RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 TCTE3Q8IZS6 198 aa9.14□□□□□ -0.95
COL5A1-206ENST00000465877 EIF4E3Q8N5X7 224 aaKnown RBP9.14□□□□□ -0.95
COL5A1-206ENST00000465877 LINC00467Q9BRT7 94 aa9.14□□□□□ -0.95
COL5A1-206ENST00000465877 MAP1LC3BQ9GZQ8 125 aa9.14□□□□□ -0.95
COL5A1-206ENST00000465877 NOP10Q9NPE3 64 aaKnown RBP9.14□□□□□ -0.95
COL5A1-206ENST00000465877 DNAH10Q8IVF4 4471 aa9.14□□□□□ -0.95
COL5A1-206ENST00000465877 DNAH2Q9P225 4427 aa9.13□□□□□ -0.95
COL5A1-206ENST00000465877 SERTM2A0A1B0GWG4 89 aa9.13□□□□□ -0.95
COL5A1-206ENST00000465877 CBY3A6NI87 242 aa9.13□□□□□ -0.95
COL5A1-206ENST00000465877 PFDN1O60925 122 aa9.13□□□□□ -0.95
COL5A1-206ENST00000465877 TCRAP04437 139 aa9.13□□□□□ -0.95
COL5A1-206ENST00000465877 Q6ZQT7 251 aa9.13□□□□□ -0.95
COL5A1-206ENST00000465877 NDUFAF3Q9BU61 184 aa9.13□□□□□ -0.95
COL5A1-206ENST00000465877 IGHV1OR15-1A0A075B7D0 117 aa9.12□□□□□ -0.95
COL5A1-206ENST00000465877 A0A1W2PRE2 83 aa9.12□□□□□ -0.95
COL5A1-206ENST00000465877 RGS13O14921 159 aa9.12□□□□□ -0.95
COL5A1-206ENST00000465877 SEC11BP0C7V7 166 aa9.12□□□□□ -0.95
COL5A1-206ENST00000465877 ANXA2RQ3ZCQ2 193 aa9.12□□□□□ -0.95
COL5A1-206ENST00000465877 Q6AWC8 147 aa9.12□□□□□ -0.95
COL5A1-206ENST00000465877 TMUB2Q71RG4 321 aa9.12□□□□□ -0.95
COL5A1-206ENST00000465877 LINC00612Q8N6U2 182 aa9.12□□□□□ -0.95
COL5A1-206ENST00000465877 C11orf72Q8NBR9 251 aa9.12□□□□□ -0.95
COL5A1-206ENST00000465877 TMPRSS5Q9H3S3 457 aa9.12□□□□□ -0.95
COL5A1-206ENST00000465877 hCG_2014768A0A024R1R8 64 aa9.11□□□□□ -0.95
COL5A1-206ENST00000465877 F6UZH7 168 aa9.11□□□□□ -0.95
COL5A1-206ENST00000465877 K7EQM0 130 aa9.11□□□□□ -0.95
COL5A1-206ENST00000465877 ATP5G1P05496 136 aa9.11□□□□□ -0.95
COL5A1-206ENST00000465877 ATP5G3P48201 142 aa9.11□□□□□ -0.95
COL5A1-206ENST00000465877 FHITP49789 147 aa9.11□□□□□ -0.95
COL5A1-206ENST00000465877 UBE2G2P60604 165 aa9.11□□□□□ -0.95
COL5A1-206ENST00000465877 SUMO1P63165 101 aaKnown RBP9.11□□□□□ -0.95
COL5A1-206ENST00000465877 IBA57Q5T440 356 aaKnown RBP9.11□□□□□ -0.95
COL5A1-206ENST00000465877 TMEM88Q6PEY1 159 aa9.11□□□□□ -0.95
COL5A1-206ENST00000465877 CYB561D1Q8N8Q1 229 aa9.11□□□□□ -0.95
COL5A1-206ENST00000465877 FAM210BQ96KR6 192 aa9.11□□□□□ -0.95
COL5A1-206ENST00000465877 ATG101Q9BSB4 218 aa9.11□□□□□ -0.95
COL5A1-206ENST00000465877 GSN-AS1Q9NRJ2 163 aa9.11□□□□□ -0.95
COL5A1-206ENST00000465877 EPPK1P58107 5090 aaKnown RBP9.11□□□□□ -0.95
COL5A1-206ENST00000465877 NACAE9PAV3 2078 aa9.11□□□□□ -0.95
COL5A1-206ENST00000465877 UMAD1C9J7I0 102 aa9.1□□□□□ -0.95
COL5A1-206ENST00000465877 TPT1P13693 172 aaKnown RBP9.1□□□□□ -0.95
COL5A1-206ENST00000465877 TCL1AP56279 114 aa9.1□□□□□ -0.95
COL5A1-206ENST00000465877 EIF5AP63241 154 aaKnown RBP9.1□□□□□ -0.95
COL5A1-206ENST00000465877 ZNF415Q09FC8 603 aa9.1□□□□□ -0.95
COL5A1-206ENST00000465877 DAZ2Q13117 558 aaKnown RBP9.1□□□□□ -0.95
COL5A1-206ENST00000465877 MUC21Q5SSG8 566 aa9.1□□□□□ -0.95
COL5A1-206ENST00000465877 AKAP14Q86UN6 197 aa9.1□□□□□ -0.95
COL5A1-206ENST00000465877 TMEM75Q8N9X5 138 aa9.1□□□□□ -0.95
COL5A1-206ENST00000465877 STOML3Q8TAV4 291 aa9.1□□□□□ -0.95
COL5A1-206ENST00000465877 TVP23CQ96ET8 276 aa9.1□□□□□ -0.95
COL5A1-206ENST00000465877 SGK494Q96LW2 274 aa9.1□□□□□ -0.95
COL5A1-206ENST00000465877 NDFIP1Q9BT67 221 aa9.1□□□□□ -0.95
COL5A1-206ENST00000465877 TREM1Q9NP99 234 aa9.1□□□□□ -0.95
COL5A1-206ENST00000465877 TP53TG3Q9ULZ0 132 aa9.1□□□□□ -0.95
COL5A1-206ENST00000465877 EPDR1Q9UM22 224 aa9.1□□□□□ -0.95
COL5A1-206ENST00000465877 GAGE12BA1L429 117 aa9.09□□□□□ -0.95
COL5A1-206ENST00000465877 FAM74A7A6NL05 159 aa9.09□□□□□ -0.95
COL5A1-206ENST00000465877 GAGE7O76087 117 aa9.09□□□□□ -0.95
COL5A1-206ENST00000465877 C1QBP02746 253 aa9.09□□□□□ -0.95
COL5A1-206ENST00000465877 GAGE12FP0CL80 117 aa9.09□□□□□ -0.95
COL5A1-206ENST00000465877 GAGE12GP0CL81 117 aa9.09□□□□□ -0.95
COL5A1-206ENST00000465877 GAGE12IP0CL82 117 aa9.09□□□□□ -0.95
COL5A1-206ENST00000465877 Q6ZTI0 123 aa9.09□□□□□ -0.95
COL5A1-206ENST00000465877 FAM213BQ8TBF2 198 aa9.09□□□□□ -0.95
COL5A1-206ENST00000465877 NAGKQ9UJ70 344 aa9.09□□□□□ -0.95
COL5A1-206ENST00000465877 F5H768 121 aa9.08□□□□□ -0.96
COL5A1-206ENST00000465877 IGLV2-11P01706 119 aa9.08□□□□□ -0.96
COL5A1-206ENST00000465877 P0DMU3 169 aa9.08□□□□□ -0.96
COL5A1-206ENST00000465877 FAM231AP0DMU4 169 aa9.08□□□□□ -0.96
COL5A1-206ENST00000465877 FAM231CP0DMU5 169 aa9.08□□□□□ -0.96
COL5A1-206ENST00000465877 FLI1Q01543 452 aaPredicted RBP9.08□□□□□ -0.96
COL5A1-206ENST00000465877 ZFP69Q49AA0 526 aa9.08□□□□□ -0.96
COL5A1-206ENST00000465877 FAM159AQ6UWV7 190 aa9.08□□□□□ -0.96
COL5A1-206ENST00000465877 PSG8Q9UQ74 426 aa9.08□□□□□ -0.96
COL5A1-206ENST00000465877 KLF12Q9Y4X4 402 aa9.08□□□□□ -0.96
COL5A1-206ENST00000465877 TRGV11A0A075B6L2 103 aa9.07□□□□□ -0.96
COL5A1-206ENST00000465877 TRGV1A0A0A0MS02 117 aa9.07□□□□□ -0.96
COL5A1-206ENST00000465877 TRAV21A0A0B4J279 112 aa9.07□□□□□ -0.96
COL5A1-206ENST00000465877 FBLL1A6NHQ2 334 aaKnown RBP9.07□□□□□ -0.96
COL5A1-206ENST00000465877 PEX7O00628 323 aa9.07□□□□□ -0.96
COL5A1-206ENST00000465877 SPINK4O60575 86 aa9.07□□□□□ -0.96
COL5A1-206ENST00000465877 IFNA7P01567 189 aa9.07□□□□□ -0.96
COL5A1-206ENST00000465877 LGALSLQ3ZCW2 172 aaPredicted RBP9.07□□□□□ -0.96
COL5A1-206ENST00000465877 DPPA3Q6W0C5 159 aa9.07□□□□□ -0.96
COL5A1-206ENST00000465877 PRNTQ86SH4 94 aa9.07□□□□□ -0.96
COL5A1-206ENST00000465877 Q86TA4 180 aa9.07□□□□□ -0.96
COL5A1-206ENST00000465877 C15orf53Q8NAA6 179 aa9.07□□□□□ -0.96
COL5A1-206ENST00000465877 C8orf49Q96NF6 230 aa9.07□□□□□ -0.96
COL5A1-206ENST00000465877 NKX6-2Q9C056 277 aaPredicted RBP9.07□□□□□ -0.96
COL5A1-206ENST00000465877 ARL2-SNX15V9GYD0 113 aa9.07□□□□□ -0.96
COL5A1-206ENST00000465877 MUC4Q99102 2169 aa9.07□□□□□ -0.96
COL5A1-206ENST00000465877 HECTD4Q9Y4D8 3996 aa9.06□□□□□ -0.96
COL5A1-206ENST00000465877 A0A1B0GV50 99 aa9.06□□□□□ -0.96
COL5A1-206ENST00000465877 GCGP01275 180 aa9.06□□□□□ -0.96
COL5A1-206ENST00000465877 PPT1P50897 306 aa9.06□□□□□ -0.96
COL5A1-206ENST00000465877 TMEM183BQ1AE95 376 aa9.06□□□□□ -0.96
COL5A1-206ENST00000465877 TDRG1Q3Y452 100 aa9.06□□□□□ -0.96
COL5A1-206ENST00000465877 TMEM183AQ8IXX5 376 aa9.06□□□□□ -0.96
COL5A1-206ENST00000465877 HIST1H2BAQ96A08 127 aa9.06□□□□□ -0.96
COL5A1-206ENST00000465877 C18orf15Q96N68 181 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms