RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 F6UB75 175 aa7.02□□□□□ -1.29
VPS52-216ENST00000471309 ZNF705DP0CH99 300 aaPredicted RBP7.02□□□□□ -1.29
VPS52-216ENST00000471309 ZNF705BP0CI00 300 aaPredicted RBP7.02□□□□□ -1.29
VPS52-216ENST00000471309 ZNF80P51504 273 aaPredicted RBP7.02□□□□□ -1.29
VPS52-216ENST00000471309 FOXA3P55318 350 aaPredicted RBP7.02□□□□□ -1.29
VPS52-216ENST00000471309 RPS20P60866 119 aaKnown RBP7.02□□□□□ -1.29
VPS52-216ENST00000471309 NSUN5P1Q3KNT7 163 aa7.02□□□□□ -1.29
VPS52-216ENST00000471309 LINC01559Q495D7 138 aa7.02□□□□□ -1.29
VPS52-216ENST00000471309 ACTL10Q5JWF8 245 aa7.02□□□□□ -1.29
VPS52-216ENST00000471309 Q6AWC8 147 aa7.02□□□□□ -1.29
VPS52-216ENST00000471309 RASL11AQ6T310 242 aa7.02□□□□□ -1.29
VPS52-216ENST00000471309 ATP5L2Q7Z4Y8 100 aa7.02□□□□□ -1.29
VPS52-216ENST00000471309 APRG1Q8IVJ8 170 aa7.02□□□□□ -1.29
VPS52-216ENST00000471309 NUP35Q8NFH5 326 aa7.02□□□□□ -1.29
VPS52-216ENST00000471309 GTSF1Q8WW33 167 aa7.02□□□□□ -1.29
VPS52-216ENST00000471309 ODF3Q96PU9 254 aa7.02□□□□□ -1.29
VPS52-216ENST00000471309 SAV1Q9H4B6 383 aaPredicted RBP7.02□□□□□ -1.29
VPS52-216ENST00000471309 XKRY2A2RUG3 117 aa7.01□□□□□ -1.29
VPS52-216ENST00000471309 TMEM189A5PLL7 270 aa7.01□□□□□ -1.29
VPS52-216ENST00000471309 FABP5P3A8MUU1 101 aa7.01□□□□□ -1.29
VPS52-216ENST00000471309 PHOX2AO14813 284 aa7.01□□□□□ -1.29
VPS52-216ENST00000471309 MT-ND6P03923 174 aa7.01□□□□□ -1.29
VPS52-216ENST00000471309 TRGC2P03986 189 aa7.01□□□□□ -1.29
VPS52-216ENST00000471309 CRISP2P16562 243 aa7.01□□□□□ -1.29
VPS52-216ENST00000471309 DEFB1P60022 68 aa7.01□□□□□ -1.29
VPS52-216ENST00000471309 CD300EQ496F6 205 aaPredicted RBP7.01□□□□□ -1.29
VPS52-216ENST00000471309 WDR73Q6P4I2 378 aa7.01□□□□□ -1.29
VPS52-216ENST00000471309 FOXI2Q6ZQN5 318 aa7.01□□□□□ -1.29
VPS52-216ENST00000471309 ZFAND2AQ8N6M9 145 aa7.01□□□□□ -1.29
VPS52-216ENST00000471309 OR2K2Q8NGT1 345 aa7.01□□□□□ -1.29
VPS52-216ENST00000471309 FBN3Q75N90 2809 aa7□□□□□ -1.29
VPS52-216ENST00000471309 A0A1B0GXF2 115 aa7□□□□□ -1.29
VPS52-216ENST00000471309 DUSP14O95147 198 aaKnown RBP7□□□□□ -1.29
VPS52-216ENST00000471309 PRR9Q5T870 116 aa7□□□□□ -1.29
VPS52-216ENST00000471309 GDF5OSQ5U4N7 250 aa7□□□□□ -1.29
VPS52-216ENST00000471309 MRPL54Q6P161 138 aaKnown RBP7□□□□□ -1.29
VPS52-216ENST00000471309 EBLN2Q6P2I7 272 aa7□□□□□ -1.29
VPS52-216ENST00000471309 ZFP82Q8N141 532 aa7□□□□□ -1.29
VPS52-216ENST00000471309 CITED1Q99966 193 aa7□□□□□ -1.29
VPS52-216ENST00000471309 GNB1LQ9BYB4 327 aa7□□□□□ -1.29
VPS52-216ENST00000471309 A8MTW9 85 aa6.99□□□□□ -1.29
VPS52-216ENST00000471309 KLLNB2CW77 178 aa6.99□□□□□ -1.29
VPS52-216ENST00000471309 SPINK4O60575 86 aa6.99□□□□□ -1.29
VPS52-216ENST00000471309 HIST1H2BKO60814 126 aa6.99□□□□□ -1.29
VPS52-216ENST00000471309 PF4P02776 101 aa6.99□□□□□ -1.29
VPS52-216ENST00000471309 HIST1H2BJP06899 126 aa6.99□□□□□ -1.29
VPS52-216ENST00000471309 GZMBP10144 247 aa6.99□□□□□ -1.29
VPS52-216ENST00000471309 HIST1H2BOP23527 126 aa6.99□□□□□ -1.29
VPS52-216ENST00000471309 HIST1H2BBP33778 126 aa6.99□□□□□ -1.29
VPS52-216ENST00000471309 CTRLP40313 264 aa6.99□□□□□ -1.29
VPS52-216ENST00000471309 LEPP41159 167 aa6.99□□□□□ -1.29
VPS52-216ENST00000471309 HIST1H2BDP58876 126 aa6.99□□□□□ -1.29
VPS52-216ENST00000471309 HIST1H2BCP62807 126 aa6.99□□□□□ -1.29
VPS52-216ENST00000471309 HIST2H2BEQ16778 126 aa6.99□□□□□ -1.29
VPS52-216ENST00000471309 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.99□□□□□ -1.29
VPS52-216ENST00000471309 LINC00482Q8N8I6 264 aa6.99□□□□□ -1.29
VPS52-216ENST00000471309 FRZBQ92765 325 aa6.99□□□□□ -1.29
VPS52-216ENST00000471309 HIST1H2BHQ93079 126 aa6.99□□□□□ -1.29
VPS52-216ENST00000471309 HIST1H2BNQ99877 126 aa6.99□□□□□ -1.29
VPS52-216ENST00000471309 HIST1H2BMQ99879 126 aa6.99□□□□□ -1.29
VPS52-216ENST00000471309 MAP6D1Q9H9H5 199 aa6.99□□□□□ -1.29
VPS52-216ENST00000471309 ZNF256Q9Y2P7 627 aaPredicted RBP6.99□□□□□ -1.29
VPS52-216ENST00000471309 TRAPPC1Q9Y5R8 145 aa6.99□□□□□ -1.29
VPS52-216ENST00000471309 TMSB15BA0A087X1C1 80 aa6.98□□□□□ -1.29
VPS52-216ENST00000471309 TRAV21A0A0B4J279 112 aa6.98□□□□□ -1.29
VPS52-216ENST00000471309 IGKV3D-20A0A0C4DH25 116 aa6.98□□□□□ -1.29
VPS52-216ENST00000471309 A0A1B0GW15 77 aa6.98□□□□□ -1.29
VPS52-216ENST00000471309 SNURFLB1AK76 121 aa6.98□□□□□ -1.29
VPS52-216ENST00000471309 SAP30O75446 220 aa6.98□□□□□ -1.29
VPS52-216ENST00000471309 IGLV1-51P01701 117 aa6.98□□□□□ -1.29
VPS52-216ENST00000471309 HLA-DQA1P01909 254 aa6.98□□□□□ -1.29
VPS52-216ENST00000471309 ORM1P02763 201 aa6.98□□□□□ -1.29
VPS52-216ENST00000471309 GPX1P07203 203 aa6.98□□□□□ -1.29
VPS52-216ENST00000471309 TRGC1P0CF51 173 aa6.98□□□□□ -1.29
VPS52-216ENST00000471309 IGLC6P0CF74 106 aa6.98□□□□□ -1.29
VPS52-216ENST00000471309 HLA-DRB4P13762 266 aa6.98□□□□□ -1.29
VPS52-216ENST00000471309 DEFB131AP59861 70 aa6.98□□□□□ -1.29
VPS52-216ENST00000471309 HBBP68871 147 aa6.98□□□□□ -1.29
VPS52-216ENST00000471309 FABP9Q0Z7S8 132 aa6.98□□□□□ -1.29
VPS52-216ENST00000471309 TMEM136Q6ZRR5 245 aa6.98□□□□□ -1.29
VPS52-216ENST00000471309 BORCS7Q96B45 105 aa6.98□□□□□ -1.29
VPS52-216ENST00000471309 PGLYRP4Q96LB8 373 aa6.98□□□□□ -1.29
VPS52-216ENST00000471309 HLA-DRB4X5D2U9 266 aa6.98□□□□□ -1.29
VPS52-216ENST00000471309 A0A1B0GUT8 65 aa6.97□□□□□ -1.29
VPS52-216ENST00000471309 LOC105371267A0A1B0GV96 52 aa6.97□□□□□ -1.29
VPS52-216ENST00000471309 S100A8P05109 93 aa6.97□□□□□ -1.29
VPS52-216ENST00000471309 FRMD6-AS1P0C7T7 363 aa6.97□□□□□ -1.29
VPS52-216ENST00000471309 CD33P20138 364 aa6.97□□□□□ -1.29
VPS52-216ENST00000471309 TSPOP30536 169 aa6.97□□□□□ -1.29
VPS52-216ENST00000471309 ODF3L2Q3SX64 289 aa6.97□□□□□ -1.29
VPS52-216ENST00000471309 AMTNQ6UX39 209 aa6.97□□□□□ -1.29
VPS52-216ENST00000471309 ZNF575Q86XF7 245 aa6.97□□□□□ -1.29
VPS52-216ENST00000471309 FER1L6-AS1Q8NA97 138 aa6.97□□□□□ -1.29
VPS52-216ENST00000471309 GATD1Q8NB37 220 aa6.97□□□□□ -1.29
VPS52-216ENST00000471309 MRPL18Q9H0U6 180 aaKnown RBP6.97□□□□□ -1.29
VPS52-216ENST00000471309 C11orf21Q9P2W6 132 aa6.97□□□□□ -1.29
VPS52-216ENST00000471309 C7orf71A4D174 169 aa6.96□□□□□ -1.3
VPS52-216ENST00000471309 S100A6P06703 90 aa6.96□□□□□ -1.3
VPS52-216ENST00000471309 RNASE4P34096 147 aaKnown RBP6.96□□□□□ -1.3
VPS52-216ENST00000471309 CDKN1BP46527 198 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms