RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 DAZAP1Q96EP5 407 aaKnown RBP11.09□□□□□ -0.63
HDAC6-213ENST00000462730 LAMTOR2Q9Y2Q5 125 aa11.09□□□□□ -0.63
HDAC6-213ENST00000462730 OTOGQ6ZRI0 2925 aa11.09□□□□□ -0.63
HDAC6-213ENST00000462730 DNAJC9-AS1A6NH13 148 aa11.08□□□□□ -0.64
HDAC6-213ENST00000462730 ZC2HC1AQ96GY0 325 aa11.08□□□□□ -0.64
HDAC6-213ENST00000462730 NOTCH2Q04721 2471 aa11.08□□□□□ -0.64
HDAC6-213ENST00000462730 TMEM89A2RUT3 159 aa11.08□□□□□ -0.64
HDAC6-213ENST00000462730 RNASE8Q8TDE3 154 aaKnown RBP11.08□□□□□ -0.64
HDAC6-213ENST00000462730 SLC50A1Q9BRV3 221 aa11.08□□□□□ -0.64
HDAC6-213ENST00000462730 NTF3P20783 257 aa11.07□□□□□ -0.64
HDAC6-213ENST00000462730 GLMPQ8WWB7 406 aa11.07□□□□□ -0.64
HDAC6-213ENST00000462730 BORCS7Q96B45 105 aa11.07□□□□□ -0.64
HDAC6-213ENST00000462730 PEF1Q9UBV8 284 aaKnown RBP11.07□□□□□ -0.64
HDAC6-213ENST00000462730 CT83Q5H943 113 aa11.07□□□□□ -0.64
HDAC6-213ENST00000462730 LCN12Q6JVE5 192 aa11.07□□□□□ -0.64
HDAC6-213ENST00000462730 RNF182Q8N6D2 247 aa11.07□□□□□ -0.64
HDAC6-213ENST00000462730 ZNF738Q8NE65 137 aa11.07□□□□□ -0.64
HDAC6-213ENST00000462730 NUP35Q8NFH5 326 aa11.07□□□□□ -0.64
HDAC6-213ENST00000462730 C8orf49Q96NF6 230 aa11.07□□□□□ -0.64
HDAC6-213ENST00000462730 ESM1Q9NQ30 184 aa11.07□□□□□ -0.64
HDAC6-213ENST00000462730 TCF21O43680 179 aa11.06□□□□□ -0.64
HDAC6-213ENST00000462730 GDF5OSQ5U4N7 250 aa11.06□□□□□ -0.64
HDAC6-213ENST00000462730 Q6ZN92 141 aa11.06□□□□□ -0.64
HDAC6-213ENST00000462730 C8orf86Q6ZUL3 223 aa11.06□□□□□ -0.64
HDAC6-213ENST00000462730 Q8N2B8 174 aa11.06□□□□□ -0.64
HDAC6-213ENST00000462730 TMEM160Q9NX00 188 aa11.06□□□□□ -0.64
HDAC6-213ENST00000462730 A6NJY4 79 aa11.05□□□□□ -0.64
HDAC6-213ENST00000462730 A8MWL6 223 aa11.05□□□□□ -0.64
HDAC6-213ENST00000462730 TFPI2P48307 235 aa11.05□□□□□ -0.64
HDAC6-213ENST00000462730 TCF24Q7RTU0 167 aa11.05□□□□□ -0.64
HDAC6-213ENST00000462730 VGLL1Q99990 258 aa11.05□□□□□ -0.64
HDAC6-213ENST00000462730 TRAV8-2A0A0B4J237 113 aa11.05□□□□□ -0.64
HDAC6-213ENST00000462730 FAM181BA6NEQ2 426 aa11.05□□□□□ -0.64
HDAC6-213ENST00000462730 FBLL1A6NHQ2 334 aaKnown RBP11.05□□□□□ -0.64
HDAC6-213ENST00000462730 HIGD1CA8MV81 97 aa11.05□□□□□ -0.64
HDAC6-213ENST00000462730 PRAC2D3DTV9 90 aa11.05□□□□□ -0.64
HDAC6-213ENST00000462730 NPIPB6E9PJ23 425 aa11.05□□□□□ -0.64
HDAC6-213ENST00000462730 PTTG1IPP53801 180 aa11.05□□□□□ -0.64
HDAC6-213ENST00000462730 UBE2V1Q13404 147 aa11.05□□□□□ -0.64
HDAC6-213ENST00000462730 FOXE3Q13461 319 aa11.05□□□□□ -0.64
HDAC6-213ENST00000462730 KLF5Q13887 457 aaPredicted RBP11.05□□□□□ -0.64
HDAC6-213ENST00000462730 HSBP1O75506 76 aa11.04□□□□□ -0.64
HDAC6-213ENST00000462730 LY6G6DO95868 133 aa11.04□□□□□ -0.64
HDAC6-213ENST00000462730 SCGB2A2Q13296 93 aa11.04□□□□□ -0.64
HDAC6-213ENST00000462730 Q8TAT8 98 aa11.04□□□□□ -0.64
HDAC6-213ENST00000462730 COX11Q9Y6N1 276 aa11.04□□□□□ -0.64
HDAC6-213ENST00000462730 ELANEP08246 267 aa11.03□□□□□ -0.64
HDAC6-213ENST00000462730 CT45A10P0DMU9 189 aa11.03□□□□□ -0.64
HDAC6-213ENST00000462730 SRD5A1P18405 259 aa11.03□□□□□ -0.64
HDAC6-213ENST00000462730 BMI1P35226 326 aa11.03□□□□□ -0.64
HDAC6-213ENST00000462730 TM4SF20Q53R12 229 aa11.03□□□□□ -0.64
HDAC6-213ENST00000462730 PET117Q6UWS5 81 aa11.03□□□□□ -0.64
HDAC6-213ENST00000462730 ALKBH7Q9BT30 221 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-213ENST00000462730 TRAV9-2A0A087WT02 112 aa11.03□□□□□ -0.64
HDAC6-213ENST00000462730 IGHV7-4-1A0A0J9YVY3 117 aa11.03□□□□□ -0.64
HDAC6-213ENST00000462730 CRIP1P50238 77 aa11.03□□□□□ -0.64
HDAC6-213ENST00000462730 ERCC8Q13216 396 aa11.03□□□□□ -0.64
HDAC6-213ENST00000462730 FAM106AQ4KMX7 169 aa11.03□□□□□ -0.64
HDAC6-213ENST00000462730 ATP5L2Q7Z4Y8 100 aa11.03□□□□□ -0.64
HDAC6-213ENST00000462730 ATOH7Q8N100 152 aa11.03□□□□□ -0.64
HDAC6-213ENST00000462730 GTSF1Q8WW33 167 aa11.03□□□□□ -0.64
HDAC6-213ENST00000462730 C16orf92Q96LL3 132 aa11.03□□□□□ -0.64
HDAC6-213ENST00000462730 PRR25Q96S07 402 aa11.03□□□□□ -0.64
HDAC6-213ENST00000462730 SSBP4Q9BWG4 385 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-213ENST00000462730 DAZ1Q9NQZ3 744 aaKnown RBP11.03□□□□□ -0.64
HDAC6-213ENST00000462730 M0R2Z0 102 aa11.02□□□□□ -0.65
HDAC6-213ENST00000462730 TSPOP30536 169 aa11.02□□□□□ -0.65
HDAC6-213ENST00000462730 Q6ZSV7 163 aa11.02□□□□□ -0.65
HDAC6-213ENST00000462730 STPG4Q8N801 248 aa11.02□□□□□ -0.65
HDAC6-213ENST00000462730 MRPL53Q96EL3 112 aaKnown RBP11.02□□□□□ -0.65
HDAC6-213ENST00000462730 A0A1B0GXF2 115 aa11.01□□□□□ -0.65
HDAC6-213ENST00000462730 CAMPP49913 170 aa11.01□□□□□ -0.65
HDAC6-213ENST00000462730 RNASEKQ6P5S7 137 aaKnown RBP11.01□□□□□ -0.65
HDAC6-213ENST00000462730 GPHB5Q86YW7 130 aa11.01□□□□□ -0.65
HDAC6-213ENST00000462730 MYOZ3Q8TDC0 251 aa11.01□□□□□ -0.65
HDAC6-213ENST00000462730 PGLYRP4Q96LB8 373 aa11.01□□□□□ -0.65
HDAC6-213ENST00000462730 RHPN1-AS1Q9BWJ2 59 aa11.01□□□□□ -0.65
HDAC6-213ENST00000462730 GFRA4Q9GZZ7 299 aa11.01□□□□□ -0.65
HDAC6-213ENST00000462730 MTORP42345 2549 aa11.01□□□□□ -0.65
HDAC6-213ENST00000462730 RBAKDNA6NC62 111 aa11.01□□□□□ -0.65
HDAC6-213ENST00000462730 SH2D1AO60880 128 aa11.01□□□□□ -0.65
HDAC6-213ENST00000462730 LGALS1P09382 135 aaKnown RBP11.01□□□□□ -0.65
HDAC6-213ENST00000462730 EBLN2Q6P2I7 272 aa11.01□□□□□ -0.65
HDAC6-213ENST00000462730 RBPMS2Q6ZRY4 209 aaKnown RBP11.01□□□□□ -0.65
HDAC6-213ENST00000462730 NDFIP1Q9BT67 221 aa11.01□□□□□ -0.65
HDAC6-213ENST00000462730 K7EMT4 169 aa11□□□□□ -0.65
HDAC6-213ENST00000462730 COX8CQ7Z4L0 72 aa11□□□□□ -0.65
HDAC6-213ENST00000462730 RNF152Q8N8N0 203 aa11□□□□□ -0.65
HDAC6-213ENST00000462730 SMPXQ9UHP9 88 aa11□□□□□ -0.65
HDAC6-213ENST00000462730 UFC1Q9Y3C8 167 aa11□□□□□ -0.65
HDAC6-213ENST00000462730 HIVEP2P31629 2446 aa11□□□□□ -0.65
HDAC6-213ENST00000462730 FAM231BA6NCW3 169 aa10.99□□□□□ -0.65
HDAC6-213ENST00000462730 C2orf70A6NJV1 201 aa10.99□□□□□ -0.65
HDAC6-213ENST00000462730 TMEM238C9JI98 176 aa10.99□□□□□ -0.65
HDAC6-213ENST00000462730 EDN2P20800 178 aa10.99□□□□□ -0.65
HDAC6-213ENST00000462730 RPL11P62913 178 aaKnown RBP10.99□□□□□ -0.65
HDAC6-213ENST00000462730 C20orf173Q96LM9 149 aa10.99□□□□□ -0.65
HDAC6-213ENST00000462730 ST20Q9HBF5 79 aa10.99□□□□□ -0.65
HDAC6-213ENST00000462730 CLEC5AQ9NY25 188 aa10.99□□□□□ -0.65
HDAC6-213ENST00000462730 RNASE1P07998 156 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms