RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 TSPOP30536 169 aa11.27□□□□□ -0.61
TMEM39A-203ENST00000461654 LEPP41159 167 aa11.27□□□□□ -0.61
TMEM39A-203ENST00000461654 ACTL10Q5JWF8 245 aa11.27□□□□□ -0.61
TMEM39A-203ENST00000461654 FAM231DQ6ZW35 169 aa11.27□□□□□ -0.61
TMEM39A-203ENST00000461654 GTSCR1Q86UQ5 136 aa11.27□□□□□ -0.61
TMEM39A-203ENST00000461654 ZC2HC1AQ96GY0 325 aa11.27□□□□□ -0.61
TMEM39A-203ENST00000461654 C8orf49Q96NF6 230 aa11.27□□□□□ -0.61
TMEM39A-203ENST00000461654 ODF3Q96PU9 254 aa11.27□□□□□ -0.61
TMEM39A-203ENST00000461654 ASCL2Q99929 193 aa11.27□□□□□ -0.61
TMEM39A-203ENST00000461654 B9D2Q9BPU9 175 aa11.27□□□□□ -0.61
TMEM39A-203ENST00000461654 FAM110AQ9BQ89 295 aa11.27□□□□□ -0.61
TMEM39A-203ENST00000461654 SMCO4Q9NRQ5 59 aa11.27□□□□□ -0.61
TMEM39A-203ENST00000461654 TMEM242Q9NWH2 141 aa11.27□□□□□ -0.61
TMEM39A-203ENST00000461654 DNAH3Q8TD57 4116 aa11.27□□□□□ -0.61
TMEM39A-203ENST00000461654 KNCNA6PVL3 124 aa11.26□□□□□ -0.61
TMEM39A-203ENST00000461654 GATCO43716 136 aaKnown RBP11.26□□□□□ -0.61
TMEM39A-203ENST00000461654 P01737 135 aa11.26□□□□□ -0.61
TMEM39A-203ENST00000461654 FAM162BQ5T6X4 162 aa11.26□□□□□ -0.61
TMEM39A-203ENST00000461654 COX8CQ7Z4L0 72 aa11.26□□□□□ -0.61
TMEM39A-203ENST00000461654 CXorf65A6NEN9 183 aa11.25□□□□□ -0.61
TMEM39A-203ENST00000461654 ZNF705GA8MUZ8 300 aaPredicted RBP11.25□□□□□ -0.61
TMEM39A-203ENST00000461654 SCO1O75880 301 aa11.25□□□□□ -0.61
TMEM39A-203ENST00000461654 IGKV3-20P01619 116 aa11.25□□□□□ -0.61
TMEM39A-203ENST00000461654 GPX1P07203 203 aa11.25□□□□□ -0.61
TMEM39A-203ENST00000461654 HLA-DRB4P13762 266 aa11.25□□□□□ -0.61
TMEM39A-203ENST00000461654 S100PP25815 95 aa11.25□□□□□ -0.61
TMEM39A-203ENST00000461654 ODF3L2Q3SX64 289 aa11.25□□□□□ -0.61
TMEM39A-203ENST00000461654 GDF5OSQ5U4N7 250 aa11.25□□□□□ -0.61
TMEM39A-203ENST00000461654 RNASE7Q9H1E1 156 aaKnown RBP11.25□□□□□ -0.61
TMEM39A-203ENST00000461654 HLA-DRB4X5D2U9 266 aa11.25□□□□□ -0.61
TMEM39A-203ENST00000461654 FABP5P3A8MUU1 101 aa11.24□□□□□ -0.61
TMEM39A-203ENST00000461654 CRISP2P16562 243 aa11.24□□□□□ -0.61
TMEM39A-203ENST00000461654 KCNIP4Q6PIL6 250 aa11.24□□□□□ -0.61
TMEM39A-203ENST00000461654 APRG1Q8IVJ8 170 aa11.24□□□□□ -0.61
TMEM39A-203ENST00000461654 STHQ8IWL8 128 aa11.24□□□□□ -0.61
TMEM39A-203ENST00000461654 NUDT10Q8NFP7 164 aa11.24□□□□□ -0.61
TMEM39A-203ENST00000461654 NUDT11Q96G61 164 aa11.24□□□□□ -0.61
TMEM39A-203ENST00000461654 H3BMM0 161 aa11.23□□□□□ -0.61
TMEM39A-203ENST00000461654 BTN1A1Q13410 526 aa11.23□□□□□ -0.61
TMEM39A-203ENST00000461654 FAM19A4Q96LR4 140 aa11.23□□□□□ -0.61
TMEM39A-203ENST00000461654 RPP21Q9H633 154 aaKnown RBP11.23□□□□□ -0.61
TMEM39A-203ENST00000461654 XKRY2A2RUG3 117 aa11.22□□□□□ -0.61
TMEM39A-203ENST00000461654 C19orf71A6NCJ1 209 aa11.22□□□□□ -0.61
TMEM39A-203ENST00000461654 J3KRW8 73 aa11.22□□□□□ -0.61
TMEM39A-203ENST00000461654 SH2D1AO60880 128 aa11.22□□□□□ -0.61
TMEM39A-203ENST00000461654 PFN1P07737 140 aaKnown RBP11.22□□□□□ -0.61
TMEM39A-203ENST00000461654 CD7P09564 240 aa11.22□□□□□ -0.61
TMEM39A-203ENST00000461654 NHLRC4P0CG21 123 aaPredicted RBP11.22□□□□□ -0.61
TMEM39A-203ENST00000461654 RNASE4P34096 147 aaKnown RBP11.22□□□□□ -0.61
TMEM39A-203ENST00000461654 TMEM88Q6PEY1 159 aa11.22□□□□□ -0.61
TMEM39A-203ENST00000461654 CLUHP3Q96NS8 147 aa11.22□□□□□ -0.61
TMEM39A-203ENST00000461654 IMMP2LQ96T52 175 aa11.22□□□□□ -0.61
TMEM39A-203ENST00000461654 TUBA4BQ9H853 241 aa11.22□□□□□ -0.61
TMEM39A-203ENST00000461654 TRAV21A0A0B4J279 112 aa11.21□□□□□ -0.61
TMEM39A-203ENST00000461654 TMEM189A5PLL7 270 aa11.21□□□□□ -0.61
TMEM39A-203ENST00000461654 A8MWL6 223 aa11.21□□□□□ -0.61
TMEM39A-203ENST00000461654 CDKN1BP46527 198 aa11.21□□□□□ -0.61
TMEM39A-203ENST00000461654 RPS20P60866 119 aaKnown RBP11.21□□□□□ -0.61
TMEM39A-203ENST00000461654 NUTF2P61970 127 aaKnown RBP11.21□□□□□ -0.61
TMEM39A-203ENST00000461654 ZNF124Q15973 351 aa11.21□□□□□ -0.61
TMEM39A-203ENST00000461654 CT83Q5H943 113 aa11.21□□□□□ -0.61
TMEM39A-203ENST00000461654 LINC00322Q6ZN03 302 aaPredicted RBP11.21□□□□□ -0.61
TMEM39A-203ENST00000461654 CBLN2Q8IUK8 224 aa11.21□□□□□ -0.61
TMEM39A-203ENST00000461654 ZFAND2AQ8N6M9 145 aa11.21□□□□□ -0.61
TMEM39A-203ENST00000461654 OR2D3Q8NGH3 330 aa11.21□□□□□ -0.61
TMEM39A-203ENST00000461654 IL36BQ9NZH7 164 aa11.21□□□□□ -0.61
TMEM39A-203ENST00000461654 V9GYV3 84 aa11.21□□□□□ -0.61
TMEM39A-203ENST00000461654 AMBPP02760 352 aa11.2□□□□□ -0.62
TMEM39A-203ENST00000461654 ORM1P02763 201 aa11.2□□□□□ -0.62
TMEM39A-203ENST00000461654 CRIP1P50238 77 aa11.2□□□□□ -0.62
TMEM39A-203ENST00000461654 ZNF80P51504 273 aaPredicted RBP11.2□□□□□ -0.62
TMEM39A-203ENST00000461654 C7orf71A4D174 169 aa11.19□□□□□ -0.62
TMEM39A-203ENST00000461654 A8MTW9 85 aa11.19□□□□□ -0.62
TMEM39A-203ENST00000461654 KLLNB2CW77 178 aa11.19□□□□□ -0.62
TMEM39A-203ENST00000461654 RPL19P84098 196 aaKnown RBP11.19□□□□□ -0.62
TMEM39A-203ENST00000461654 SPINK13Q1W4C9 94 aa11.19□□□□□ -0.62
TMEM39A-203ENST00000461654 AMTNQ6UX39 209 aa11.19□□□□□ -0.62
TMEM39A-203ENST00000461654 BTF3L4Q96K17 158 aa11.19□□□□□ -0.62
TMEM39A-203ENST00000461654 M0R2Z0 102 aa11.18□□□□□ -0.62
TMEM39A-203ENST00000461654 Q6AWC8 147 aa11.18□□□□□ -0.62
TMEM39A-203ENST00000461654 TRPT1Q86TN4 253 aaKnown RBP11.18□□□□□ -0.62
TMEM39A-203ENST00000461654 TSKUQ8WUA8 353 aa11.18□□□□□ -0.62
TMEM39A-203ENST00000461654 URGCP-MRPS24S4R325 110 aa11.18□□□□□ -0.62
TMEM39A-203ENST00000461654 TRAV12-3A0A0B4J271 114 aa11.17□□□□□ -0.62
TMEM39A-203ENST00000461654 PRR9Q5T870 116 aa11.17□□□□□ -0.62
TMEM39A-203ENST00000461654 GFRA4Q9GZZ7 299 aa11.17□□□□□ -0.62
TMEM39A-203ENST00000461654 C19orf73Q9NVV2 129 aa11.17□□□□□ -0.62
TMEM39A-203ENST00000461654 NAGKQ9UJ70 344 aa11.17□□□□□ -0.62
TMEM39A-203ENST00000461654 TRAV12-2A0A075B6T6 113 aa11.16□□□□□ -0.62
TMEM39A-203ENST00000461654 TRAV9-1A0A075B6T8 112 aa11.16□□□□□ -0.62
TMEM39A-203ENST00000461654 TMSB15BA0A087X1C1 80 aa11.16□□□□□ -0.62
TMEM39A-203ENST00000461654 SMIM27A0A1W2PRY6 76 aa11.16□□□□□ -0.62
TMEM39A-203ENST00000461654 FAM231BA6NCW3 169 aa11.16□□□□□ -0.62
TMEM39A-203ENST00000461654 CA1P00915 261 aaPredicted RBP11.16□□□□□ -0.62
TMEM39A-203ENST00000461654 TCL1AP56279 114 aa11.16□□□□□ -0.62
TMEM39A-203ENST00000461654 FXYD7P58549 80 aa11.16□□□□□ -0.62
TMEM39A-203ENST00000461654 LINC01559Q495D7 138 aa11.16□□□□□ -0.62
TMEM39A-203ENST00000461654 GFI1BQ5VTD9 330 aa11.16□□□□□ -0.62
TMEM39A-203ENST00000461654 MORN3Q6PF18 240 aaPredicted RBP11.16□□□□□ -0.62
TMEM39A-203ENST00000461654 FAM159AQ6UWV7 190 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms