RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 M0R2N4 97 aa11.02□□□□□ -0.65
HDAC6-218ENST00000470942 ARPC5O15511 151 aa11.02□□□□□ -0.65
HDAC6-218ENST00000470942 GCHFRP30047 84 aa11.02□□□□□ -0.65
HDAC6-218ENST00000470942 RNF212Q495C1 297 aa11.02□□□□□ -0.65
HDAC6-218ENST00000470942 C11orf72Q8NBR9 251 aa11.02□□□□□ -0.65
HDAC6-218ENST00000470942 ATG101Q9BSB4 218 aa11.02□□□□□ -0.65
HDAC6-218ENST00000470942 TP53TG3Q9ULZ0 132 aa11.02□□□□□ -0.65
HDAC6-218ENST00000470942 LENEPQ9Y5L5 61 aa11.02□□□□□ -0.65
HDAC6-218ENST00000470942 NACAE9PAV3 2078 aa11.01□□□□□ -0.65
HDAC6-218ENST00000470942 FRAS1Q86XX4 4008 aa11.01□□□□□ -0.65
HDAC6-218ENST00000470942 TRGV2A0A075B6R0 118 aa11.01□□□□□ -0.65
HDAC6-218ENST00000470942 TRGV1A0A0A0MS02 117 aa11.01□□□□□ -0.65
HDAC6-218ENST00000470942 SMLR1H3BR10 107 aa11.01□□□□□ -0.65
HDAC6-218ENST00000470942 CXorf1O96002 111 aa11.01□□□□□ -0.65
HDAC6-218ENST00000470942 GNG5P63218 68 aa11.01□□□□□ -0.65
HDAC6-218ENST00000470942 MUC21Q5SSG8 566 aa11.01□□□□□ -0.65
HDAC6-218ENST00000470942 IQCF2Q8IXL9 164 aa11.01□□□□□ -0.65
HDAC6-218ENST00000470942 ARL6IP6Q8N6S5 226 aa11.01□□□□□ -0.65
HDAC6-218ENST00000470942 TMED6Q8WW62 240 aa11.01□□□□□ -0.65
HDAC6-218ENST00000470942 KLF12Q9Y4X4 402 aa11.01□□□□□ -0.65
HDAC6-218ENST00000470942 BIRC6Q9NR09 4857 aa11.01□□□□□ -0.65
HDAC6-218ENST00000470942 IGLV2-18A0A075B6J9 118 aa11□□□□□ -0.65
HDAC6-218ENST00000470942 TAAR5O14804 337 aa11□□□□□ -0.65
HDAC6-218ENST00000470942 TCL1AP56279 114 aa11□□□□□ -0.65
HDAC6-218ENST00000470942 SSX7Q7RTT5 188 aa11□□□□□ -0.65
HDAC6-218ENST00000470942 ST6GAL2Q96JF0 529 aa11□□□□□ -0.65
HDAC6-218ENST00000470942 TMPRSS5Q9H3S3 457 aa11□□□□□ -0.65
HDAC6-218ENST00000470942 TMEM167BQ9NRX6 74 aa11□□□□□ -0.65
HDAC6-218ENST00000470942 TRAV26-1A0A087WT03 109 aa10.99□□□□□ -0.65
HDAC6-218ENST00000470942 TRAV8-1A0A0A6YYK1 113 aa10.99□□□□□ -0.65
HDAC6-218ENST00000470942 A0A0J9YY99 117 aa10.99□□□□□ -0.65
HDAC6-218ENST00000470942 HOXA5P20719 270 aa10.99□□□□□ -0.65
HDAC6-218ENST00000470942 IBA57Q5T440 356 aaKnown RBP10.99□□□□□ -0.65
HDAC6-218ENST00000470942 Q6AWC8 147 aa10.99□□□□□ -0.65
HDAC6-218ENST00000470942 SUN5Q8TC36 379 aa10.99□□□□□ -0.65
HDAC6-218ENST00000470942 SPINK4O60575 86 aa10.98□□□□□ -0.65
HDAC6-218ENST00000470942 SUMO1P63165 101 aaKnown RBP10.98□□□□□ -0.65
HDAC6-218ENST00000470942 ZNF415Q09FC8 603 aa10.98□□□□□ -0.65
HDAC6-218ENST00000470942 AKR1C8PQ5T2L2 129 aa10.98□□□□□ -0.65
HDAC6-218ENST00000470942 FAM159AQ6UWV7 190 aa10.98□□□□□ -0.65
HDAC6-218ENST00000470942 C5orf17Q8NAS9 161 aa10.98□□□□□ -0.65
HDAC6-218ENST00000470942 SGK494Q96LW2 274 aa10.98□□□□□ -0.65
HDAC6-218ENST00000470942 TREM1Q9NP99 234 aa10.98□□□□□ -0.65
HDAC6-218ENST00000470942 NAGKQ9UJ70 344 aa10.98□□□□□ -0.65
HDAC6-218ENST00000470942 CTXND1A0A1B0GTU2 59 aa10.97□□□□□ -0.65
HDAC6-218ENST00000470942 F6UZH7 168 aa10.97□□□□□ -0.65
HDAC6-218ENST00000470942 K7EQM0 130 aa10.97□□□□□ -0.65
HDAC6-218ENST00000470942 TCRAP04437 139 aa10.97□□□□□ -0.65
HDAC6-218ENST00000470942 CCL18P55774 89 aa10.97□□□□□ -0.65
HDAC6-218ENST00000470942 TMEM183BQ1AE95 376 aa10.97□□□□□ -0.65
HDAC6-218ENST00000470942 TMEM183AQ8IXX5 376 aa10.97□□□□□ -0.65
HDAC6-218ENST00000470942 CYTL1Q9NRR1 136 aa10.97□□□□□ -0.65
HDAC6-218ENST00000470942 MRPL16Q9NX20 251 aaKnown RBP10.97□□□□□ -0.65
HDAC6-218ENST00000470942 SERTM2A0A1B0GWG4 89 aa10.96□□□□□ -0.65
HDAC6-218ENST00000470942 ZNF726P1Q15940 193 aa10.96□□□□□ -0.65
HDAC6-218ENST00000470942 LGALS9BQ3B8N2 356 aa10.96□□□□□ -0.65
HDAC6-218ENST00000470942 TVP23CQ96ET8 276 aa10.96□□□□□ -0.65
HDAC6-218ENST00000470942 NDFIP1Q9BT67 221 aa10.96□□□□□ -0.65
HDAC6-218ENST00000470942 MUC4Q99102 2169 aa10.95□□□□□ -0.66
HDAC6-218ENST00000470942 TRGV11A0A075B6L2 103 aa10.95□□□□□ -0.66
HDAC6-218ENST00000470942 TRAV21A0A0B4J279 112 aa10.95□□□□□ -0.66
HDAC6-218ENST00000470942 GGTLC3B5MD39 225 aa10.95□□□□□ -0.66
HDAC6-218ENST00000470942 IGHV3-53P01767 116 aa10.95□□□□□ -0.66
HDAC6-218ENST00000470942 FGF8P55075 233 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-218ENST00000470942 FAM3BP58499 235 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-218ENST00000470942 C18orf15Q96N68 181 aa10.95□□□□□ -0.66
HDAC6-218ENST00000470942 MDFICQ9P1T7 246 aa10.95□□□□□ -0.66
HDAC6-218ENST00000470942 EPDR1Q9UM22 224 aa10.95□□□□□ -0.66
HDAC6-218ENST00000470942 PSG8Q9UQ74 426 aa10.95□□□□□ -0.66
HDAC6-218ENST00000470942 A0A1W2PRE2 83 aa10.94□□□□□ -0.66
HDAC6-218ENST00000470942 UBE2G2P60604 165 aa10.94□□□□□ -0.66
HDAC6-218ENST00000470942 KCNRGQ8N5I3 272 aa10.94□□□□□ -0.66
HDAC6-218ENST00000470942 LINC00588Q9Y4M8 146 aa10.94□□□□□ -0.66
HDAC6-218ENST00000470942 GNRH2O43555 120 aa10.93□□□□□ -0.66
HDAC6-218ENST00000470942 IFNA7P01567 189 aa10.93□□□□□ -0.66
HDAC6-218ENST00000470942 FLI1Q01543 452 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-218ENST00000470942 ZNF345Q14585 488 aa10.93□□□□□ -0.66
HDAC6-218ENST00000470942 LINC00336Q6ZUF6 198 aa10.93□□□□□ -0.66
HDAC6-218ENST00000470942 PRNTQ86SH4 94 aa10.93□□□□□ -0.66
HDAC6-218ENST00000470942 CYB561D1Q8N8Q1 229 aa10.93□□□□□ -0.66
HDAC6-218ENST00000470942 OR11H4Q8NGC9 324 aa10.93□□□□□ -0.66
HDAC6-218ENST00000470942 C8orf49Q96NF6 230 aa10.93□□□□□ -0.66
HDAC6-218ENST00000470942 SPXQ9BT56 116 aa10.93□□□□□ -0.66
HDAC6-218ENST00000470942 DNAH17Q9UFH2 4485 aa10.93□□□□□ -0.66
HDAC6-218ENST00000470942 DNAH2Q9P225 4427 aa10.92□□□□□ -0.66
HDAC6-218ENST00000470942 MAP1LC3B2A6NCE7 125 aa10.92□□□□□ -0.66
HDAC6-218ENST00000470942 HMSDA8MTL9 139 aa10.92□□□□□ -0.66
HDAC6-218ENST00000470942 H3BNG1 76 aa10.92□□□□□ -0.66
HDAC6-218ENST00000470942 TDRG1Q3Y452 100 aa10.92□□□□□ -0.66
HDAC6-218ENST00000470942 Q6ZR54 194 aa10.92□□□□□ -0.66
HDAC6-218ENST00000470942 MAP1LC3BQ9GZQ8 125 aa10.92□□□□□ -0.66
HDAC6-218ENST00000470942 SDF2L1Q9HCN8 221 aa10.92□□□□□ -0.66
HDAC6-218ENST00000470942 A0A0D9SG52 128 aa10.91□□□□□ -0.66
HDAC6-218ENST00000470942 KANTRA0A1W2PQU2 76 aa10.91□□□□□ -0.66
HDAC6-218ENST00000470942 GCGP01275 180 aa10.91□□□□□ -0.66
HDAC6-218ENST00000470942 ZFP69Q49AA0 526 aa10.91□□□□□ -0.66
HDAC6-218ENST00000470942 TMEM75Q8N9X5 138 aa10.91□□□□□ -0.66
HDAC6-218ENST00000470942 ZNRF2Q8NHG8 242 aa10.91□□□□□ -0.66
HDAC6-218ENST00000470942 VSIG2Q96IQ7 327 aa10.91□□□□□ -0.66
HDAC6-218ENST00000470942 KCNS1Q96KK3 526 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms