RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 AGPAT2O15120 278 aa6.51□□□□□ -1.37
HDAC3-203ENST00000467533 SEC11BP0C7V7 166 aa6.51□□□□□ -1.37
HDAC3-203ENST00000467533 UBE2MP61081 183 aaKnown RBP6.51□□□□□ -1.37
HDAC3-203ENST00000467533 LSM3P62310 102 aaKnown RBP6.51□□□□□ -1.37
HDAC3-203ENST00000467533 RAB31Q13636 194 aa6.51□□□□□ -1.37
HDAC3-203ENST00000467533 NEDD8Q15843 81 aa6.51□□□□□ -1.37
HDAC3-203ENST00000467533 C4orf46Q504U0 113 aa6.51□□□□□ -1.37
HDAC3-203ENST00000467533 C10orf113Q5VZT2 155 aa6.51□□□□□ -1.37
HDAC3-203ENST00000467533 UBE2WQ96B02 151 aa6.51□□□□□ -1.37
HDAC3-203ENST00000467533 SH3BGRL3Q9H299 93 aa6.51□□□□□ -1.37
HDAC3-203ENST00000467533 KLK12Q9UKR0 248 aa6.51□□□□□ -1.37
HDAC3-203ENST00000467533 PRELID1Q9Y255 219 aa6.51□□□□□ -1.37
HDAC3-203ENST00000467533 KIF25-AS1Q9Y6Z4 181 aa6.51□□□□□ -1.37
HDAC3-203ENST00000467533 K7EPK0 472 aa6.5□□□□□ -1.37
HDAC3-203ENST00000467533 PHOX2AO14813 284 aa6.5□□□□□ -1.37
HDAC3-203ENST00000467533 ZNF253O75346 499 aa6.5□□□□□ -1.37
HDAC3-203ENST00000467533 HIST1H1EP10412 219 aaKnown RBP6.5□□□□□ -1.37
HDAC3-203ENST00000467533 POLR2GP62487 172 aaKnown RBP eCLIP6.5□□□□□ -1.37
HDAC3-203ENST00000467533 FAM159AQ6UWV7 190 aa6.5□□□□□ -1.37
HDAC3-203ENST00000467533 C9orf163Q8N9P6 203 aa6.5□□□□□ -1.37
HDAC3-203ENST00000467533 Q8TAT8 98 aa6.5□□□□□ -1.37
HDAC3-203ENST00000467533 RAB2BQ8WUD1 216 aa6.5□□□□□ -1.37
HDAC3-203ENST00000467533 MGAT4CQ9UBM8 478 aa6.5□□□□□ -1.37
HDAC3-203ENST00000467533 NAGKQ9UJ70 344 aa6.5□□□□□ -1.37
HDAC3-203ENST00000467533 MUC2Q02817 5179 aa6.5□□□□□ -1.37
HDAC3-203ENST00000467533 IGHV3-73A0A0B4J1V6 119 aa6.49□□□□□ -1.37
HDAC3-203ENST00000467533 PIGBOS1A0A0B4J2F0 54 aa6.49□□□□□ -1.37
HDAC3-203ENST00000467533 TRBV6-4A0A1B0GX49 114 aa6.49□□□□□ -1.37
HDAC3-203ENST00000467533 DUXBA0A1W2PPF3 345 aa6.49□□□□□ -1.37
HDAC3-203ENST00000467533 REG3GQ6UW15 175 aa6.49□□□□□ -1.37
HDAC3-203ENST00000467533 C7orf33Q8WU49 177 aa6.49□□□□□ -1.37
HDAC3-203ENST00000467533 DPH3Q96FX2 82 aa6.49□□□□□ -1.37
HDAC3-203ENST00000467533 NPVFQ9HCQ7 196 aa6.49□□□□□ -1.37
HDAC3-203ENST00000467533 BATF3Q9NR55 127 aa6.49□□□□□ -1.37
HDAC3-203ENST00000467533 CCDC59Q9P031 241 aaKnown RBP6.49□□□□□ -1.37
HDAC3-203ENST00000467533 ZNF492Q9P255 531 aa6.49□□□□□ -1.37
HDAC3-203ENST00000467533 TRBV19A0A075B6N1 114 aa6.48□□□□□ -1.37
HDAC3-203ENST00000467533 USP17L23D6RBM5 183 aa6.48□□□□□ -1.37
HDAC3-203ENST00000467533 HLA-DQA1P01909 254 aa6.48□□□□□ -1.37
HDAC3-203ENST00000467533 SLC25A6P12236 298 aa6.48□□□□□ -1.37
HDAC3-203ENST00000467533 ZNF138P52744 262 aa6.48□□□□□ -1.37
HDAC3-203ENST00000467533 NIT1Q86X76 327 aa6.48□□□□□ -1.37
HDAC3-203ENST00000467533 EXOC3-AS1Q8N2X6 119 aa6.48□□□□□ -1.37
HDAC3-203ENST00000467533 PRRT1Q99946 306 aa6.48□□□□□ -1.37
HDAC3-203ENST00000467533 SOSTQ9BQB4 213 aa6.48□□□□□ -1.37
HDAC3-203ENST00000467533 C1orf43Q9BWL3 253 aa6.48□□□□□ -1.37
HDAC3-203ENST00000467533 AAMDCQ9H7C9 122 aa6.48□□□□□ -1.37
HDAC3-203ENST00000467533 NDUFA13Q9P0J0 144 aa6.48□□□□□ -1.37
HDAC3-203ENST00000467533 EXTL2Q9UBQ6 330 aa6.48□□□□□ -1.37
HDAC3-203ENST00000467533 TIMM9Q9Y5J7 89 aa6.48□□□□□ -1.37
HDAC3-203ENST00000467533 AKAIN1P0CW23 69 aa6.47□□□□□ -1.37
HDAC3-203ENST00000467533 DGAT2L7PQ6IED9 249 aa6.47□□□□□ -1.37
HDAC3-203ENST00000467533 DPPA3Q6W0C5 159 aa6.47□□□□□ -1.37
HDAC3-203ENST00000467533 FUNDC2Q9BWH2 189 aa6.47□□□□□ -1.37
HDAC3-203ENST00000467533 PSENENQ9NZ42 101 aa6.47□□□□□ -1.37
HDAC3-203ENST00000467533 A0A087WWC5 75 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 A0A087WX48 190 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 A0A087WYN8 130 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 GAGE12JA6NER3 117 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 A6NHS1 94 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 FNDC10F2Z333 226 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 NDUFB4O95168 129 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 PRSS1P07477 247 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 METTL15P1P0C7V9 234 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 TMBIM6P55061 237 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 PRR3P79522 188 aaKnown RBP6.46□□□□□ -1.38
HDAC3-203ENST00000467533 RPL19P84098 196 aaKnown RBP6.46□□□□□ -1.38
HDAC3-203ENST00000467533 GAGE1Q13065 139 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 GAGE4Q13068 117 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 GAGE5Q13069 117 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 CIRBPQ14011 172 aaKnown RBP6.46□□□□□ -1.38
HDAC3-203ENST00000467533 ZNF266Q14584 549 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 ELOBQ15370 118 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 GAGE13Q4V321 117 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 ATRAIDQ6UW56 229 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 SDIM1Q6ZPB5 146 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 CLVS1Q8IUQ0 354 aaPredicted RBP6.46□□□□□ -1.38
HDAC3-203ENST00000467533 OR10G9Q8NGN4 311 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 RNF185Q96GF1 192 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 SCGB3A2Q96PL1 93 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 ATP5SQ99766 215 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 BCL7BQ9BQE9 202 aa6.46□□□□□ -1.38
HDAC3-203ENST00000467533 TRBV7-9A0A0J9YWB2 115 aa6.45□□□□□ -1.38
HDAC3-203ENST00000467533 CIDEAO60543 219 aa6.45□□□□□ -1.38
HDAC3-203ENST00000467533 CHTF8P0CG12 524 aa6.45□□□□□ -1.38
HDAC3-203ENST00000467533 MGST1P10620 155 aaKnown RBP6.45□□□□□ -1.38
HDAC3-203ENST00000467533 SSBP1Q04837 148 aaKnown RBP6.45□□□□□ -1.38
HDAC3-203ENST00000467533 Q0VG73 95 aa6.45□□□□□ -1.38
HDAC3-203ENST00000467533 PDE6HQ13956 83 aa6.45□□□□□ -1.38
HDAC3-203ENST00000467533 CFAP126Q5VTH2 177 aa6.45□□□□□ -1.38
HDAC3-203ENST00000467533 Q6AWC8 147 aa6.45□□□□□ -1.38
HDAC3-203ENST00000467533 KCNIP4Q6PIL6 250 aa6.45□□□□□ -1.38
HDAC3-203ENST00000467533 CYB561D1Q8N8Q1 229 aa6.45□□□□□ -1.38
HDAC3-203ENST00000467533 OR1L4Q8NGR5 311 aa6.45□□□□□ -1.38
HDAC3-203ENST00000467533 C15orf40Q8WUR7 153 aa6.45□□□□□ -1.38
HDAC3-203ENST00000467533 MGST2Q99735 147 aa6.45□□□□□ -1.38
HDAC3-203ENST00000467533 SLC39A9Q9NUM3 307 aa6.45□□□□□ -1.38
HDAC3-203ENST00000467533 RABL2BQ9UNT1 228 aa6.45□□□□□ -1.38
HDAC3-203ENST00000467533 PGPA6NDG6 321 aa6.44□□□□□ -1.38
HDAC3-203ENST00000467533 GNRH2O43555 120 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms