RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 MANBALQ9NQG1 85 aa9.06□□□□□ -0.96
HDAC4-207ENST00000461113 IGHV4-28A0A0C4DH34 117 aa9.05□□□□□ -0.96
HDAC4-207ENST00000461113 C7orf71A4D174 169 aa9.05□□□□□ -0.96
HDAC4-207ENST00000461113 GGTLC3B5MD39 225 aa9.05□□□□□ -0.96
HDAC4-207ENST00000461113 PAGE4O60829 102 aa9.05□□□□□ -0.96
HDAC4-207ENST00000461113 HTN1P15515 57 aa9.05□□□□□ -0.96
HDAC4-207ENST00000461113 CRISP2P16562 243 aa9.05□□□□□ -0.96
HDAC4-207ENST00000461113 TAS2R60P59551 318 aa9.05□□□□□ -0.96
HDAC4-207ENST00000461113 GNG5P63218 68 aa9.05□□□□□ -0.96
HDAC4-207ENST00000461113 LGALS9CQ6DKI2 356 aa9.05□□□□□ -0.96
HDAC4-207ENST00000461113 ALKAL2Q6UX46 152 aa9.05□□□□□ -0.96
HDAC4-207ENST00000461113 GNG13Q9P2W3 67 aa9.05□□□□□ -0.96
HDAC4-207ENST00000461113 YTHDF2Q9Y5A9 579 aaKnown RBP9.05□□□□□ -0.96
HDAC4-207ENST00000461113 TRAV12-3A0A0B4J271 114 aa9.04□□□□□ -0.96
HDAC4-207ENST00000461113 TEX48A0A1B0GUV7 120 aa9.04□□□□□ -0.96
HDAC4-207ENST00000461113 PEX7O00628 323 aa9.04□□□□□ -0.96
HDAC4-207ENST00000461113 CRXO43186 299 aaPredicted RBP9.04□□□□□ -0.96
HDAC4-207ENST00000461113 TAGLN2P37802 199 aaKnown RBP9.04□□□□□ -0.96
HDAC4-207ENST00000461113 UBE2G1P62253 170 aa9.04□□□□□ -0.96
HDAC4-207ENST00000461113 SAPCD1Q5SSQ6 148 aa9.04□□□□□ -0.96
HDAC4-207ENST00000461113 GFI1BQ5VTD9 330 aa9.04□□□□□ -0.96
HDAC4-207ENST00000461113 C1orf158Q8N1D5 194 aa9.04□□□□□ -0.96
HDAC4-207ENST00000461113 TMEM75Q8N9X5 138 aa9.04□□□□□ -0.96
HDAC4-207ENST00000461113 Q8TAT8 98 aa9.04□□□□□ -0.96
HDAC4-207ENST00000461113 C11orf45Q8TAV5 145 aa9.04□□□□□ -0.96
HDAC4-207ENST00000461113 TXNDC17Q9BRA2 123 aa9.04□□□□□ -0.96
HDAC4-207ENST00000461113 PYGO2Q9BRQ0 406 aa9.04□□□□□ -0.96
HDAC4-207ENST00000461113 TREM1Q9NP99 234 aa9.04□□□□□ -0.96
HDAC4-207ENST00000461113 X6R8D5 127 aa9.04□□□□□ -0.96
HDAC4-207ENST00000461113 LOC102723971A0A1B0GUV8 181 aa9.03□□□□□ -0.96
HDAC4-207ENST00000461113 KLLNB2CW77 178 aa9.03□□□□□ -0.96
HDAC4-207ENST00000461113 RGS13O14921 159 aa9.03□□□□□ -0.96
HDAC4-207ENST00000461113 DEFB4AO15263 64 aa9.03□□□□□ -0.96
HDAC4-207ENST00000461113 S100A9P06702 114 aaKnown RBP9.03□□□□□ -0.96
HDAC4-207ENST00000461113 AKR1C3P42330 323 aa9.03□□□□□ -0.96
HDAC4-207ENST00000461113 EMP1P54849 157 aa9.03□□□□□ -0.96
HDAC4-207ENST00000461113 FLI1Q01543 452 aaPredicted RBP9.03□□□□□ -0.96
HDAC4-207ENST00000461113 ZNF493Q6ZR52 646 aa9.03□□□□□ -0.96
HDAC4-207ENST00000461113 PRNTQ86SH4 94 aa9.03□□□□□ -0.96
HDAC4-207ENST00000461113 Q8NAQ8 132 aa9.03□□□□□ -0.96
HDAC4-207ENST00000461113 FAM19A4Q96LR4 140 aa9.03□□□□□ -0.96
HDAC4-207ENST00000461113 PSG8Q9UQ74 426 aa9.03□□□□□ -0.96
HDAC4-207ENST00000461113 KLK5Q9Y337 293 aaPredicted RBP9.03□□□□□ -0.96
HDAC4-207ENST00000461113 ZNF705GA8MUZ8 300 aaPredicted RBP9.02□□□□□ -0.97
HDAC4-207ENST00000461113 C11orf94C9JXX5 98 aa9.02□□□□□ -0.97
HDAC4-207ENST00000461113 SPART-AS1P0CW21 52 aa9.02□□□□□ -0.97
HDAC4-207ENST00000461113 C16orf74Q96GX8 76 aa9.02□□□□□ -0.97
HDAC4-207ENST00000461113 FMC1Q96HJ9 113 aa9.02□□□□□ -0.97
HDAC4-207ENST00000461113 PKHD1P08F94 4074 aa9.02□□□□□ -0.97
HDAC4-207ENST00000461113 VPS13DQ5THJ4 4388 aa9.01□□□□□ -0.97
HDAC4-207ENST00000461113 TRAV8-1A0A0A6YYK1 113 aa9.01□□□□□ -0.97
HDAC4-207ENST00000461113 TRAV21A0A0B4J279 112 aa9.01□□□□□ -0.97
HDAC4-207ENST00000461113 CBY3A6NI87 242 aa9.01□□□□□ -0.97
HDAC4-207ENST00000461113 RBMY1A1P0DJD3 496 aaKnown RBP9.01□□□□□ -0.97
HDAC4-207ENST00000461113 RBMY1CP0DJD4 496 aa9.01□□□□□ -0.97
HDAC4-207ENST00000461113 BTN1A1Q13410 526 aa9.01□□□□□ -0.97
HDAC4-207ENST00000461113 RBMY1FQ15415 496 aaKnown RBP9.01□□□□□ -0.97
HDAC4-207ENST00000461113 SMUG1Q53HV7 270 aa9.01□□□□□ -0.97
HDAC4-207ENST00000461113 ZFAND2AQ8N6M9 145 aa9.01□□□□□ -0.97
HDAC4-207ENST00000461113 SGK494Q96LW2 274 aa9.01□□□□□ -0.97
HDAC4-207ENST00000461113 HERC1Q15751 4861 aa9□□□□□ -0.97
HDAC4-207ENST00000461113 SNURFLB1AK76 121 aa9□□□□□ -0.97
HDAC4-207ENST00000461113 ATP5G3P48201 142 aa9□□□□□ -0.97
HDAC4-207ENST00000461113 KIR3DS1Q14943 382 aa9□□□□□ -0.97
HDAC4-207ENST00000461113 FAM159AQ6UWV7 190 aa9□□□□□ -0.97
HDAC4-207ENST00000461113 EIF4E3Q8N5X7 224 aaKnown RBP9□□□□□ -0.97
HDAC4-207ENST00000461113 ZNF680Q8NEM1 530 aa9□□□□□ -0.97
HDAC4-207ENST00000461113 ZFP30Q9Y2G7 519 aa9□□□□□ -0.97
HDAC4-207ENST00000461113 IGHV1OR15-1A0A075B7D0 117 aa8.99□□□□□ -0.97
HDAC4-207ENST00000461113 TRAV34A0A0B4J273 112 aa8.99□□□□□ -0.97
HDAC4-207ENST00000461113 A0A1B0GVY2 172 aa8.99□□□□□ -0.97
HDAC4-207ENST00000461113 PDE6DO43924 150 aa8.99□□□□□ -0.97
HDAC4-207ENST00000461113 CCL20P78556 96 aa8.99□□□□□ -0.97
HDAC4-207ENST00000461113 TMEM263Q8WUH6 116 aaKnown RBP8.99□□□□□ -0.97
HDAC4-207ENST00000461113 VAX2Q9UIW0 290 aa8.99□□□□□ -0.97
HDAC4-207ENST00000461113 TIMM8BQ9Y5J9 83 aaPredicted RBP8.99□□□□□ -0.97
HDAC4-207ENST00000461113 LYRM9A8MSI8 78 aa8.98□□□□□ -0.97
HDAC4-207ENST00000461113 ZNF324O75467 553 aaPredicted RBP8.98□□□□□ -0.97
HDAC4-207ENST00000461113 BCL2P10415 239 aa8.98□□□□□ -0.97
HDAC4-207ENST00000461113 MEF2BQ02080 365 aaPredicted RBP8.98□□□□□ -0.97
HDAC4-207ENST00000461113 TMEM183BQ1AE95 376 aa8.98□□□□□ -0.97
HDAC4-207ENST00000461113 Q6AWC8 147 aa8.98□□□□□ -0.97
HDAC4-207ENST00000461113 TEX261Q6UWH6 196 aa8.98□□□□□ -0.97
HDAC4-207ENST00000461113 KCNS1Q96KK3 526 aa8.98□□□□□ -0.97
HDAC4-207ENST00000461113 LINC00467Q9BRT7 94 aa8.98□□□□□ -0.97
HDAC4-207ENST00000461113 NAGKQ9UJ70 344 aa8.98□□□□□ -0.97
HDAC4-207ENST00000461113 TRGV11A0A075B6L2 103 aa8.97□□□□□ -0.97
HDAC4-207ENST00000461113 TRBV6-1A0A0K0K1D8 114 aa8.97□□□□□ -0.97
HDAC4-207ENST00000461113 SCO2A0A1W2PP80 73 aa8.97□□□□□ -0.97
HDAC4-207ENST00000461113 GCGP01275 180 aa8.97□□□□□ -0.97
HDAC4-207ENST00000461113 NANOS2P60321 138 aaKnown RBP8.97□□□□□ -0.97
HDAC4-207ENST00000461113 RAB14P61106 215 aa8.97□□□□□ -0.97
HDAC4-207ENST00000461113 DAD1P61803 113 aa8.97□□□□□ -0.97
HDAC4-207ENST00000461113 ANXA2RQ3ZCQ2 193 aa8.97□□□□□ -0.97
HDAC4-207ENST00000461113 FAM222AQ5U5X8 452 aa8.97□□□□□ -0.97
HDAC4-207ENST00000461113 Q86TA4 180 aa8.97□□□□□ -0.97
HDAC4-207ENST00000461113 LINC00479Q96M42 142 aa8.97□□□□□ -0.97
HDAC4-207ENST00000461113 KLF12Q9Y4X4 402 aa8.97□□□□□ -0.97
HDAC4-207ENST00000461113 DYNC1H1Q14204 4646 aaKnown RBP8.96□□□□□ -0.97
HDAC4-207ENST00000461113 MUC4Q99102 2169 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms