RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 IGLV2-11P01706 119 aa8.59□□□□□ -1.03
VPS13D-204ENST00000469054 HTN1P15515 57 aa8.59□□□□□ -1.03
VPS13D-204ENST00000469054 ATP5G3P48201 142 aa8.59□□□□□ -1.03
VPS13D-204ENST00000469054 FLI1Q01543 452 aaPredicted RBP8.59□□□□□ -1.03
VPS13D-204ENST00000469054 BTN1A1Q13410 526 aa8.59□□□□□ -1.03
VPS13D-204ENST00000469054 PRR9Q5T870 116 aa8.59□□□□□ -1.03
VPS13D-204ENST00000469054 TMEM75Q8N9X5 138 aa8.59□□□□□ -1.03
VPS13D-204ENST00000469054 TVP23CQ96ET8 276 aa8.59□□□□□ -1.03
VPS13D-204ENST00000469054 LINC00479Q96M42 142 aa8.59□□□□□ -1.03
VPS13D-204ENST00000469054 PYGO2Q9BRQ0 406 aa8.59□□□□□ -1.03
VPS13D-204ENST00000469054 TCEAL7Q9BRU2 100 aa8.59□□□□□ -1.03
VPS13D-204ENST00000469054 STAB2Q8WWQ8 2551 aa8.58□□□□□ -1.04
VPS13D-204ENST00000469054 TRAV34A0A0B4J273 112 aa8.58□□□□□ -1.04
VPS13D-204ENST00000469054 C3orf84H3BNL1 204 aa8.58□□□□□ -1.04
VPS13D-204ENST00000469054 AZU1P20160 251 aa8.58□□□□□ -1.04
VPS13D-204ENST00000469054 EMP1P54849 157 aa8.58□□□□□ -1.04
VPS13D-204ENST00000469054 BLOC1S1P78537 153 aa8.58□□□□□ -1.04
VPS13D-204ENST00000469054 C11orf45Q8TAV5 145 aa8.58□□□□□ -1.04
VPS13D-204ENST00000469054 NDFIP1Q9BT67 221 aa8.58□□□□□ -1.04
VPS13D-204ENST00000469054 TREM1Q9NP99 234 aa8.58□□□□□ -1.04
VPS13D-204ENST00000469054 MANBALQ9NQG1 85 aa8.58□□□□□ -1.04
VPS13D-204ENST00000469054 GNG13Q9P2W3 67 aa8.58□□□□□ -1.04
VPS13D-204ENST00000469054 CXorf65A6NEN9 183 aa8.57□□□□□ -1.04
VPS13D-204ENST00000469054 C11orf94C9JXX5 98 aa8.57□□□□□ -1.04
VPS13D-204ENST00000469054 PMS2P11Q13670 270 aa8.57□□□□□ -1.04
VPS13D-204ENST00000469054 SAPCD1Q5SSQ6 148 aa8.57□□□□□ -1.04
VPS13D-204ENST00000469054 Q6AWC8 147 aa8.57□□□□□ -1.04
VPS13D-204ENST00000469054 ZNF493Q6ZR52 646 aa8.57□□□□□ -1.04
VPS13D-204ENST00000469054 PRNTQ86SH4 94 aa8.57□□□□□ -1.04
VPS13D-204ENST00000469054 SPART-AS1P0CW21 52 aa8.56□□□□□ -1.04
VPS13D-204ENST00000469054 NANOS2P60321 138 aaKnown RBP8.56□□□□□ -1.04
VPS13D-204ENST00000469054 Q6ZQT7 251 aa8.56□□□□□ -1.04
VPS13D-204ENST00000469054 RNASE8Q8TDE3 154 aaKnown RBP8.56□□□□□ -1.04
VPS13D-204ENST00000469054 TMEM263Q8WUH6 116 aaKnown RBP8.56□□□□□ -1.04
VPS13D-204ENST00000469054 C16orf74Q96GX8 76 aa8.56□□□□□ -1.04
VPS13D-204ENST00000469054 TXNDC17Q9BRA2 123 aa8.56□□□□□ -1.04
VPS13D-204ENST00000469054 LINC00467Q9BRT7 94 aa8.56□□□□□ -1.04
VPS13D-204ENST00000469054 DKK2Q9UBU2 259 aa8.56□□□□□ -1.04
VPS13D-204ENST00000469054 CELA1Q9UNI1 258 aa8.56□□□□□ -1.04
VPS13D-204ENST00000469054 KLF12Q9Y4X4 402 aa8.56□□□□□ -1.04
VPS13D-204ENST00000469054 IGHV1OR15-1A0A075B7D0 117 aa8.55□□□□□ -1.04
VPS13D-204ENST00000469054 TRAV21A0A0B4J279 112 aa8.55□□□□□ -1.04
VPS13D-204ENST00000469054 SCO2A0A1W2PP80 73 aa8.55□□□□□ -1.04
VPS13D-204ENST00000469054 PLAC8L1A1L4L8 177 aa8.55□□□□□ -1.04
VPS13D-204ENST00000469054 RGS13O14921 159 aa8.55□□□□□ -1.04
VPS13D-204ENST00000469054 IFNA1P01562 189 aa8.55□□□□□ -1.04
VPS13D-204ENST00000469054 AKR1C3P42330 323 aa8.55□□□□□ -1.04
VPS13D-204ENST00000469054 TMEM183BQ1AE95 376 aa8.55□□□□□ -1.04
VPS13D-204ENST00000469054 ANXA2RQ3ZCQ2 193 aa8.55□□□□□ -1.04
VPS13D-204ENST00000469054 CASC10Q5T4H9 136 aa8.55□□□□□ -1.04
VPS13D-204ENST00000469054 FAM222AQ5U5X8 452 aa8.55□□□□□ -1.04
VPS13D-204ENST00000469054 ZFAND6Q6FIF0 208 aa8.55□□□□□ -1.04
VPS13D-204ENST00000469054 EIF4E3Q8N5X7 224 aaKnown RBP8.55□□□□□ -1.04
VPS13D-204ENST00000469054 LYPD6BQ8NI32 183 aa8.55□□□□□ -1.04
VPS13D-204ENST00000469054 FMC1Q96HJ9 113 aa8.55□□□□□ -1.04
VPS13D-204ENST00000469054 C8orf49Q96NF6 230 aa8.55□□□□□ -1.04
VPS13D-204ENST00000469054 TRBV6-1A0A0K0K1D8 114 aa8.54□□□□□ -1.04
VPS13D-204ENST00000469054 TEX48A0A1B0GUV7 120 aa8.54□□□□□ -1.04
VPS13D-204ENST00000469054 CBY3A6NI87 242 aa8.54□□□□□ -1.04
VPS13D-204ENST00000469054 BCL2P10415 239 aa8.54□□□□□ -1.04
VPS13D-204ENST00000469054 TAGLN2P37802 199 aaKnown RBP8.54□□□□□ -1.04
VPS13D-204ENST00000469054 UBE2G1P62253 170 aa8.54□□□□□ -1.04
VPS13D-204ENST00000469054 C12orf74Q32Q52 190 aa8.54□□□□□ -1.04
VPS13D-204ENST00000469054 SMUG1Q53HV7 270 aa8.54□□□□□ -1.04
VPS13D-204ENST00000469054 TEX261Q6UWH6 196 aa8.54□□□□□ -1.04
VPS13D-204ENST00000469054 Q86TA4 180 aa8.54□□□□□ -1.04
VPS13D-204ENST00000469054 C2CD4CQ8TF44 421 aa8.54□□□□□ -1.04
VPS13D-204ENST00000469054 ZFP30Q9Y2G7 519 aa8.54□□□□□ -1.04
VPS13D-204ENST00000469054 TIMM8BQ9Y5J9 83 aaPredicted RBP8.54□□□□□ -1.04
VPS13D-204ENST00000469054 DNAH7Q8WXX0 4024 aa8.54□□□□□ -1.04
VPS13D-204ENST00000469054 LYRM9A8MSI8 78 aa8.53□□□□□ -1.04
VPS13D-204ENST00000469054 GCGP01275 180 aa8.53□□□□□ -1.04
VPS13D-204ENST00000469054 S100A9P06702 114 aaKnown RBP8.53□□□□□ -1.04
VPS13D-204ENST00000469054 ZNF80P51504 273 aaPredicted RBP8.53□□□□□ -1.04
VPS13D-204ENST00000469054 MEF2BQ02080 365 aaPredicted RBP8.53□□□□□ -1.04
VPS13D-204ENST00000469054 MUC21Q5SSG8 566 aa8.53□□□□□ -1.04
VPS13D-204ENST00000469054 FAM159AQ6UWV7 190 aa8.53□□□□□ -1.04
VPS13D-204ENST00000469054 ZNF767PQ75MW2 155 aa8.53□□□□□ -1.04
VPS13D-204ENST00000469054 ZNF680Q8NEM1 530 aa8.53□□□□□ -1.04
VPS13D-204ENST00000469054 VAX2Q9UIW0 290 aa8.53□□□□□ -1.04
VPS13D-204ENST00000469054 TP53TG3Q9ULZ0 132 aa8.53□□□□□ -1.04
VPS13D-204ENST00000469054 SNURFLB1AK76 121 aa8.52□□□□□ -1.05
VPS13D-204ENST00000469054 LTAP01374 205 aa8.52□□□□□ -1.05
VPS13D-204ENST00000469054 PFN1P07737 140 aaKnown RBP8.52□□□□□ -1.05
VPS13D-204ENST00000469054 TDRG1Q3Y452 100 aa8.52□□□□□ -1.05
VPS13D-204ENST00000469054 Q6ZTC4 211 aa8.52□□□□□ -1.05
VPS13D-204ENST00000469054 COX8CQ7Z4L0 72 aa8.52□□□□□ -1.05
VPS13D-204ENST00000469054 C11orf72Q8NBR9 251 aa8.52□□□□□ -1.05
VPS13D-204ENST00000469054 PHLDA1Q8WV24 401 aaPredicted RBP8.52□□□□□ -1.05
VPS13D-204ENST00000469054 C11orf52Q96A22 123 aa8.52□□□□□ -1.05
VPS13D-204ENST00000469054 NOP10Q9NPE3 64 aaKnown RBP8.52□□□□□ -1.05
VPS13D-204ENST00000469054 GSN-AS1Q9NRJ2 163 aa8.52□□□□□ -1.05
VPS13D-204ENST00000469054 NAGKQ9UJ70 344 aa8.52□□□□□ -1.05
VPS13D-204ENST00000469054 NUPR2A6NF83 97 aa8.51□□□□□ -1.05
VPS13D-204ENST00000469054 PDE6DO43924 150 aa8.51□□□□□ -1.05
VPS13D-204ENST00000469054 DAD1P61803 113 aa8.51□□□□□ -1.05
VPS13D-204ENST00000469054 IBA57Q5T440 356 aaKnown RBP8.51□□□□□ -1.05
VPS13D-204ENST00000469054 CEMP1Q6PRD7 247 aaPredicted RBP8.51□□□□□ -1.05
VPS13D-204ENST00000469054 TMEM183AQ8IXX5 376 aa8.51□□□□□ -1.05
VPS13D-204ENST00000469054 RBFOX3A6NFN3 312 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 198.2 ms