RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 PRR9Q5T870 116 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 TMEM14EPQ6UXP3 125 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 Q6ZQT7 251 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 ZFAND2AQ8N6M9 145 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 MRPL53Q96EL3 112 aaKnown RBP3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 DIRAS2Q96HU8 199 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 MGST2Q99735 147 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 PSENENQ9NZ42 101 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 CCDC59Q9P031 241 aaKnown RBP3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 MGAT4CQ9UBM8 478 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 RCL1Q9Y2P8 373 aaKnown RBP3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 IGHV1OR15-1A0A075B7D0 117 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 TRAV5A0A0B4J249 113 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 TRGV4A0A0C4DH28 118 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 IGHV3-38A0A0C4DH36 116 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 IBA57-AS1B1ANH7 110 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 ORM1P02763 201 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 NMBP08949 121 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 SMIM18P0DKX4 95 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 RNASE4P34096 147 aaKnown RBP3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 FAUP35544 74 aaKnown RBP3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 TIRAPP58753 221 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 ZNF415Q09FC8 603 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 ARL16Q0P5N6 197 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 WFDC2Q14508 124 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 SPCS2Q15005 226 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 LINC01556Q5JQF7 62 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 C10orf113Q5VZT2 155 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 SCXQ7RTU7 201 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 OR10P1Q8NGE3 313 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 OR10G4Q8NGN3 311 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 PCNPQ8WW12 178 aaKnown RBP3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 ZNF479Q96JC4 524 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 SMIM8Q96KF7 97 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 LINC00477Q96M19 166 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 SOSTQ9BQB4 213 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 TXNDC17Q9BRA2 123 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 AGPAT4-IT1Q9H0P7 198 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 Q9HAA7 133 aa3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 RSL24D1Q9UHA3 163 aaKnown RBP3.4□□□□□ -1.87
SNRNP40-204ENST00000474025 TRBV19A0A075B6N1 114 aa3.39□□□□□ -1.87
SNRNP40-204ENST00000474025 IGKV2-40A0A087WW87 121 aaPredicted RBP3.39□□□□□ -1.87
SNRNP40-204ENST00000474025 LOC100131303A0A0U1RQF7 123 aa3.39□□□□□ -1.87
SNRNP40-204ENST00000474025 C9JCJ5 164 aa3.39□□□□□ -1.87
SNRNP40-204ENST00000474025 NDUFB4O95168 129 aa3.39□□□□□ -1.87
SNRNP40-204ENST00000474025 IGKV2D-40P01614 121 aaPredicted RBP3.39□□□□□ -1.87
SNRNP40-204ENST00000474025 GPX1P07203 203 aa3.39□□□□□ -1.87
SNRNP40-204ENST00000474025 PDE6HQ13956 83 aa3.39□□□□□ -1.87
SNRNP40-204ENST00000474025 GAGE13Q4V321 117 aa3.39□□□□□ -1.87
SNRNP40-204ENST00000474025 MIC13Q5XKP0 118 aa3.39□□□□□ -1.87
SNRNP40-204ENST00000474025 C9orf47Q6ZRZ4 202 aa3.39□□□□□ -1.87
SNRNP40-204ENST00000474025 MCFD2Q8NI22 146 aa3.39□□□□□ -1.87
SNRNP40-204ENST00000474025 RAB2BQ8WUD1 216 aa3.39□□□□□ -1.87
SNRNP40-204ENST00000474025 BLNKQ8WV28 456 aa3.39□□□□□ -1.87
SNRNP40-204ENST00000474025 SLC25A21Q9BQT8 299 aaPredicted RBP3.39□□□□□ -1.87
SNRNP40-204ENST00000474025 GGACTQ9BVM4 153 aa3.39□□□□□ -1.87
SNRNP40-204ENST00000474025 DNAJC4Q9NNZ3 241 aa3.39□□□□□ -1.87
SNRNP40-204ENST00000474025 PRELID1Q9Y255 219 aa3.39□□□□□ -1.87
SNRNP40-204ENST00000474025 TRAV4A0A0B4J268 109 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 C9orf170A2RU37 121 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 FABP12A6NFH5 140 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 HIST1H1EP10412 219 aaKnown RBP3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 TNFSF8P32971 234 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 CAMLGP49069 296 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 PPT1P50897 306 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 TAS2R30P59541 319 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 AP3S2P59780 193 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 UBE2MP61081 183 aaKnown RBP3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 LAGE3Q14657 143 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 ZNF846Q147U1 533 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 LINC01620Q4KN68 170 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 MUC21Q5SSG8 566 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 TMEM78Q5T7P6 136 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 Q6ZRG5 221 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 SH2D6Q7Z4S9 175 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 NRARPQ7Z6K4 114 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 EXOC3-AS1Q8N2X6 119 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 NHLRC2Q8NBF2 726 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 OR1L4Q8NGR5 311 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 Q8TAT8 98 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 DYNC2LI1Q8TCX1 351 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 RASL10AQ92737 203 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 PFDN5Q99471 154 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 CHAC1Q9BUX1 264 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 SRRQ9GZT4 340 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 SLC25A31Q9H0C2 315 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 TMEM14CQ9P0S9 112 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 ZNF492Q9P255 531 aa3.38□□□□□ -1.87
SNRNP40-204ENST00000474025 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 TRBV7-9A0A0J9YWB2 115 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 C7orf66A4D0T2 115 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 B5MCH6 92 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 LECT2O14960 151 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 RS1O15537 224 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 IGHV3-30P01768 117 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 IGHV3-33P01772 117 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 IGHV3-30-3P0DP02 117 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 IGHV3-30-5P0DP03 117 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 PYYP10082 97 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 GATA1P15976 413 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 441 ms