RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 PYDC2Q56P42 97 aa10.68□□□□□ -0.7
DDX56-210ENST00000479440 OR10J3Q5JRS4 329 aa10.68□□□□□ -0.7
DDX56-210ENST00000479440 Q6ZQT7 251 aa10.68□□□□□ -0.7
DDX56-210ENST00000479440 SCXQ7RTU7 201 aa10.68□□□□□ -0.7
DDX56-210ENST00000479440 EXOC3-AS1Q8N2X6 119 aa10.68□□□□□ -0.7
DDX56-210ENST00000479440 LRP1Q07954 4544 aaKnown RBP10.67□□□□□ -0.7
DDX56-210ENST00000479440 LOC100131303A0A0U1RQF7 123 aa10.67□□□□□ -0.7
DDX56-210ENST00000479440 ZNF138P52744 262 aa10.67□□□□□ -0.7
DDX56-210ENST00000479440 MUC21Q5SSG8 566 aa10.67□□□□□ -0.7
DDX56-210ENST00000479440 FAM122CQ6P4D5 195 aa10.67□□□□□ -0.7
DDX56-210ENST00000479440 OR4C5Q8NGB2 326 aa10.67□□□□□ -0.7
DDX56-210ENST00000479440 SLC39A9Q9NUM3 307 aa10.67□□□□□ -0.7
DDX56-210ENST00000479440 C7orf66A4D0T2 115 aa10.66□□□□□ -0.7
DDX56-210ENST00000479440 L7N2F9 121 aa10.66□□□□□ -0.7
DDX56-210ENST00000479440 IGHV3-30P01768 117 aa10.66□□□□□ -0.7
DDX56-210ENST00000479440 IGHV3-33P01772 117 aa10.66□□□□□ -0.7
DDX56-210ENST00000479440 IGHV3-30-3P0DP02 117 aa10.66□□□□□ -0.7
DDX56-210ENST00000479440 IGHV3-30-5P0DP03 117 aa10.66□□□□□ -0.7
DDX56-210ENST00000479440 PYYP10082 97 aa10.66□□□□□ -0.7
DDX56-210ENST00000479440 RPL29P47914 159 aaKnown RBP10.66□□□□□ -0.7
DDX56-210ENST00000479440 VAMP2P63027 116 aa10.66□□□□□ -0.7
DDX56-210ENST00000479440 TMEM183BQ1AE95 376 aa10.66□□□□□ -0.7
DDX56-210ENST00000479440 TMEM183AQ8IXX5 376 aa10.66□□□□□ -0.7
DDX56-210ENST00000479440 Q8TAT8 98 aa10.66□□□□□ -0.7
DDX56-210ENST00000479440 GPN1Q9HCN4 374 aaPredicted RBP10.66□□□□□ -0.7
DDX56-210ENST00000479440 UQCC1Q9NVA1 299 aa10.66□□□□□ -0.7
DDX56-210ENST00000479440 GSKIPQ9P0R6 139 aa10.66□□□□□ -0.7
DDX56-210ENST00000479440 WDR83OSQ9Y284 106 aa10.66□□□□□ -0.7
DDX56-210ENST00000479440 FAT3Q8TDW7 4589 aa10.66□□□□□ -0.7
DDX56-210ENST00000479440 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.65□□□□□ -0.7
DDX56-210ENST00000479440 RS1O15537 224 aa10.65□□□□□ -0.7
DDX56-210ENST00000479440 PFN1P07737 140 aaKnown RBP10.65□□□□□ -0.7
DDX56-210ENST00000479440 BAXQ07812 192 aa10.65□□□□□ -0.7
DDX56-210ENST00000479440 WFDC2Q14508 124 aa10.65□□□□□ -0.7
DDX56-210ENST00000479440 ZNF266Q14584 549 aa10.65□□□□□ -0.7
DDX56-210ENST00000479440 FAM159AQ6UWV7 190 aa10.65□□□□□ -0.7
DDX56-210ENST00000479440 BCL7BQ9BQE9 202 aa10.65□□□□□ -0.7
DDX56-210ENST00000479440 MRPS26Q9BYN8 205 aaKnown RBP10.65□□□□□ -0.7
DDX56-210ENST00000479440 SLIRPQ9GZT3 109 aaKnown RBP10.65□□□□□ -0.7
DDX56-210ENST00000479440 C20orf85Q9H1P6 137 aa10.65□□□□□ -0.7
DDX56-210ENST00000479440 UBE2L5PA0A1B0GUS4 154 aa10.64□□□□□ -0.71
DDX56-210ENST00000479440 BCAP31P51572 246 aa10.64□□□□□ -0.71
DDX56-210ENST00000479440 KRTAP10-4P60372 401 aaPredicted RBP10.64□□□□□ -0.71
DDX56-210ENST00000479440 BAK1Q16611 211 aa10.64□□□□□ -0.71
DDX56-210ENST00000479440 LELP1Q5T871 98 aa10.64□□□□□ -0.71
DDX56-210ENST00000479440 M0R2P5 195 aa10.63□□□□□ -0.71
DDX56-210ENST00000479440 MBPP02686 304 aaPredicted RBP10.63□□□□□ -0.71
DDX56-210ENST00000479440 GATA1P15976 413 aaPredicted RBP10.63□□□□□ -0.71
DDX56-210ENST00000479440 CAV2P51636 162 aa10.63□□□□□ -0.71
DDX56-210ENST00000479440 LECT2O14960 151 aa10.62□□□□□ -0.71
DDX56-210ENST00000479440 NOL3O60936 208 aaKnown RBP10.62□□□□□ -0.71
DDX56-210ENST00000479440 NDUFB6O95139 128 aa10.62□□□□□ -0.71
DDX56-210ENST00000479440 VWC2Q2TAL6 325 aa10.62□□□□□ -0.71
DDX56-210ENST00000479440 ACOT6Q3I5F7 207 aaPredicted RBP10.62□□□□□ -0.71
DDX56-210ENST00000479440 Q6AWC8 147 aa10.62□□□□□ -0.71
DDX56-210ENST00000479440 PRADC1Q9BSG0 188 aa10.62□□□□□ -0.71
DDX56-210ENST00000479440 CHAC1Q9BUX1 264 aa10.62□□□□□ -0.71
DDX56-210ENST00000479440 TRAV8-3A0A0A6YYJ7 113 aa10.61□□□□□ -0.71
DDX56-210ENST00000479440 RBAKDNA6NC62 111 aa10.61□□□□□ -0.71
DDX56-210ENST00000479440 CST7O76096 145 aa10.61□□□□□ -0.71
DDX56-210ENST00000479440 CSN1S1P47710 185 aa10.61□□□□□ -0.71
DDX56-210ENST00000479440 TMBIM6P55061 237 aa10.61□□□□□ -0.71
DDX56-210ENST00000479440 RHOHQ15669 191 aa10.61□□□□□ -0.71
DDX56-210ENST00000479440 TOR2AQ5JU69 321 aa10.61□□□□□ -0.71
DDX56-210ENST00000479440 SLC25A2Q9BXI2 301 aa10.61□□□□□ -0.71
DDX56-210ENST00000479440 NAGKQ9UJ70 344 aa10.61□□□□□ -0.71
DDX56-210ENST00000479440 LENEPQ9Y5L5 61 aa10.61□□□□□ -0.71
DDX56-210ENST00000479440 V9GYH0 126 aa10.61□□□□□ -0.71
DDX56-210ENST00000479440 IGHV3-16A0A0C4DH30 117 aa10.6□□□□□ -0.71
DDX56-210ENST00000479440 RBFOX3A6NFN3 312 aa10.6□□□□□ -0.71
DDX56-210ENST00000479440 FBLL1A6NHQ2 334 aaKnown RBP10.6□□□□□ -0.71
DDX56-210ENST00000479440 IGLV2-8P01709 118 aa10.6□□□□□ -0.71
DDX56-210ENST00000479440 CHAC2Q8WUX2 184 aa10.6□□□□□ -0.71
DDX56-210ENST00000479440 ATP5SQ99766 215 aa10.6□□□□□ -0.71
DDX56-210ENST00000479440 LSM5Q9Y4Y9 91 aaKnown RBP10.6□□□□□ -0.71
DDX56-210ENST00000479440 COX11Q9Y6N1 276 aa10.6□□□□□ -0.71
DDX56-210ENST00000479440 NAP1L6A6NFF2 107 aa10.59□□□□□ -0.71
DDX56-210ENST00000479440 NBEAP1P0C6P0 100 aa10.59□□□□□ -0.71
DDX56-210ENST00000479440 FGF7P21781 194 aa10.59□□□□□ -0.71
DDX56-210ENST00000479440 INPP1P49441 399 aa10.59□□□□□ -0.71
DDX56-210ENST00000479440 HBG1P69891 147 aa10.59□□□□□ -0.71
DDX56-210ENST00000479440 HBG2P69892 147 aa10.59□□□□□ -0.71
DDX56-210ENST00000479440 LINC01620Q4KN68 170 aa10.59□□□□□ -0.71
DDX56-210ENST00000479440 ATP6V0E2Q8NHE4 81 aa10.59□□□□□ -0.71
DDX56-210ENST00000479440 CIRBP-AS1Q8TBR5 109 aa10.59□□□□□ -0.71
DDX56-210ENST00000479440 SH3BGRL3Q9H299 93 aa10.59□□□□□ -0.71
DDX56-210ENST00000479440 FLVCR2Q9UPI3 526 aa10.59□□□□□ -0.71
DDX56-210ENST00000479440 TRBV6-4A0A1B0GX49 114 aa10.58□□□□□ -0.72
DDX56-210ENST00000479440 CIDEAO60543 219 aa10.58□□□□□ -0.72
DDX56-210ENST00000479440 PVALBP20472 110 aaPredicted RBP10.58□□□□□ -0.72
DDX56-210ENST00000479440 S100A11P31949 105 aa10.58□□□□□ -0.72
DDX56-210ENST00000479440 STX12Q86Y82 276 aa10.58□□□□□ -0.72
DDX56-210ENST00000479440 SLC25A29Q8N8R3 303 aa10.58□□□□□ -0.72
DDX56-210ENST00000479440 MITD1Q8WV92 249 aa10.58□□□□□ -0.72
DDX56-210ENST00000479440 GTSF1LQ9H1H1 148 aa10.58□□□□□ -0.72
DDX56-210ENST00000479440 OR51M1Q9H341 326 aa10.58□□□□□ -0.72
DDX56-210ENST00000479440 C5orf51A6NDU8 294 aa10.57□□□□□ -0.72
DDX56-210ENST00000479440 SULT1A1P50225 295 aa10.57□□□□□ -0.72
DDX56-210ENST00000479440 RMI2Q96E14 147 aa10.57□□□□□ -0.72
DDX56-210ENST00000479440 PHYHIPLQ96FC7 376 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms