RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 TRAV8-1A0A0A6YYK1 113 aa12.19□□□□□ -0.46
USP39-211ENST00000465282 DEFB4AO15263 64 aa12.19□□□□□ -0.46
USP39-211ENST00000465282 IGLV2-11P01706 119 aa12.19□□□□□ -0.46
USP39-211ENST00000465282 CCL20P78556 96 aa12.19□□□□□ -0.46
USP39-211ENST00000465282 BTN1A1Q13410 526 aa12.19□□□□□ -0.46
USP39-211ENST00000465282 Q6AWC8 147 aa12.19□□□□□ -0.46
USP39-211ENST00000465282 C11orf45Q8TAV5 145 aa12.19□□□□□ -0.46
USP39-211ENST00000465282 GNG13Q9P2W3 67 aa12.19□□□□□ -0.46
USP39-211ENST00000465282 KLF12Q9Y4X4 402 aa12.19□□□□□ -0.46
USP39-211ENST00000465282 ZNF705GA8MUZ8 300 aaPredicted RBP12.18□□□□□ -0.46
USP39-211ENST00000465282 C11orf94C9JXX5 98 aa12.18□□□□□ -0.46
USP39-211ENST00000465282 S100A9P06702 114 aaKnown RBP12.18□□□□□ -0.46
USP39-211ENST00000465282 ATP5G3P48201 142 aa12.18□□□□□ -0.46
USP39-211ENST00000465282 TMEM263Q8WUH6 116 aaKnown RBP12.18□□□□□ -0.46
USP39-211ENST00000465282 C16orf74Q96GX8 76 aa12.18□□□□□ -0.46
USP39-211ENST00000465282 FMC1Q96HJ9 113 aa12.18□□□□□ -0.46
USP39-211ENST00000465282 TRBV6-1A0A0K0K1D8 114 aa12.17□□□□□ -0.46
USP39-211ENST00000465282 CXorf65A6NEN9 183 aa12.17□□□□□ -0.46
USP39-211ENST00000465282 SPART-AS1P0CW21 52 aa12.17□□□□□ -0.46
USP39-211ENST00000465282 LYPD6BQ8NI32 183 aa12.17□□□□□ -0.46
USP39-211ENST00000465282 TVP23CQ96ET8 276 aa12.17□□□□□ -0.46
USP39-211ENST00000465282 ZFP30Q9Y2G7 519 aa12.17□□□□□ -0.46
USP39-211ENST00000465282 TRAV21A0A0B4J279 112 aa12.16□□□□□ -0.46
USP39-211ENST00000465282 HTN1P15515 57 aa12.16□□□□□ -0.46
USP39-211ENST00000465282 UBE2G1P62253 170 aa12.16□□□□□ -0.46
USP39-211ENST00000465282 ANXA2RQ3ZCQ2 193 aa12.16□□□□□ -0.46
USP39-211ENST00000465282 SMUG1Q53HV7 270 aa12.16□□□□□ -0.46
USP39-211ENST00000465282 PRR9Q5T870 116 aa12.16□□□□□ -0.46
USP39-211ENST00000465282 TEX261Q6UWH6 196 aa12.16□□□□□ -0.46
USP39-211ENST00000465282 PRNTQ86SH4 94 aa12.16□□□□□ -0.46
USP39-211ENST00000465282 EIF4E3Q8N5X7 224 aaKnown RBP12.16□□□□□ -0.46
USP39-211ENST00000465282 RNASE8Q8TDE3 154 aaKnown RBP12.16□□□□□ -0.46
USP39-211ENST00000465282 SGK494Q96LW2 274 aa12.16□□□□□ -0.46
USP39-211ENST00000465282 RGS13O14921 159 aa12.15□□□□□ -0.46
USP39-211ENST00000465282 AKR1C3P42330 323 aa12.15□□□□□ -0.46
USP39-211ENST00000465282 MEF2BQ02080 365 aaPredicted RBP12.15□□□□□ -0.46
USP39-211ENST00000465282 TMEM183BQ1AE95 376 aa12.15□□□□□ -0.46
USP39-211ENST00000465282 ZNF680Q8NEM1 530 aa12.15□□□□□ -0.46
USP39-211ENST00000465282 LINC00479Q96M42 142 aa12.15□□□□□ -0.46
USP39-211ENST00000465282 DKK2Q9UBU2 259 aa12.15□□□□□ -0.46
USP39-211ENST00000465282 VAX2Q9UIW0 290 aa12.15□□□□□ -0.46
USP39-211ENST00000465282 IGHV1OR15-1A0A075B7D0 117 aa12.14□□□□□ -0.47
USP39-211ENST00000465282 TRAV34A0A0B4J273 112 aa12.14□□□□□ -0.47
USP39-211ENST00000465282 LYRM9A8MSI8 78 aa12.14□□□□□ -0.47
USP39-211ENST00000465282 PDE6DO43924 150 aa12.14□□□□□ -0.47
USP39-211ENST00000465282 BCL2P10415 239 aa12.14□□□□□ -0.47
USP39-211ENST00000465282 AZU1P20160 251 aa12.14□□□□□ -0.47
USP39-211ENST00000465282 EMP1P54849 157 aa12.14□□□□□ -0.47
USP39-211ENST00000465282 FAM159AQ6UWV7 190 aa12.14□□□□□ -0.47
USP39-211ENST00000465282 COX8CQ7Z4L0 72 aa12.14□□□□□ -0.47
USP39-211ENST00000465282 Q86TA4 180 aa12.14□□□□□ -0.47
USP39-211ENST00000465282 C2CD4CQ8TF44 421 aa12.14□□□□□ -0.47
USP39-211ENST00000465282 TIMM8BQ9Y5J9 83 aaPredicted RBP12.14□□□□□ -0.47
USP39-211ENST00000465282 CBY3A6NI87 242 aa12.13□□□□□ -0.47
USP39-211ENST00000465282 PRM2P04554 102 aa12.13□□□□□ -0.47
USP39-211ENST00000465282 TDRG1Q3Y452 100 aa12.13□□□□□ -0.47
USP39-211ENST00000465282 C11orf52Q96A22 123 aa12.13□□□□□ -0.47
USP39-211ENST00000465282 SCO2A0A1W2PP80 73 aa12.12□□□□□ -0.47
USP39-211ENST00000465282 PLAC8L1A1L4L8 177 aa12.12□□□□□ -0.47
USP39-211ENST00000465282 SNURFLB1AK76 121 aa12.12□□□□□ -0.47
USP39-211ENST00000465282 LTAP01374 205 aa12.12□□□□□ -0.47
USP39-211ENST00000465282 PFN1P07737 140 aaKnown RBP12.12□□□□□ -0.47
USP39-211ENST00000465282 NANOS2P60321 138 aaKnown RBP12.12□□□□□ -0.47
USP39-211ENST00000465282 IBA57Q5T440 356 aaKnown RBP12.12□□□□□ -0.47
USP39-211ENST00000465282 FAM222AQ5U5X8 452 aa12.12□□□□□ -0.47
USP39-211ENST00000465282 KCNS1Q96KK3 526 aa12.12□□□□□ -0.47
USP39-211ENST00000465282 NUPR2A6NF83 97 aa12.11□□□□□ -0.47
USP39-211ENST00000465282 GCGP01275 180 aa12.11□□□□□ -0.47
USP39-211ENST00000465282 DAZ2Q13117 558 aaKnown RBP12.11□□□□□ -0.47
USP39-211ENST00000465282 CASC10Q5T4H9 136 aa12.11□□□□□ -0.47
USP39-211ENST00000465282 C8orf49Q96NF6 230 aa12.11□□□□□ -0.47
USP39-211ENST00000465282 CELA1Q9UNI1 258 aa12.11□□□□□ -0.47
USP39-211ENST00000465282 CSMD3Q7Z407 3707 aa12.11□□□□□ -0.47
USP39-211ENST00000465282 FABP5P3A8MUU1 101 aa12.1□□□□□ -0.47
USP39-211ENST00000465282 NDUFS6O75380 124 aaKnown RBP12.1□□□□□ -0.47
USP39-211ENST00000465282 C12orf74Q32Q52 190 aa12.1□□□□□ -0.47
USP39-211ENST00000465282 TMEM183AQ8IXX5 376 aa12.1□□□□□ -0.47
USP39-211ENST00000465282 PHLDA1Q8WV24 401 aaPredicted RBP12.1□□□□□ -0.47
USP39-211ENST00000465282 TRGV11A0A075B6L2 103 aa12.09□□□□□ -0.47
USP39-211ENST00000465282 RBFOX3A6NFN3 312 aa12.09□□□□□ -0.47
USP39-211ENST00000465282 CEMP1Q6PRD7 247 aaPredicted RBP12.09□□□□□ -0.47
USP39-211ENST00000465282 Q6ZQT7 251 aa12.09□□□□□ -0.47
USP39-211ENST00000465282 C11orf72Q8NBR9 251 aa12.09□□□□□ -0.47
USP39-211ENST00000465282 TP53TG3Q9ULZ0 132 aa12.09□□□□□ -0.47
USP39-211ENST00000465282 KLK5Q9Y337 293 aaPredicted RBP12.09□□□□□ -0.47
USP39-211ENST00000465282 TRAV10A0A0B4J240 114 aa12.08□□□□□ -0.48
USP39-211ENST00000465282 RPL35P42766 123 aaKnown RBP12.08□□□□□ -0.48
USP39-211ENST00000465282 ZNF80P51504 273 aaPredicted RBP12.08□□□□□ -0.48
USP39-211ENST00000465282 TCL1AP56279 114 aa12.08□□□□□ -0.48
USP39-211ENST00000465282 DAD1P61803 113 aa12.08□□□□□ -0.48
USP39-211ENST00000465282 ZNF415Q09FC8 603 aa12.08□□□□□ -0.48
USP39-211ENST00000465282 MUC21Q5SSG8 566 aa12.08□□□□□ -0.48
USP39-211ENST00000465282 ZFAND6Q6FIF0 208 aa12.08□□□□□ -0.48
USP39-211ENST00000465282 BAGE2Q86Y30 109 aa12.08□□□□□ -0.48
USP39-211ENST00000465282 SMIM12Q96EX1 92 aa12.08□□□□□ -0.48
USP39-211ENST00000465282 SDF2L1Q9HCN8 221 aa12.08□□□□□ -0.48
USP39-211ENST00000465282 NOP10Q9NPE3 64 aaKnown RBP12.08□□□□□ -0.48
USP39-211ENST00000465282 TENM2Q9NT68 2774 aa12.08□□□□□ -0.48
USP39-211ENST00000465282 ZNF506Q5JVG8 444 aa12.07□□□□□ -0.48
USP39-211ENST00000465282 FAM162BQ5T6X4 162 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms