RNA–Protein interactions for RNA: ENST00000476729.5

FLOT1-209, Transcript of flotillin 1, humanhuman

TSL 2

Gene FLOT1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-209ENST00000476729 FAM213BQ8TBF2 198 aa10.59□□□□□ -0.71
FLOT1-209ENST00000476729 TREM1Q9NP99 234 aa10.59□□□□□ -0.71
FLOT1-209ENST00000476729 TRAV5A0A0B4J249 113 aa10.58□□□□□ -0.72
FLOT1-209ENST00000476729 TRAV12-3A0A0B4J271 114 aa10.58□□□□□ -0.72
FLOT1-209ENST00000476729 TMEM218A2RU14 115 aa10.58□□□□□ -0.72
FLOT1-209ENST00000476729 C17orf112F2Z3M2 114 aa10.58□□□□□ -0.72
FLOT1-209ENST00000476729 H3BQ15 152 aa10.58□□□□□ -0.72
FLOT1-209ENST00000476729 MPDU1O75352 247 aa10.58□□□□□ -0.72
FLOT1-209ENST00000476729 C10orf113Q5VZT2 155 aa10.58□□□□□ -0.72
FLOT1-209ENST00000476729 WDR61Q9GZS3 305 aaKnown RBP10.58□□□□□ -0.72
FLOT1-209ENST00000476729 SH3BGRL3Q9H299 93 aa10.58□□□□□ -0.72
FLOT1-209ENST00000476729 TMPRSS5Q9H3S3 457 aa10.58□□□□□ -0.72
FLOT1-209ENST00000476729 KCNIP2Q9NS61 270 aa10.58□□□□□ -0.72
FLOT1-209ENST00000476729 UQCC1Q9NVA1 299 aa10.58□□□□□ -0.72
FLOT1-209ENST00000476729 H2AFB1P0C5Y9 115 aa10.57□□□□□ -0.72
FLOT1-209ENST00000476729 CT45A10P0DMU9 189 aa10.57□□□□□ -0.72
FLOT1-209ENST00000476729 IGLC2P0DOY2 106 aa10.57□□□□□ -0.72
FLOT1-209ENST00000476729 KRTAP10-2P60368 255 aa10.57□□□□□ -0.72
FLOT1-209ENST00000476729 VWC2Q2TAL6 325 aa10.57□□□□□ -0.72
FLOT1-209ENST00000476729 ZNF503Q96F45 646 aa10.57□□□□□ -0.72
FLOT1-209ENST00000476729 Q9H3A6 140 aa10.57□□□□□ -0.72
FLOT1-209ENST00000476729 SCRT2Q9NQ03 307 aa10.57□□□□□ -0.72
FLOT1-209ENST00000476729 ZNF586Q9NXT0 402 aa10.57□□□□□ -0.72
FLOT1-209ENST00000476729 PXMP4Q9Y6I8 212 aa10.57□□□□□ -0.72
FLOT1-209ENST00000476729 TRAV1-1A0A0B4J248 108 aa10.56□□□□□ -0.72
FLOT1-209ENST00000476729 LEPP41159 167 aa10.56□□□□□ -0.72
FLOT1-209ENST00000476729 Q6ZTI0 123 aa10.56□□□□□ -0.72
FLOT1-209ENST00000476729 Q8N1X5 172 aa10.56□□□□□ -0.72
FLOT1-209ENST00000476729 SVBPQ8N300 66 aa10.56□□□□□ -0.72
FLOT1-209ENST00000476729 UPK3BQ9BT76 320 aa10.56□□□□□ -0.72
FLOT1-209ENST00000476729 SEC11CQ9BY50 192 aa10.56□□□□□ -0.72
FLOT1-209ENST00000476729 MRPS16Q9Y3D3 137 aaKnown RBP10.56□□□□□ -0.72
FLOT1-209ENST00000476729 APOC3P02656 99 aa10.55□□□□□ -0.72
FLOT1-209ENST00000476729 MIC13Q5XKP0 118 aa10.55□□□□□ -0.72
FLOT1-209ENST00000476729 DNAJC4Q9NNZ3 241 aa10.55□□□□□ -0.72
FLOT1-209ENST00000476729 CARHSP1Q9Y2V2 147 aaKnown RBP10.55□□□□□ -0.72
FLOT1-209ENST00000476729 TRGV2A0A075B6R0 118 aa10.54□□□□□ -0.72
FLOT1-209ENST00000476729 UBE2L5PA0A1B0GUS4 154 aa10.54□□□□□ -0.72
FLOT1-209ENST00000476729 NPIPB6E9PJ23 425 aa10.54□□□□□ -0.72
FLOT1-209ENST00000476729 F8W036 122 aa10.54□□□□□ -0.72
FLOT1-209ENST00000476729 ERCC8Q13216 396 aa10.54□□□□□ -0.72
FLOT1-209ENST00000476729 RAB31Q13636 194 aa10.54□□□□□ -0.72
FLOT1-209ENST00000476729 C10orf91Q5T1B1 145 aa10.54□□□□□ -0.72
FLOT1-209ENST00000476729 PYGO2Q9BRQ0 406 aa10.54□□□□□ -0.72
FLOT1-209ENST00000476729 GSN-AS1Q9NRJ2 163 aa10.54□□□□□ -0.72
FLOT1-209ENST00000476729 A0A1W2PPQ1 181 aa10.53□□□□□ -0.72
FLOT1-209ENST00000476729 H3BNG1 76 aa10.53□□□□□ -0.72
FLOT1-209ENST00000476729 M0R3E3 92 aa10.53□□□□□ -0.72
FLOT1-209ENST00000476729 SNAPINO95295 136 aa10.53□□□□□ -0.72
FLOT1-209ENST00000476729 FGF7P21781 194 aa10.53□□□□□ -0.72
FLOT1-209ENST00000476729 TAGLN2P37802 199 aaKnown RBP10.53□□□□□ -0.72
FLOT1-209ENST00000476729 DAZ2Q13117 558 aaKnown RBP10.53□□□□□ -0.72
FLOT1-209ENST00000476729 GUK1Q16774 197 aa10.53□□□□□ -0.72
FLOT1-209ENST00000476729 VSIG2Q96IQ7 327 aa10.53□□□□□ -0.72
FLOT1-209ENST00000476729 ODF3Q96PU9 254 aa10.53□□□□□ -0.72
FLOT1-209ENST00000476729 EIF5A2Q9GZV4 153 aaKnown RBP10.53□□□□□ -0.72
FLOT1-209ENST00000476729 A0A096LPF7 62 aa10.52□□□□□ -0.73
FLOT1-209ENST00000476729 TRGV1A0A0A0MS02 117 aa10.52□□□□□ -0.73
FLOT1-209ENST00000476729 C7orf71A4D174 169 aa10.52□□□□□ -0.73
FLOT1-209ENST00000476729 IFNA1P01562 189 aa10.52□□□□□ -0.73
FLOT1-209ENST00000476729 LINC00315P59091 139 aa10.52□□□□□ -0.73
FLOT1-209ENST00000476729 OR1L4Q8NGR5 311 aa10.52□□□□□ -0.73
FLOT1-209ENST00000476729 SFT2D1Q8WV19 159 aa10.52□□□□□ -0.73
FLOT1-209ENST00000476729 MBD3L1Q8WWY6 194 aa10.52□□□□□ -0.73
FLOT1-209ENST00000476729 WDR83OSQ9Y284 106 aa10.52□□□□□ -0.73
FLOT1-209ENST00000476729 SFTA3P0C7M3 94 aa10.51□□□□□ -0.73
FLOT1-209ENST00000476729 BTF3P20290 206 aaKnown RBP10.51□□□□□ -0.73
FLOT1-209ENST00000476729 BTN1A1Q13410 526 aa10.51□□□□□ -0.73
FLOT1-209ENST00000476729 ACOT6Q3I5F7 207 aaPredicted RBP10.51□□□□□ -0.73
FLOT1-209ENST00000476729 SLC39A9Q9NUM3 307 aa10.51□□□□□ -0.73
FLOT1-209ENST00000476729 RBFOX3A6NFN3 312 aa10.5□□□□□ -0.73
FLOT1-209ENST00000476729 IGHV3-53P01767 116 aa10.5□□□□□ -0.73
FLOT1-209ENST00000476729 SLC25A5P05141 298 aaKnown RBP10.5□□□□□ -0.73
FLOT1-209ENST00000476729 FUSP35637 526 aaKnown RBP eCLIP10.5□□□□□ -0.73
FLOT1-209ENST00000476729 FHITP49789 147 aa10.5□□□□□ -0.73
FLOT1-209ENST00000476729 C11orf72Q8NBR9 251 aa10.5□□□□□ -0.73
FLOT1-209ENST00000476729 PFDN5Q99471 154 aa10.5□□□□□ -0.73
FLOT1-209ENST00000476729 NPCDR1Q9BY65 106 aa10.5□□□□□ -0.73
FLOT1-209ENST00000476729 ACTR3CQ9C0K3 210 aaPredicted RBP10.5□□□□□ -0.73
FLOT1-209ENST00000476729 FUT9Q9Y231 359 aa10.5□□□□□ -0.73
FLOT1-209ENST00000476729 KLF12Q9Y4X4 402 aa10.5□□□□□ -0.73
FLOT1-209ENST00000476729 TRBV19A0A075B6N1 114 aa10.49□□□□□ -0.73
FLOT1-209ENST00000476729 NDUFS6O75380 124 aaKnown RBP10.49□□□□□ -0.73
FLOT1-209ENST00000476729 PYYP10082 97 aa10.49□□□□□ -0.73
FLOT1-209ENST00000476729 RNASE4P34096 147 aaKnown RBP10.49□□□□□ -0.73
FLOT1-209ENST00000476729 PPT1P50897 306 aa10.49□□□□□ -0.73
FLOT1-209ENST00000476729 SUN5Q8TC36 379 aa10.49□□□□□ -0.73
FLOT1-209ENST00000476729 BLNKQ8WV28 456 aa10.49□□□□□ -0.73
FLOT1-209ENST00000476729 MRPL53Q96EL3 112 aaKnown RBP10.49□□□□□ -0.73
FLOT1-209ENST00000476729 NKX6-2Q9C056 277 aaPredicted RBP10.49□□□□□ -0.73
FLOT1-209ENST00000476729 CTXND1A0A1B0GTU2 59 aa10.48□□□□□ -0.73
FLOT1-209ENST00000476729 KLLNB2CW77 178 aa10.48□□□□□ -0.73
FLOT1-209ENST00000476729 ZNF253O75346 499 aa10.48□□□□□ -0.73
FLOT1-209ENST00000476729 ZNF324O75467 553 aaPredicted RBP10.48□□□□□ -0.73
FLOT1-209ENST00000476729 NDUFB4O95168 129 aa10.48□□□□□ -0.73
FLOT1-209ENST00000476729 HIST1H1EP10412 219 aaKnown RBP10.48□□□□□ -0.73
FLOT1-209ENST00000476729 RPL29P47914 159 aaKnown RBP10.48□□□□□ -0.73
FLOT1-209ENST00000476729 SRSF3P84103 164 aaKnown RBP10.48□□□□□ -0.73
FLOT1-209ENST00000476729 KHDC3LQ587J8 217 aa10.48□□□□□ -0.73
FLOT1-209ENST00000476729 ZNF506Q5JVG8 444 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms