000483117 KLF7O75840 302 aaPredicted RBP1.43□□□□□ -2.18
LAPTM4A-202ENST00000483117 NDUFB6O95139 128 aa1.43□□□□□ -2.18
LAPTM4A-202ENST00000483117 IFITM1P13164 125 aa1.43□□□□□ -2.18
LAPTM4A-202ENST00000483117 ADCYAP1P18509 176 aa1.43□□□□□ -2.18
LAPTM4A-202ENST00000483117 BRS3P32247 399 aa1.43□□□□□ -2.18
LAPTM4A-202ENST00000483117 CATR1Q13166 79 aa1.43□□□□□ -2.18
LAPTM4A-202ENST00000483117 COL5A1-AS1Q5SY13 56 aa1.43□□□□□ -2.18
LAPTM4A-202ENST00000483117 SPANXN1Q5VSR9 72 aa1.43□□□□□ -2.18
LAPTM4A-202ENST00000483117 FOXI2Q6ZQN5 318 aa1.43□□□□□ -2.18
LAPTM4A-202ENST00000483117 TTC9CQ8N5M4 171 aa1.43□□□□□ -2.18
LAPTM4A-202ENST00000483117 C9orf163Q8N9P6 203 aa1.43□□□□□ -2.18
LAPTM4A-202ENST00000483117 DYNLRB2Q8TF09 96 aa1.43□□□□□ -2.18
LAPTM4A-202ENST00000483117 SPTSSAQ969W0 71 aa1.43□□□□□ -2.18
LAPTM4A-202ENST00000483117 TIMM21Q9BVV7 248 aa1.43□□□□□ -2.18
LAPTM4A-202ENST00000483117 DISP1Q96F81 1524 aa1.43□□□□□ -2.18
LAPTM4A-202ENST00000483117 PLXNB1O43157 2135 aa1.43□□□□□ -2.18
LAPTM4A-202ENST00000483117 GLI3P10071 1580 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 MYLKQ15746 1914 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 CUL7Q14999 1698 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 USP54Q70EL1 1684 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 STRCQ7RTU9 1775 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 MYO16Q9Y6X6 1858 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 SCN9AQ15858 1988 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 IGKV3D-11A0A0A0MRZ8 115 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 TRAV14DV4A0A0A6YYC5 116 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 TCRBV3S1A0A5B6 114 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 C2orf70A6NJV1 201 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 B4DSR2 109 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 C5orf67F2Z3F1 127 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 M0R129 80 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 PITX3O75364 302 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 IGHV3-33P01772 117 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 IL5P05113 134 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 GYPBP06028 91 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 IGKV4-1P06312 121 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 COX7CP15954 63 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 NPC2P61916 151 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 C9orf153Q5TBE3 101 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 MIC13Q5XKP0 118 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 KRTAP26-1Q6PEX3 210 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 SLC25A26Q70HW3 274 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 FAM19A2Q8N3H0 131 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 TMEM242Q9NWH2 141 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 MYH7P12883 1935 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 221.5 ms