RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 TVP23CQ96ET8 276 aa19.23■□□□□ 0.67
CCM2-211ENST00000478582 MANBALQ9NQG1 85 aa19.23■□□□□ 0.67
CCM2-211ENST00000478582 PSG8Q9UQ74 426 aa19.23■□□□□ 0.67
CCM2-211ENST00000478582 LOC102723971A0A1B0GUV8 181 aa19.22■□□□□ 0.67
CCM2-211ENST00000478582 F6UZH7 168 aa19.22■□□□□ 0.67
CCM2-211ENST00000478582 ATP5G3P48201 142 aa19.22■□□□□ 0.67
CCM2-211ENST00000478582 FLI1Q01543 452 aaPredicted RBP19.22■□□□□ 0.67
CCM2-211ENST00000478582 PYGO2Q9BRQ0 406 aa19.22■□□□□ 0.67
CCM2-211ENST00000478582 LINC00467Q9BRT7 94 aa19.22■□□□□ 0.67
CCM2-211ENST00000478582 PRM2P04554 102 aa19.21■□□□□ 0.67
CCM2-211ENST00000478582 BLOC1S1P78537 153 aa19.21■□□□□ 0.67
CCM2-211ENST00000478582 C11orf45Q8TAV5 145 aa19.21■□□□□ 0.67
CCM2-211ENST00000478582 SGK494Q96LW2 274 aa19.21■□□□□ 0.67
CCM2-211ENST00000478582 AZU1P20160 251 aa19.2■□□□□ 0.66
CCM2-211ENST00000478582 Q6AWC8 147 aa19.2■□□□□ 0.66
CCM2-211ENST00000478582 TREM1Q9NP99 234 aa19.2■□□□□ 0.66
CCM2-211ENST00000478582 ZNF493Q6ZR52 646 aa19.19■□□□□ 0.66
CCM2-211ENST00000478582 LINC00479Q96M42 142 aa19.19■□□□□ 0.66
CCM2-211ENST00000478582 NDFIP1Q9BT67 221 aa19.19■□□□□ 0.66
CCM2-211ENST00000478582 GNG13Q9P2W3 67 aa19.19■□□□□ 0.66
CCM2-211ENST00000478582 KLF12Q9Y4X4 402 aa19.19■□□□□ 0.66
CCM2-211ENST00000478582 C16orf74Q96GX8 76 aa19.18■□□□□ 0.66
CCM2-211ENST00000478582 TXNDC17Q9BRA2 123 aa19.18■□□□□ 0.66
CCM2-211ENST00000478582 PLAC8L1A1L4L8 177 aa19.17■□□□□ 0.66
CCM2-211ENST00000478582 CXorf65A6NEN9 183 aa19.17■□□□□ 0.66
CCM2-211ENST00000478582 C11orf94C9JXX5 98 aa19.17■□□□□ 0.66
CCM2-211ENST00000478582 HTN1P15515 57 aa19.17■□□□□ 0.66
CCM2-211ENST00000478582 SAPCD1Q5SSQ6 148 aa19.17■□□□□ 0.66
CCM2-211ENST00000478582 PRNTQ86SH4 94 aa19.17■□□□□ 0.66
CCM2-211ENST00000478582 LYPD6BQ8NI32 183 aa19.17■□□□□ 0.66
CCM2-211ENST00000478582 RNASE8Q8TDE3 154 aaKnown RBP19.17■□□□□ 0.66
CCM2-211ENST00000478582 TMEM263Q8WUH6 116 aaKnown RBP19.17■□□□□ 0.66
CCM2-211ENST00000478582 TRAV34A0A0B4J273 112 aa19.16■□□□□ 0.66
CCM2-211ENST00000478582 TRBV6-1A0A0K0K1D8 114 aa19.16■□□□□ 0.66
CCM2-211ENST00000478582 SPART-AS1P0CW21 52 aa19.16■□□□□ 0.66
CCM2-211ENST00000478582 EMP1P54849 157 aa19.16■□□□□ 0.66
CCM2-211ENST00000478582 FMC1Q96HJ9 113 aa19.16■□□□□ 0.66
CCM2-211ENST00000478582 DKK2Q9UBU2 259 aa19.16■□□□□ 0.66
CCM2-211ENST00000478582 CELA1Q9UNI1 258 aa19.16■□□□□ 0.66
CCM2-211ENST00000478582 SACSQ9NZJ4 4579 aa19.16■□□□□ 0.66
CCM2-211ENST00000478582 TEX48A0A1B0GUV7 120 aa19.15■□□□□ 0.66
CCM2-211ENST00000478582 NANOS2P60321 138 aaKnown RBP19.15■□□□□ 0.66
CCM2-211ENST00000478582 ANXA2RQ3ZCQ2 193 aa19.15■□□□□ 0.66
CCM2-211ENST00000478582 Q6ZQT7 251 aa19.15■□□□□ 0.66
CCM2-211ENST00000478582 EIF4E3Q8N5X7 224 aaKnown RBP19.15■□□□□ 0.66
CCM2-211ENST00000478582 IFNA1P01562 189 aa19.14■□□□□ 0.65
CCM2-211ENST00000478582 TEX261Q6UWH6 196 aa19.14■□□□□ 0.65
CCM2-211ENST00000478582 C2CD4CQ8TF44 421 aa19.14■□□□□ 0.65
CCM2-211ENST00000478582 C8orf49Q96NF6 230 aa19.14■□□□□ 0.65
CCM2-211ENST00000478582 IGHV1OR15-1A0A075B7D0 117 aa19.13■□□□□ 0.65
CCM2-211ENST00000478582 RGS13O14921 159 aa19.13■□□□□ 0.65
CCM2-211ENST00000478582 S100A9P06702 114 aaKnown RBP19.13■□□□□ 0.65
CCM2-211ENST00000478582 TAGLN2P37802 199 aaKnown RBP19.13■□□□□ 0.65
CCM2-211ENST00000478582 TMEM183BQ1AE95 376 aa19.13■□□□□ 0.65
CCM2-211ENST00000478582 FAM222AQ5U5X8 452 aa19.13■□□□□ 0.65
CCM2-211ENST00000478582 Q86TA4 180 aa19.13■□□□□ 0.65
CCM2-211ENST00000478582 ZFP30Q9Y2G7 519 aa19.13■□□□□ 0.65
CCM2-211ENST00000478582 TRAV21A0A0B4J279 112 aa19.12■□□□□ 0.65
CCM2-211ENST00000478582 AKR1C3P42330 323 aa19.12■□□□□ 0.65
CCM2-211ENST00000478582 SMUG1Q53HV7 270 aa19.12■□□□□ 0.65
CCM2-211ENST00000478582 SCO2A0A1W2PP80 73 aa19.11■□□□□ 0.65
CCM2-211ENST00000478582 LYRM9A8MSI8 78 aa19.11■□□□□ 0.65
CCM2-211ENST00000478582 BCL2P10415 239 aa19.11■□□□□ 0.65
CCM2-211ENST00000478582 UBE2G1P62253 170 aa19.11■□□□□ 0.65
CCM2-211ENST00000478582 C12orf74Q32Q52 190 aa19.11■□□□□ 0.65
CCM2-211ENST00000478582 COX8CQ7Z4L0 72 aa19.11■□□□□ 0.65
CCM2-211ENST00000478582 NUPR2A6NF83 97 aa19.1■□□□□ 0.65
CCM2-211ENST00000478582 MEF2BQ02080 365 aaPredicted RBP19.1■□□□□ 0.65
CCM2-211ENST00000478582 ZNF680Q8NEM1 530 aa19.1■□□□□ 0.65
CCM2-211ENST00000478582 C11orf52Q96A22 123 aa19.1■□□□□ 0.65
CCM2-211ENST00000478582 LYSTQ99698 3801 aa19.1■□□□□ 0.65
CCM2-211ENST00000478582 VAX2Q9UIW0 290 aa19.1■□□□□ 0.65
CCM2-211ENST00000478582 TIMM8BQ9Y5J9 83 aaPredicted RBP19.1■□□□□ 0.65
CCM2-211ENST00000478582 RYR2Q92736 4967 aa19.1■□□□□ 0.65
CCM2-211ENST00000478582 CBY3A6NI87 242 aa19.09■□□□□ 0.65
CCM2-211ENST00000478582 GCGP01275 180 aa19.09■□□□□ 0.65
CCM2-211ENST00000478582 LTAP01374 205 aa19.09■□□□□ 0.65
CCM2-211ENST00000478582 ZNF80P51504 273 aaPredicted RBP19.09■□□□□ 0.65
CCM2-211ENST00000478582 TDRG1Q3Y452 100 aa19.09■□□□□ 0.65
CCM2-211ENST00000478582 CEMP1Q6PRD7 247 aaPredicted RBP19.09■□□□□ 0.65
CCM2-211ENST00000478582 IBA57Q5T440 356 aaKnown RBP19.08■□□□□ 0.64
CCM2-211ENST00000478582 FAM159AQ6UWV7 190 aa19.08■□□□□ 0.64
CCM2-211ENST00000478582 C11orf72Q8NBR9 251 aa19.08■□□□□ 0.64
CCM2-211ENST00000478582 PHLDA1Q8WV24 401 aaPredicted RBP19.08■□□□□ 0.64
CCM2-211ENST00000478582 PDE6DO43924 150 aa19.07■□□□□ 0.64
CCM2-211ENST00000478582 PFN1P07737 140 aaKnown RBP19.07■□□□□ 0.64
CCM2-211ENST00000478582 MUC21Q5SSG8 566 aa19.07■□□□□ 0.64
CCM2-211ENST00000478582 SNURFLB1AK76 121 aa19.06■□□□□ 0.64
CCM2-211ENST00000478582 DAZ2Q13117 558 aaKnown RBP19.06■□□□□ 0.64
CCM2-211ENST00000478582 Q6ZTC4 211 aa19.06■□□□□ 0.64
CCM2-211ENST00000478582 TP53TG3Q9ULZ0 132 aa19.06■□□□□ 0.64
CCM2-211ENST00000478582 NOP10Q9NPE3 64 aaKnown RBP19.05■□□□□ 0.64
CCM2-211ENST00000478582 KLK5Q9Y337 293 aaPredicted RBP19.05■□□□□ 0.64
CCM2-211ENST00000478582 ZNF767PQ75MW2 155 aa19.04■□□□□ 0.64
CCM2-211ENST00000478582 TMEM183AQ8IXX5 376 aa19.04■□□□□ 0.64
CCM2-211ENST00000478582 KCNS1Q96KK3 526 aa19.04■□□□□ 0.64
CCM2-211ENST00000478582 GSN-AS1Q9NRJ2 163 aa19.04■□□□□ 0.64
CCM2-211ENST00000478582 TRAV10A0A0B4J240 114 aa19.03■□□□□ 0.64
CCM2-211ENST00000478582 RBFOX3A6NFN3 312 aa19.03■□□□□ 0.64
CCM2-211ENST00000478582 FABP5P3A8MUU1 101 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms