RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 RTL8AQ9BWD3 113 aa4.31□□□□□ -1.72
GAPVD1-217ENST00000479511 TLNRD1Q9H1K6 362 aa4.31□□□□□ -1.72
GAPVD1-217ENST00000479511 BANF2Q9H503 90 aa4.31□□□□□ -1.72
GAPVD1-217ENST00000479511 MED12LQ86YW9 2145 aa4.31□□□□□ -1.72
GAPVD1-217ENST00000479511 ROS1P08922 2347 aa4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 A0A0B4J2C4 111 aa4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 A0A0D9SG52 128 aa4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 MEIS3P1A6NDR6 274 aa4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 HMSDA8MTL9 139 aa4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 MCRIP1C9JLW8 97 aa4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 M0R233 179 aa4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 IFNA21P01568 189 aa4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 PMP2P02689 132 aa4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 CSN2P05814 226 aa4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 CBR1P16152 277 aa4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 PPP1CCP36873 323 aaKnown RBP4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 RBX1P62877 108 aa4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 MPV17LQ2QL34 196 aa4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 SLC36A1Q7Z2H8 476 aa4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 LYG2Q86SG7 212 aa4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 STARD4Q96DR4 205 aa4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 MUCL1Q96DR8 90 aa4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 CMSS1Q9BQ75 279 aaKnown RBP4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 SEC22CQ9BRL7 303 aa4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 ANAPC10Q9UM13 185 aa4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 TRAPPC1Q9Y5R8 145 aa4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 U3KQK5 164 aa4.3□□□□□ -1.72
GAPVD1-217ENST00000479511 HEATR5AQ86XA9 2040 aa4.29□□□□□ -1.72
GAPVD1-217ENST00000479511 PQLC2LA1A4F0 135 aa4.29□□□□□ -1.72
GAPVD1-217ENST00000479511 OR7C1O76099 320 aaPredicted RBP4.29□□□□□ -1.72
GAPVD1-217ENST00000479511 CNIH1O95406 144 aa4.29□□□□□ -1.72
GAPVD1-217ENST00000479511 RBM11P57052 281 aaKnown RBP4.29□□□□□ -1.72
GAPVD1-217ENST00000479511 TMEM33P57088 247 aa4.29□□□□□ -1.72
GAPVD1-217ENST00000479511 FGF12P61328 243 aa4.29□□□□□ -1.72
GAPVD1-217ENST00000479511 ARF6P62330 175 aa4.29□□□□□ -1.72
GAPVD1-217ENST00000479511 EIF5AP63241 154 aaKnown RBP4.29□□□□□ -1.72
GAPVD1-217ENST00000479511 DHRS2Q13268 280 aa4.29□□□□□ -1.72
GAPVD1-217ENST00000479511 SMCO1Q147U7 214 aa4.29□□□□□ -1.72
GAPVD1-217ENST00000479511 TAF9Q16594 264 aa4.29□□□□□ -1.72
GAPVD1-217ENST00000479511 Q6ZS49 121 aa4.29□□□□□ -1.72
GAPVD1-217ENST00000479511 SLC25A26Q70HW3 274 aa4.29□□□□□ -1.72
GAPVD1-217ENST00000479511 LRP11Q86VZ4 500 aa4.29□□□□□ -1.72
GAPVD1-217ENST00000479511 OR4S1Q8NGB4 309 aa4.29□□□□□ -1.72
GAPVD1-217ENST00000479511 OR5P3Q8WZ94 311 aa4.29□□□□□ -1.72
GAPVD1-217ENST00000479511 CYYR1Q96J86 154 aa4.29□□□□□ -1.72
GAPVD1-217ENST00000479511 KIAA1549Q9HCM3 1950 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 KANTRA0A1W2PQU2 76 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 C9orf170A2RU37 121 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 RFPL4AA6NLU0 287 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 RFPL4AL1F8VTS6 287 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 H3BQ85 93 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 LECT2O14960 151 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 DEGS1O15121 323 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 NOS1APO75052 506 aaPredicted RBP4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 SFT2D2O95562 160 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 CTSDP07339 412 aaPredicted RBP4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 OR5G3P0C626 314 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 ZNF728P0DKX0 622 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 S100A11P31949 105 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 OR8G1Q15617 311 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 FAM201AQ5SY85 155 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 C10orf91Q5T1B1 145 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 EIF5AL1Q6IS14 154 aaKnown RBP4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 TEX261Q6UWH6 196 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 C6orf201Q7Z4U5 140 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 STX12Q86Y82 276 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 BAP18Q8IXM2 172 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 C9orf62Q8N4C0 152 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 DEFB125Q8N687 156 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 OR13C8Q8NGS7 320 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 OR10K1Q8NGX5 313 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 NEK7Q8TDX7 302 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 CCL19Q99731 98 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 ZNF2Q9BSG1 426 aaPredicted RBP4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 NMES1Q9C002 83 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 WASHC3Q9Y3C0 194 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 PXMP4Q9Y6I8 212 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 U3KQ87 197 aa4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.28□□□□□ -1.72
GAPVD1-217ENST00000479511 DSCAMO60469 2012 aa4.28□□□□□ -1.73
GAPVD1-217ENST00000479511 FXYD6-FXYD2A0A087WZ82 144 aa4.27□□□□□ -1.73
GAPVD1-217ENST00000479511 TRAV40A0A0B4J280 105 aa4.27□□□□□ -1.73
GAPVD1-217ENST00000479511 LINC00862A6NCI5 91 aa4.27□□□□□ -1.73
GAPVD1-217ENST00000479511 GEMIN2O14893 280 aaKnown RBP4.27□□□□□ -1.73
GAPVD1-217ENST00000479511 SLC25A4P12235 298 aa4.27□□□□□ -1.73
GAPVD1-217ENST00000479511 ZNF14P17017 642 aaPredicted RBP4.27□□□□□ -1.73
GAPVD1-217ENST00000479511 PMAIP1Q13794 54 aa4.27□□□□□ -1.73
GAPVD1-217ENST00000479511 ZNF345Q14585 488 aa4.27□□□□□ -1.73
GAPVD1-217ENST00000479511 BATFQ16520 125 aa4.27□□□□□ -1.73
GAPVD1-217ENST00000479511 HAGHLQ6PII5 290 aaPredicted RBP4.27□□□□□ -1.73
GAPVD1-217ENST00000479511 ZNF680Q8NEM1 530 aa4.27□□□□□ -1.73
GAPVD1-217ENST00000479511 FXYD6Q9H0Q3 95 aa4.27□□□□□ -1.73
GAPVD1-217ENST00000479511 RASL12Q9NYN1 266 aa4.27□□□□□ -1.73
GAPVD1-217ENST00000479511 AK3Q9UIJ7 227 aa4.27□□□□□ -1.73
GAPVD1-217ENST00000479511 PKIGQ9Y2B9 76 aa4.27□□□□□ -1.73
GAPVD1-217ENST00000479511 CARHSP1Q9Y2V2 147 aaKnown RBP4.27□□□□□ -1.73
GAPVD1-217ENST00000479511 USF3Q68DE3 2245 aa4.27□□□□□ -1.73
GAPVD1-217ENST00000479511 IGLV4-60A0A075B6I1 120 aa4.26□□□□□ -1.73
GAPVD1-217ENST00000479511 IGKV1D-37A0A075B6S9 117 aa4.26□□□□□ -1.73
GAPVD1-217ENST00000479511 IQCF6A8MYZ5 107 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms