RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 H2AFB1P0C5Y9 115 aa14.94□□□□□ -0.02
SEC13-217ENST00000482647 PRR9Q5T870 116 aa14.94□□□□□ -0.02
SEC13-217ENST00000482647 RNASE8Q8TDE3 154 aaKnown RBP14.94□□□□□ -0.02
SEC13-217ENST00000482647 ATG101Q9BSB4 218 aa14.94□□□□□ -0.02
SEC13-217ENST00000482647 DYNC2H1Q8NCM8 4307 aaKnown RBP14.94□□□□□ -0.02
SEC13-217ENST00000482647 TRAV8-1A0A0A6YYK1 113 aa14.93□□□□□ -0.02
SEC13-217ENST00000482647 TRAV10A0A0B4J240 114 aa14.93□□□□□ -0.02
SEC13-217ENST00000482647 LYRM9A8MSI8 78 aa14.93□□□□□ -0.02
SEC13-217ENST00000482647 CYB561D1Q8N8Q1 229 aa14.93□□□□□ -0.02
SEC13-217ENST00000482647 C2CD4CQ8TF44 421 aa14.93□□□□□ -0.02
SEC13-217ENST00000482647 LINC00467Q9BRT7 94 aa14.93□□□□□ -0.02
SEC13-217ENST00000482647 PLAC8L1A1L4L8 177 aa14.92□□□□□ -0.02
SEC13-217ENST00000482647 FBLL1A6NHQ2 334 aaKnown RBP14.92□□□□□ -0.02
SEC13-217ENST00000482647 TREM1Q9NP99 234 aa14.92□□□□□ -0.02
SEC13-217ENST00000482647 TIMM8BQ9Y5J9 83 aaPredicted RBP14.92□□□□□ -0.02
SEC13-217ENST00000482647 CBY3A6NI87 242 aa14.91□□□□□ -0.02
SEC13-217ENST00000482647 RGS13O14921 159 aa14.91□□□□□ -0.02
SEC13-217ENST00000482647 EIF4E3Q8N5X7 224 aaKnown RBP14.91□□□□□ -0.02
SEC13-217ENST00000482647 SGK494Q96LW2 274 aa14.91□□□□□ -0.02
SEC13-217ENST00000482647 NDFIP1Q9BT67 221 aa14.91□□□□□ -0.02
SEC13-217ENST00000482647 ARL2-SNX15V9GYD0 113 aa14.91□□□□□ -0.02
SEC13-217ENST00000482647 DEFB131BA0A096LNP1 70 aa14.9□□□□□ -0.02
SEC13-217ENST00000482647 A0A1B0GV50 99 aa14.9□□□□□ -0.02
SEC13-217ENST00000482647 DAD1P61803 113 aa14.9□□□□□ -0.02
SEC13-217ENST00000482647 CST9LP1Q5W188 147 aa14.9□□□□□ -0.02
SEC13-217ENST00000482647 TMEM75Q8N9X5 138 aa14.9□□□□□ -0.02
SEC13-217ENST00000482647 ZNF680Q8NEM1 530 aa14.9□□□□□ -0.02
SEC13-217ENST00000482647 HIST1H2BAQ96A08 127 aa14.9□□□□□ -0.02
SEC13-217ENST00000482647 TCEAL7Q9BRU2 100 aa14.9□□□□□ -0.02
SEC13-217ENST00000482647 PSG8Q9UQ74 426 aa14.9□□□□□ -0.02
SEC13-217ENST00000482647 IGHV1OR15-1A0A075B7D0 117 aa14.89□□□□□ -0.03
SEC13-217ENST00000482647 SNURFLB1AK76 121 aa14.89□□□□□ -0.03
SEC13-217ENST00000482647 SULT1A2P50226 295 aa14.89□□□□□ -0.03
SEC13-217ENST00000482647 PPT1P50897 306 aa14.89□□□□□ -0.03
SEC13-217ENST00000482647 FLI1Q01543 452 aaPredicted RBP14.89□□□□□ -0.03
SEC13-217ENST00000482647 ANXA2RQ3ZCQ2 193 aa14.89□□□□□ -0.03
SEC13-217ENST00000482647 Q6AWC8 147 aa14.89□□□□□ -0.03
SEC13-217ENST00000482647 TVP23CQ96ET8 276 aa14.89□□□□□ -0.03
SEC13-217ENST00000482647 NOP10Q9NPE3 64 aaKnown RBP14.89□□□□□ -0.03
SEC13-217ENST00000482647 TRAV1-1A0A0B4J248 108 aa14.88□□□□□ -0.03
SEC13-217ENST00000482647 F6UZH7 168 aa14.88□□□□□ -0.03
SEC13-217ENST00000482647 TEX46H3BTG2 121 aa14.88□□□□□ -0.03
SEC13-217ENST00000482647 PEX7O00628 323 aa14.88□□□□□ -0.03
SEC13-217ENST00000482647 PAGE4O60829 102 aa14.88□□□□□ -0.03
SEC13-217ENST00000482647 IGLV2-11P01706 119 aa14.88□□□□□ -0.03
SEC13-217ENST00000482647 DEFB130BP0DP73 79 aa14.88□□□□□ -0.03
SEC13-217ENST00000482647 DEFB130AP0DP74 79 aa14.88□□□□□ -0.03
SEC13-217ENST00000482647 Q6ZQT7 251 aa14.88□□□□□ -0.03
SEC13-217ENST00000482647 PRNTQ86SH4 94 aa14.88□□□□□ -0.03
SEC13-217ENST00000482647 IGLL5B9A064 214 aa14.87□□□□□ -0.03
SEC13-217ENST00000482647 SAPCD1Q5SSQ6 148 aa14.87□□□□□ -0.03
SEC13-217ENST00000482647 LINC00479Q96M42 142 aa14.87□□□□□ -0.03
SEC13-217ENST00000482647 RYR3Q15413 4870 aa14.87□□□□□ -0.03
SEC13-217ENST00000482647 LCE6AA0A183 80 aa14.86□□□□□ -0.03
SEC13-217ENST00000482647 TCTAP57738 103 aa14.86□□□□□ -0.03
SEC13-217ENST00000482647 SACSQ9NZJ4 4579 aa14.85□□□□□ -0.03
SEC13-217ENST00000482647 TRAV34A0A0B4J273 112 aa14.85□□□□□ -0.03
SEC13-217ENST00000482647 TRAV21A0A0B4J279 112 aa14.85□□□□□ -0.03
SEC13-217ENST00000482647 NKX2-5P52952 324 aaPredicted RBP14.85□□□□□ -0.03
SEC13-217ENST00000482647 DAZ2Q13117 558 aaKnown RBP14.85□□□□□ -0.03
SEC13-217ENST00000482647 MUC21Q5SSG8 566 aa14.85□□□□□ -0.03
SEC13-217ENST00000482647 FAM159AQ6UWV7 190 aa14.85□□□□□ -0.03
SEC13-217ENST00000482647 GSN-AS1Q9NRJ2 163 aa14.85□□□□□ -0.03
SEC13-217ENST00000482647 RYR2Q92736 4967 aa14.84□□□□□ -0.03
SEC13-217ENST00000482647 HTN3P15516 51 aa14.84□□□□□ -0.03
SEC13-217ENST00000482647 ATP5G3P48201 142 aa14.84□□□□□ -0.03
SEC13-217ENST00000482647 IBA57Q5T440 356 aaKnown RBP14.84□□□□□ -0.03
SEC13-217ENST00000482647 C11orf72Q8NBR9 251 aa14.84□□□□□ -0.03
SEC13-217ENST00000482647 TP53TG3Q9ULZ0 132 aa14.84□□□□□ -0.03
SEC13-217ENST00000482647 CCL20P78556 96 aa14.83□□□□□ -0.04
SEC13-217ENST00000482647 SMUG1Q53HV7 270 aa14.83□□□□□ -0.04
SEC13-217ENST00000482647 FMC1Q96HJ9 113 aa14.83□□□□□ -0.04
SEC13-217ENST00000482647 C8orf49Q96NF6 230 aa14.83□□□□□ -0.04
SEC13-217ENST00000482647 MANBALQ9NQG1 85 aa14.83□□□□□ -0.04
SEC13-217ENST00000482647 NAGKQ9UJ70 344 aa14.83□□□□□ -0.04
SEC13-217ENST00000482647 LYSTQ99698 3801 aa14.83□□□□□ -0.04
SEC13-217ENST00000482647 IGHV4-4A0A075B6R2 117 aa14.82□□□□□ -0.04
SEC13-217ENST00000482647 GCGP01275 180 aa14.82□□□□□ -0.04
SEC13-217ENST00000482647 TDRG1Q3Y452 100 aa14.82□□□□□ -0.04
SEC13-217ENST00000482647 GNG13Q9P2W3 67 aa14.82□□□□□ -0.04
SEC13-217ENST00000482647 KLF12Q9Y4X4 402 aa14.82□□□□□ -0.04
SEC13-217ENST00000482647 TRGV11A0A075B6L2 103 aa14.81□□□□□ -0.04
SEC13-217ENST00000482647 TCL1AP56279 114 aa14.81□□□□□ -0.04
SEC13-217ENST00000482647 UBE2G1P62253 170 aa14.81□□□□□ -0.04
SEC13-217ENST00000482647 LINC00612Q8N6U2 182 aa14.81□□□□□ -0.04
SEC13-217ENST00000482647 FAM210BQ96KR6 192 aa14.81□□□□□ -0.04
SEC13-217ENST00000482647 ZFP30Q9Y2G7 519 aa14.81□□□□□ -0.04
SEC13-217ENST00000482647 GAGE12BA1L429 117 aa14.8□□□□□ -0.04
SEC13-217ENST00000482647 GAGE7O76087 117 aa14.8□□□□□ -0.04
SEC13-217ENST00000482647 ATP5G1P05496 136 aa14.8□□□□□ -0.04
SEC13-217ENST00000482647 PFN1P07737 140 aaKnown RBP14.8□□□□□ -0.04
SEC13-217ENST00000482647 GAGE12FP0CL80 117 aa14.8□□□□□ -0.04
SEC13-217ENST00000482647 GAGE12GP0CL81 117 aa14.8□□□□□ -0.04
SEC13-217ENST00000482647 GAGE12IP0CL82 117 aa14.8□□□□□ -0.04
SEC13-217ENST00000482647 ZNF80P51504 273 aaPredicted RBP14.8□□□□□ -0.04
SEC13-217ENST00000482647 ZNF415Q09FC8 603 aa14.8□□□□□ -0.04
SEC13-217ENST00000482647 TMEM183BQ1AE95 376 aa14.8□□□□□ -0.04
SEC13-217ENST00000482647 Q86TA4 180 aa14.8□□□□□ -0.04
SEC13-217ENST00000482647 TMEM183AQ8IXX5 376 aa14.8□□□□□ -0.04
SEC13-217ENST00000482647 KCNS1Q96KK3 526 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms