RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 TRAV12-3A0A0B4J271 114 aa13.73□□□□□ -0.21
USP11-205ENST00000467378 C7orf71A4D174 169 aa13.73□□□□□ -0.21
USP11-205ENST00000467378 IFNA7P01567 189 aa13.73□□□□□ -0.21
USP11-205ENST00000467378 IGLV2-11P01706 119 aa13.73□□□□□ -0.21
USP11-205ENST00000467378 GPX1P07203 203 aa13.73□□□□□ -0.21
USP11-205ENST00000467378 PRR9Q5T870 116 aa13.73□□□□□ -0.21
USP11-205ENST00000467378 CYB561D1Q8N8Q1 229 aa13.73□□□□□ -0.21
USP11-205ENST00000467378 TVP23CQ96ET8 276 aa13.73□□□□□ -0.21
USP11-205ENST00000467378 SGK494Q96LW2 274 aa13.73□□□□□ -0.21
USP11-205ENST00000467378 LINC01587Q99440 93 aa13.73□□□□□ -0.21
USP11-205ENST00000467378 K7EQM0 130 aa13.72□□□□□ -0.21
USP11-205ENST00000467378 PEX7O00628 323 aa13.72□□□□□ -0.21
USP11-205ENST00000467378 ZNF324O75467 553 aaPredicted RBP13.72□□□□□ -0.21
USP11-205ENST00000467378 PRM2P04554 102 aa13.72□□□□□ -0.21
USP11-205ENST00000467378 BTN1A1Q13410 526 aa13.72□□□□□ -0.21
USP11-205ENST00000467378 CEMP1Q6PRD7 247 aaPredicted RBP13.72□□□□□ -0.21
USP11-205ENST00000467378 TMEM75Q8N9X5 138 aa13.72□□□□□ -0.21
USP11-205ENST00000467378 HIST1H2BAQ96A08 127 aa13.72□□□□□ -0.21
USP11-205ENST00000467378 LINC00479Q96M42 142 aa13.72□□□□□ -0.21
USP11-205ENST00000467378 PSG8Q9UQ74 426 aa13.72□□□□□ -0.21
USP11-205ENST00000467378 MUC4Q99102 2169 aa13.72□□□□□ -0.21
USP11-205ENST00000467378 ZNF705GA8MUZ8 300 aaPredicted RBP13.71□□□□□ -0.21
USP11-205ENST00000467378 RNASE4P34096 147 aaKnown RBP13.71□□□□□ -0.21
USP11-205ENST00000467378 BLOC1S1P78537 153 aa13.71□□□□□ -0.21
USP11-205ENST00000467378 RRN3P1Q2M238 152 aa13.71□□□□□ -0.21
USP11-205ENST00000467378 TCEAL7Q9BRU2 100 aa13.71□□□□□ -0.21
USP11-205ENST00000467378 MANBALQ9NQG1 85 aa13.71□□□□□ -0.21
USP11-205ENST00000467378 GNG13Q9P2W3 67 aa13.71□□□□□ -0.21
USP11-205ENST00000467378 KLK5Q9Y337 293 aaPredicted RBP13.71□□□□□ -0.21
USP11-205ENST00000467378 FBLL1A6NHQ2 334 aaKnown RBP13.7□□□□□ -0.22
USP11-205ENST00000467378 H7BYZ3 331 aa13.7□□□□□ -0.22
USP11-205ENST00000467378 AZU1P20160 251 aa13.7□□□□□ -0.22
USP11-205ENST00000467378 TAS2R60P59551 318 aa13.7□□□□□ -0.22
USP11-205ENST00000467378 FLI1Q01543 452 aaPredicted RBP13.7□□□□□ -0.22
USP11-205ENST00000467378 NIPSNAP3BQ9BS92 247 aa13.7□□□□□ -0.22
USP11-205ENST00000467378 TRAV34A0A0B4J273 112 aa13.69□□□□□ -0.22
USP11-205ENST00000467378 F6UZH7 168 aa13.69□□□□□ -0.22
USP11-205ENST00000467378 TEX261Q6UWH6 196 aa13.69□□□□□ -0.22
USP11-205ENST00000467378 Q6ZQT7 251 aa13.69□□□□□ -0.22
USP11-205ENST00000467378 LYPD6BQ8NI32 183 aa13.69□□□□□ -0.22
USP11-205ENST00000467378 LOC102723971A0A1B0GUV8 181 aa13.68□□□□□ -0.22
USP11-205ENST00000467378 C11orf94C9JXX5 98 aa13.68□□□□□ -0.22
USP11-205ENST00000467378 PRNTQ86SH4 94 aa13.68□□□□□ -0.22
USP11-205ENST00000467378 TREM1Q9NP99 234 aa13.68□□□□□ -0.22
USP11-205ENST00000467378 KLF12Q9Y4X4 402 aa13.68□□□□□ -0.22
USP11-205ENST00000467378 TMEM189A5PLL7 270 aa13.67□□□□□ -0.22
USP11-205ENST00000467378 Q6AWC8 147 aa13.67□□□□□ -0.22
USP11-205ENST00000467378 C8orf49Q96NF6 230 aa13.67□□□□□ -0.22
USP11-205ENST00000467378 PYGO2Q9BRQ0 406 aa13.67□□□□□ -0.22
USP11-205ENST00000467378 LINC00467Q9BRT7 94 aa13.67□□□□□ -0.22
USP11-205ENST00000467378 HTN1P15515 57 aa13.66□□□□□ -0.22
USP11-205ENST00000467378 LGALS9CQ6DKI2 356 aa13.66□□□□□ -0.22
USP11-205ENST00000467378 ZNF680Q8NEM1 530 aa13.66□□□□□ -0.22
USP11-205ENST00000467378 TXNDC17Q9BRA2 123 aa13.66□□□□□ -0.22
USP11-205ENST00000467378 NDFIP1Q9BT67 221 aa13.66□□□□□ -0.22
USP11-205ENST00000467378 TRBV6-1A0A0K0K1D8 114 aa13.65□□□□□ -0.22
USP11-205ENST00000467378 SCO2A0A1W2PP80 73 aa13.65□□□□□ -0.22
USP11-205ENST00000467378 PLAC8L1A1L4L8 177 aa13.65□□□□□ -0.22
USP11-205ENST00000467378 IFNA1P01562 189 aa13.65□□□□□ -0.22
USP11-205ENST00000467378 EMP1P54849 157 aa13.65□□□□□ -0.22
USP11-205ENST00000467378 TMEM183BQ1AE95 376 aa13.65□□□□□ -0.22
USP11-205ENST00000467378 SAPCD1Q5SSQ6 148 aa13.65□□□□□ -0.22
USP11-205ENST00000467378 C11orf45Q8TAV5 145 aa13.65□□□□□ -0.22
USP11-205ENST00000467378 C2CD4CQ8TF44 421 aa13.65□□□□□ -0.22
USP11-205ENST00000467378 FMC1Q96HJ9 113 aa13.65□□□□□ -0.22
USP11-205ENST00000467378 CELA1Q9UNI1 258 aa13.65□□□□□ -0.22
USP11-205ENST00000467378 BCL2P10415 239 aa13.64□□□□□ -0.23
USP11-205ENST00000467378 AKR1C3P42330 323 aa13.64□□□□□ -0.23
USP11-205ENST00000467378 ZNF80P51504 273 aaPredicted RBP13.64□□□□□ -0.23
USP11-205ENST00000467378 ZNF493Q6ZR52 646 aa13.64□□□□□ -0.23
USP11-205ENST00000467378 Q86TA4 180 aa13.64□□□□□ -0.23
USP11-205ENST00000467378 RNASE8Q8TDE3 154 aaKnown RBP13.64□□□□□ -0.23
USP11-205ENST00000467378 C16orf74Q96GX8 76 aa13.64□□□□□ -0.23
USP11-205ENST00000467378 IGHV1OR15-1A0A075B7D0 117 aa13.63□□□□□ -0.23
USP11-205ENST00000467378 NANOS2P60321 138 aaKnown RBP13.63□□□□□ -0.23
USP11-205ENST00000467378 UBE2G1P62253 170 aa13.63□□□□□ -0.23
USP11-205ENST00000467378 MEF2BQ02080 365 aaPredicted RBP13.63□□□□□ -0.23
USP11-205ENST00000467378 ANXA2RQ3ZCQ2 193 aa13.63□□□□□ -0.23
USP11-205ENST00000467378 SMUG1Q53HV7 270 aa13.63□□□□□ -0.23
USP11-205ENST00000467378 EIF4E3Q8N5X7 224 aaKnown RBP13.63□□□□□ -0.23
USP11-205ENST00000467378 TMEM263Q8WUH6 116 aaKnown RBP13.63□□□□□ -0.23
USP11-205ENST00000467378 C11orf52Q96A22 123 aa13.63□□□□□ -0.23
USP11-205ENST00000467378 DKK2Q9UBU2 259 aa13.63□□□□□ -0.23
USP11-205ENST00000467378 VAX2Q9UIW0 290 aa13.63□□□□□ -0.23
USP11-205ENST00000467378 TRAV21A0A0B4J279 112 aa13.62□□□□□ -0.23
USP11-205ENST00000467378 S100A9P06702 114 aaKnown RBP13.62□□□□□ -0.23
USP11-205ENST00000467378 TAGLN2P37802 199 aaKnown RBP13.62□□□□□ -0.23
USP11-205ENST00000467378 FAM222AQ5U5X8 452 aa13.62□□□□□ -0.23
USP11-205ENST00000467378 ZFP30Q9Y2G7 519 aa13.62□□□□□ -0.23
USP11-205ENST00000467378 RGS13O14921 159 aa13.61□□□□□ -0.23
USP11-205ENST00000467378 GCGP01275 180 aa13.61□□□□□ -0.23
USP11-205ENST00000467378 LTAP01374 205 aa13.61□□□□□ -0.23
USP11-205ENST00000467378 SPART-AS1P0CW21 52 aa13.61□□□□□ -0.23
USP11-205ENST00000467378 COX8CQ7Z4L0 72 aa13.61□□□□□ -0.23
USP11-205ENST00000467378 TP53TG3Q9ULZ0 132 aa13.61□□□□□ -0.23
USP11-205ENST00000467378 RBFOX3A6NFN3 312 aa13.6□□□□□ -0.23
USP11-205ENST00000467378 CBY3A6NI87 242 aa13.6□□□□□ -0.23
USP11-205ENST00000467378 C12orf74Q32Q52 190 aa13.6□□□□□ -0.23
USP11-205ENST00000467378 MUC21Q5SSG8 566 aa13.6□□□□□ -0.23
USP11-205ENST00000467378 C11orf72Q8NBR9 251 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms