RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 LENEPQ9Y5L5 61 aa9.44□□□□□ -0.9
TPM3-216ENST00000473036 TRBV7-9A0A0J9YWB2 115 aa9.43□□□□□ -0.9
TPM3-216ENST00000473036 DIRC3C9JPN6 131 aa9.43□□□□□ -0.9
TPM3-216ENST00000473036 NPIPB6E9PJ23 425 aa9.43□□□□□ -0.9
TPM3-216ENST00000473036 PEX7O00628 323 aa9.43□□□□□ -0.9
TPM3-216ENST00000473036 TAS2R60P59551 318 aa9.43□□□□□ -0.9
TPM3-216ENST00000473036 UBE2G1P62253 170 aa9.43□□□□□ -0.9
TPM3-216ENST00000473036 SAPCD1Q5SSQ6 148 aa9.43□□□□□ -0.9
TPM3-216ENST00000473036 PCNPQ8WW12 178 aaKnown RBP9.43□□□□□ -0.9
TPM3-216ENST00000473036 C11orf52Q96A22 123 aa9.43□□□□□ -0.9
TPM3-216ENST00000473036 FAM19A4Q96LR4 140 aa9.43□□□□□ -0.9
TPM3-216ENST00000473036 IGF2BP2-AS1Q96M15 143 aa9.43□□□□□ -0.9
TPM3-216ENST00000473036 VGLL1Q99990 258 aa9.43□□□□□ -0.9
TPM3-216ENST00000473036 C1QTNF4Q9BXJ3 329 aa9.43□□□□□ -0.9
TPM3-216ENST00000473036 AGPAT4-IT1Q9H0P7 198 aa9.43□□□□□ -0.9
TPM3-216ENST00000473036 PPP1R14DQ9NXH3 145 aa9.43□□□□□ -0.9
TPM3-216ENST00000473036 IGHV3OR16-12A0A075B7B8 117 aa9.42□□□□□ -0.9
TPM3-216ENST00000473036 IGKV2-40A0A087WW87 121 aaPredicted RBP9.42□□□□□ -0.9
TPM3-216ENST00000473036 TRBV6-1A0A0K0K1D8 114 aa9.42□□□□□ -0.9
TPM3-216ENST00000473036 IGKV2D-40P01614 121 aaPredicted RBP9.42□□□□□ -0.9
TPM3-216ENST00000473036 C9orf47Q6ZRZ4 202 aa9.42□□□□□ -0.9
TPM3-216ENST00000473036 TMEM75Q8N9X5 138 aa9.42□□□□□ -0.9
TPM3-216ENST00000473036 SMIM12Q96EX1 92 aa9.42□□□□□ -0.9
TPM3-216ENST00000473036 NDFIP1Q9BT67 221 aa9.42□□□□□ -0.9
TPM3-216ENST00000473036 TREM1Q9NP99 234 aa9.42□□□□□ -0.9
TPM3-216ENST00000473036 BIN3Q9NQY0 253 aa9.42□□□□□ -0.9
TPM3-216ENST00000473036 CELA1Q9UNI1 258 aa9.42□□□□□ -0.9
TPM3-216ENST00000473036 ZFP30Q9Y2G7 519 aa9.42□□□□□ -0.9
TPM3-216ENST00000473036 KLF12Q9Y4X4 402 aa9.42□□□□□ -0.9
TPM3-216ENST00000473036 AMBPP02760 352 aa9.41□□□□□ -0.9
TPM3-216ENST00000473036 MIFP14174 115 aa9.41□□□□□ -0.9
TPM3-216ENST00000473036 TSPOP30536 169 aa9.41□□□□□ -0.9
TPM3-216ENST00000473036 AKR1C3P42330 323 aa9.41□□□□□ -0.9
TPM3-216ENST00000473036 ATP5G3P48201 142 aa9.41□□□□□ -0.9
TPM3-216ENST00000473036 NANOS2P60321 138 aaKnown RBP9.41□□□□□ -0.9
TPM3-216ENST00000473036 GOLT1AQ6ZVE7 132 aa9.41□□□□□ -0.9
TPM3-216ENST00000473036 COMMD7Q86VX2 200 aa9.41□□□□□ -0.9
TPM3-216ENST00000473036 ODF3Q96PU9 254 aa9.41□□□□□ -0.9
TPM3-216ENST00000473036 NEU1Q99519 415 aa9.41□□□□□ -0.9
TPM3-216ENST00000473036 AZU1P20160 251 aa9.4□□□□□ -0.9
TPM3-216ENST00000473036 ZNF138P52744 262 aa9.4□□□□□ -0.9
TPM3-216ENST00000473036 TMEM183BQ1AE95 376 aa9.4□□□□□ -0.9
TPM3-216ENST00000473036 SOHLH1Q5JUK2 328 aa9.4□□□□□ -0.9
TPM3-216ENST00000473036 PRR9Q5T870 116 aa9.4□□□□□ -0.9
TPM3-216ENST00000473036 GFI1BQ5VTD9 330 aa9.4□□□□□ -0.9
TPM3-216ENST00000473036 Q6ZQT7 251 aa9.4□□□□□ -0.9
TPM3-216ENST00000473036 ZNF705GA8MUZ8 300 aaPredicted RBP9.39□□□□□ -0.91
TPM3-216ENST00000473036 SRP19P09132 144 aaKnown RBP9.39□□□□□ -0.91
TPM3-216ENST00000473036 CDKN1BP46527 198 aa9.39□□□□□ -0.91
TPM3-216ENST00000473036 FLI1Q01543 452 aaPredicted RBP9.39□□□□□ -0.91
TPM3-216ENST00000473036 C2CD4CQ8TF44 421 aa9.39□□□□□ -0.91
TPM3-216ENST00000473036 SCO2A0A1W2PP80 73 aa9.38□□□□□ -0.91
TPM3-216ENST00000473036 PLAC8L1A1L4L8 177 aa9.38□□□□□ -0.91
TPM3-216ENST00000473036 J3KRW8 73 aa9.38□□□□□ -0.91
TPM3-216ENST00000473036 INSP01308 110 aa9.38□□□□□ -0.91
TPM3-216ENST00000473036 LEPP41159 167 aa9.38□□□□□ -0.91
TPM3-216ENST00000473036 GNG5P63218 68 aa9.38□□□□□ -0.91
TPM3-216ENST00000473036 Q8TAT8 98 aa9.38□□□□□ -0.91
TPM3-216ENST00000473036 ZNF492Q9P255 531 aa9.38□□□□□ -0.91
TPM3-216ENST00000473036 RPH3ALQ9UNE2 315 aa9.38□□□□□ -0.91
TPM3-216ENST00000473036 PSG8Q9UQ74 426 aa9.38□□□□□ -0.91
TPM3-216ENST00000473036 GOLT1BQ9Y3E0 138 aa9.38□□□□□ -0.91
TPM3-216ENST00000473036 LY96Q9Y6Y9 160 aa9.38□□□□□ -0.91
TPM3-216ENST00000473036 DNAH17Q9UFH2 4485 aa9.38□□□□□ -0.91
TPM3-216ENST00000473036 ZNF727A8MUV8 499 aa9.37□□□□□ -0.91
TPM3-216ENST00000473036 KLLNB2CW77 178 aa9.37□□□□□ -0.91
TPM3-216ENST00000473036 KRBOX1C9JBD0 128 aa9.37□□□□□ -0.91
TPM3-216ENST00000473036 C9JCJ5 164 aa9.37□□□□□ -0.91
TPM3-216ENST00000473036 RPL35P42766 123 aaKnown RBP9.37□□□□□ -0.91
TPM3-216ENST00000473036 GNG4P50150 75 aa9.37□□□□□ -0.91
TPM3-216ENST00000473036 BTN1A1Q13410 526 aa9.37□□□□□ -0.91
TPM3-216ENST00000473036 BAGE2Q86Y30 109 aa9.37□□□□□ -0.91
TPM3-216ENST00000473036 ZFAND2AQ8N6M9 145 aa9.37□□□□□ -0.91
TPM3-216ENST00000473036 C11orf45Q8TAV5 145 aa9.37□□□□□ -0.91
TPM3-216ENST00000473036 LINC00476Q8WZB0 136 aa9.37□□□□□ -0.91
TPM3-216ENST00000473036 SMIM7Q9BQ49 75 aa9.37□□□□□ -0.91
TPM3-216ENST00000473036 NIPSNAP3BQ9BS92 247 aa9.37□□□□□ -0.91
TPM3-216ENST00000473036 FAT2Q9NYQ8 4349 aa9.37□□□□□ -0.91
TPM3-216ENST00000473036 TRAV8-1A0A0A6YYK1 113 aa9.36□□□□□ -0.91
TPM3-216ENST00000473036 TRAV12-3A0A0B4J271 114 aa9.36□□□□□ -0.91
TPM3-216ENST00000473036 TMEM218A2RU14 115 aa9.36□□□□□ -0.91
TPM3-216ENST00000473036 SMIM9A6NGZ8 99 aa9.36□□□□□ -0.91
TPM3-216ENST00000473036 ZNF324O75467 553 aaPredicted RBP9.36□□□□□ -0.91
TPM3-216ENST00000473036 CRISP2P16562 243 aa9.36□□□□□ -0.91
TPM3-216ENST00000473036 CEBPGP53567 150 aa9.36□□□□□ -0.91
TPM3-216ENST00000473036 EMP1P54849 157 aa9.36□□□□□ -0.91
TPM3-216ENST00000473036 TMEM241Q24JQ0 296 aa9.36□□□□□ -0.91
TPM3-216ENST00000473036 C12orf74Q32Q52 190 aa9.36□□□□□ -0.91
TPM3-216ENST00000473036 TVP23CQ96ET8 276 aa9.36□□□□□ -0.91
TPM3-216ENST00000473036 SEC11CQ9BY50 192 aa9.36□□□□□ -0.91
TPM3-216ENST00000473036 PARLQ9H300 379 aa9.36□□□□□ -0.91
TPM3-216ENST00000473036 HERC2O95714 4834 aa9.35□□□□□ -0.91
TPM3-216ENST00000473036 LTAP01374 205 aa9.35□□□□□ -0.91
TPM3-216ENST00000473036 SFTA3P0C7M3 94 aa9.35□□□□□ -0.91
TPM3-216ENST00000473036 PNRC1Q12796 327 aaPredicted RBP9.35□□□□□ -0.91
TPM3-216ENST00000473036 ZNF674Q2M3X9 581 aa9.35□□□□□ -0.91
TPM3-216ENST00000473036 SMUG1Q53HV7 270 aa9.35□□□□□ -0.91
TPM3-216ENST00000473036 Q6ZTC4 211 aa9.35□□□□□ -0.91
TPM3-216ENST00000473036 COX8CQ7Z4L0 72 aa9.35□□□□□ -0.91
TPM3-216ENST00000473036 PRNTQ86SH4 94 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms