RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 OR5C1Q8NGR4 320 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 FAM213BQ8TBF2 198 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 LRRC29Q8WV35 223 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 AQP3Q92482 292 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 H1FXQ92522 213 aaKnown RBP1.73□□□□□ -2.13
XRN1-211ENST00000477237 OR8B2Q96RD0 313 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 HDHD3Q9BSH5 251 aaPredicted RBP1.73□□□□□ -2.13
XRN1-211ENST00000477237 CHAC1Q9BUX1 264 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 ZNF702PQ9H963 129 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 ZNF286AQ9HBT8 521 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 SPRR3Q9UBC9 169 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 CKLFQ9UBR5 152 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 DDX60LQ5H9U9 1706 aaKnown RBP1.73□□□□□ -2.13
XRN1-211ENST00000477237 MIA3Q5JRA6 1907 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 HEATR5AQ86XA9 2040 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 DOCK8Q8NF50 2099 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 NYNRINQ9P2P1 1898 aaKnown RBP1.72□□□□□ -2.13
XRN1-211ENST00000477237 TRBV20OR9-2A0A075B6H5 130 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 IGHV6-1A0A0B4J1U7 121 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 LOC285095A0A1B0GVY8 99 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 BUB1B-PAK6H3BSN5 160 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 K7ERJ3 54 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 HCRTO43612 131 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 SERF1AO75920 110 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 IGLV3-27P01718 113 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 HBDP02042 147 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 INAFM2P0DMQ5 153 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 PIPP12273 146 aaPredicted RBP1.72□□□□□ -2.13
XRN1-211ENST00000477237 MDKP21741 143 aaPredicted RBP1.72□□□□□ -2.13
XRN1-211ENST00000477237 FAUP35544 74 aaKnown RBP1.72□□□□□ -2.13
XRN1-211ENST00000477237 EFNA4P52798 201 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 ATP5EP56381 51 aaPredicted RBP1.72□□□□□ -2.13
XRN1-211ENST00000477237 KRTDAPP60985 99 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 ERVK-16P61578 105 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 RPL23P62829 140 aaKnown RBP1.72□□□□□ -2.13
XRN1-211ENST00000477237 RPS21P63220 83 aaKnown RBP1.72□□□□□ -2.13
XRN1-211ENST00000477237 HBBP68871 147 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 SS18Q15532 418 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 IL17AQ16552 155 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 MIC13Q5XKP0 118 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 TIFABQ6ZNK6 161 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 TMEM136Q6ZRR5 245 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 MARCH3Q86UD3 253 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 MDP1Q86V88 176 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 C17orf82Q86X59 251 aaPredicted RBP1.72□□□□□ -2.13
XRN1-211ENST00000477237 TOMM5Q8N4H5 51 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 Q8N8P6 123 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 RFESDQ8TAC1 157 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 GEMIN6Q8WXD5 167 aaKnown RBP1.72□□□□□ -2.13
XRN1-211ENST00000477237 FAM3DQ96BQ1 224 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 VSIG2Q96IQ7 327 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 TIMM17AQ99595 171 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 SLC25A15Q9Y619 301 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 SELENOKQ9Y6D0 94 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 V9GY05 133 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 LTBP2Q14767 1821 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 THSD7BQ9C0I4 1608 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 NRXN3Q9Y4C0 1643 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 EXPH5Q8NEV8 1989 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 MED12LQ86YW9 2145 aa1.72□□□□□ -2.13
XRN1-211ENST00000477237 PHF3Q92576 2039 aaKnown RBP1.71□□□□□ -2.14
XRN1-211ENST00000477237 TRAV17A0A0B4J275 112 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 UBE2L5PA0A1B0GUS4 154 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 IBA57-AS1B1ANH7 110 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 NXPH4O95158 308 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 SLC25A14O95258 325 aaPredicted RBP1.71□□□□□ -2.14
XRN1-211ENST00000477237 HLA-DQA1P01909 254 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 APCSP02743 223 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 ASAH2BP0C7U1 165 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 SMIM13P0DJ93 91 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 RNASE4P34096 147 aaKnown RBP1.71□□□□□ -2.14
XRN1-211ENST00000477237 DYNLT3P51808 116 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 ZNF138P52744 262 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 CRYBA2P53672 197 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 MFAP2P55001 183 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 DSCR4P56555 118 aaPredicted RBP1.71□□□□□ -2.14
XRN1-211ENST00000477237 UBE2G1P62253 170 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 SNRPFP62306 86 aaKnown RBP1.71□□□□□ -2.14
XRN1-211ENST00000477237 UBE2BP63146 152 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 UBE2L3P68036 154 aaKnown RBP1.71□□□□□ -2.14
XRN1-211ENST00000477237 CCL8P80075 99 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 EBLN2Q6P2I7 272 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 C7orf65Q6ZTY9 151 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 C5orf38Q86SI9 138 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 GPHB5Q86YW7 130 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 NKAPP1Q8N9T2 125 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 LINC01555Q8NAE3 123 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 CSNK1G2-AS1Q8NCQ2 148 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 SMIM4Q8WVI0 70 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 RNASE6Q93091 150 aaKnown RBP1.71□□□□□ -2.14
XRN1-211ENST00000477237 DIRC1Q969H9 104 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 GABARAPL3Q9BY60 117 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 CST11Q9H112 138 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 CXCL16Q9H2A7 254 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 SLC25A22Q9H936 323 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 ZNF492Q9P255 531 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 DDX60Q8IY21 1712 aaKnown RBP1.71□□□□□ -2.14
XRN1-211ENST00000477237 PLXNA1Q9UIW2 1896 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 SCN7AQ01118 1682 aa1.71□□□□□ -2.14
XRN1-211ENST00000477237 ZNF236Q9UL36 1845 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms