RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 TRGV2A0A075B6R0 118 aa13.16□□□□□ -0.3
COL5A1-203ENST00000460264 H3BNG1 76 aa13.16□□□□□ -0.3
COL5A1-203ENST00000460264 SPINK4O60575 86 aa13.16□□□□□ -0.3
COL5A1-203ENST00000460264 HSD17B11Q8NBQ5 300 aa13.16□□□□□ -0.3
COL5A1-203ENST00000460264 OR2G3Q8NGZ4 309 aa13.16□□□□□ -0.3
COL5A1-203ENST00000460264 HYLS1Q96M11 299 aa13.16□□□□□ -0.3
COL5A1-203ENST00000460264 LENEPQ9Y5L5 61 aa13.16□□□□□ -0.3
COL5A1-203ENST00000460264 HMGB3O15347 200 aaKnown RBP13.15□□□□□ -0.3
COL5A1-203ENST00000460264 GIPP09681 153 aaPredicted RBP13.15□□□□□ -0.3
COL5A1-203ENST00000460264 Q5BKY6 102 aa13.15□□□□□ -0.3
COL5A1-203ENST00000460264 SOHLH1Q5JUK2 328 aa13.15□□□□□ -0.3
COL5A1-203ENST00000460264 C1orf134Q5TEV5 83 aa13.15□□□□□ -0.3
COL5A1-203ENST00000460264 SSX7Q7RTT5 188 aa13.15□□□□□ -0.3
COL5A1-203ENST00000460264 ARPC5LQ9BPX5 153 aa13.15□□□□□ -0.3
COL5A1-203ENST00000460264 PKHD1P08F94 4074 aa13.14□□□□□ -0.31
COL5A1-203ENST00000460264 NBDYA0A0U1RRE5 68 aa13.14□□□□□ -0.31
COL5A1-203ENST00000460264 PGPA6NDG6 321 aa13.14□□□□□ -0.31
COL5A1-203ENST00000460264 ARL14EPLP0DKL9 152 aa13.14□□□□□ -0.31
COL5A1-203ENST00000460264 FAM74A1Q5RGS3 127 aa13.14□□□□□ -0.31
COL5A1-203ENST00000460264 CMTM2Q8TAZ6 248 aa13.14□□□□□ -0.31
COL5A1-203ENST00000460264 TMED6Q8WW62 240 aa13.14□□□□□ -0.31
COL5A1-203ENST00000460264 ASB13Q8WXK3 278 aa13.14□□□□□ -0.31
COL5A1-203ENST00000460264 PSMG3Q9BT73 122 aaPredicted RBP13.14□□□□□ -0.31
COL5A1-203ENST00000460264 RPH3ALQ9UNE2 315 aa13.14□□□□□ -0.31
COL5A1-203ENST00000460264 ATP6V0CP27449 155 aa13.13□□□□□ -0.31
COL5A1-203ENST00000460264 CDC34P49427 236 aaPredicted RBP13.13□□□□□ -0.31
COL5A1-203ENST00000460264 ZNF415Q09FC8 603 aa13.13□□□□□ -0.31
COL5A1-203ENST00000460264 MUC21Q5SSG8 566 aa13.13□□□□□ -0.31
COL5A1-203ENST00000460264 Q6AWC8 147 aa13.13□□□□□ -0.31
COL5A1-203ENST00000460264 MRPL16Q9NX20 251 aaKnown RBP13.13□□□□□ -0.31
COL5A1-203ENST00000460264 GOLT1AQ6ZVE7 132 aa13.12□□□□□ -0.31
COL5A1-203ENST00000460264 ARL6IP6Q8N6S5 226 aa13.12□□□□□ -0.31
COL5A1-203ENST00000460264 VSIG2Q96IQ7 327 aa13.12□□□□□ -0.31
COL5A1-203ENST00000460264 PKD1P98161 4303 aa13.12□□□□□ -0.31
COL5A1-203ENST00000460264 STAG3L2P0CL84 134 aa13.11□□□□□ -0.31
COL5A1-203ENST00000460264 STAG3L3P0CL85 134 aa13.11□□□□□ -0.31
COL5A1-203ENST00000460264 ST6GAL2Q96JF0 529 aa13.11□□□□□ -0.31
COL5A1-203ENST00000460264 SH3BGRL3Q9H299 93 aa13.11□□□□□ -0.31
COL5A1-203ENST00000460264 RNF222A6NCQ9 220 aa13.1□□□□□ -0.31
COL5A1-203ENST00000460264 GNG5P63218 68 aa13.1□□□□□ -0.31
COL5A1-203ENST00000460264 SERF2P84101 59 aa13.1□□□□□ -0.31
COL5A1-203ENST00000460264 ESRGQ1W209 222 aa13.1□□□□□ -0.31
COL5A1-203ENST00000460264 RAB24Q969Q5 203 aa13.1□□□□□ -0.31
COL5A1-203ENST00000460264 MDFICQ9P1T7 246 aa13.1□□□□□ -0.31
COL5A1-203ENST00000460264 HERC2O95714 4834 aa13.09□□□□□ -0.31
COL5A1-203ENST00000460264 A0A096LPF7 62 aa13.09□□□□□ -0.31
COL5A1-203ENST00000460264 TRAV8-1A0A0A6YYK1 113 aa13.09□□□□□ -0.31
COL5A1-203ENST00000460264 MBP02144 154 aa13.09□□□□□ -0.31
COL5A1-203ENST00000460264 GCHFRP30047 84 aa13.09□□□□□ -0.31
COL5A1-203ENST00000460264 TMEM183BQ1AE95 376 aa13.09□□□□□ -0.31
COL5A1-203ENST00000460264 FAM159AQ6UWV7 190 aa13.09□□□□□ -0.31
COL5A1-203ENST00000460264 TMEM183AQ8IXX5 376 aa13.09□□□□□ -0.31
COL5A1-203ENST00000460264 INO80EQ8NBZ0 244 aaPredicted RBP13.09□□□□□ -0.31
COL5A1-203ENST00000460264 SUN5Q8TC36 379 aa13.09□□□□□ -0.31
COL5A1-203ENST00000460264 UPK3BQ9BT76 320 aa13.09□□□□□ -0.31
COL5A1-203ENST00000460264 MRPS16Q9Y3D3 137 aaKnown RBP13.09□□□□□ -0.31
COL5A1-203ENST00000460264 TRGV11A0A075B6L2 103 aa13.08□□□□□ -0.32
COL5A1-203ENST00000460264 FXYD6-FXYD2A0A087WZ82 144 aa13.08□□□□□ -0.32
COL5A1-203ENST00000460264 IGHV3-53P01767 116 aa13.08□□□□□ -0.32
COL5A1-203ENST00000460264 C6orf223Q8N319 242 aa13.08□□□□□ -0.32
COL5A1-203ENST00000460264 TVP23CQ96ET8 276 aa13.08□□□□□ -0.32
COL5A1-203ENST00000460264 Q9H8V8 135 aa13.08□□□□□ -0.32
COL5A1-203ENST00000460264 NAGKQ9UJ70 344 aa13.08□□□□□ -0.32
COL5A1-203ENST00000460264 TNFSF18Q9UNG2 199 aa13.08□□□□□ -0.32
COL5A1-203ENST00000460264 KIAA1109Q2LD37 5005 aa13.08□□□□□ -0.32
COL5A1-203ENST00000460264 F6UZH7 168 aa13.07□□□□□ -0.32
COL5A1-203ENST00000460264 RGS21Q2M5E4 152 aa13.07□□□□□ -0.32
COL5A1-203ENST00000460264 TDRG1Q3Y452 100 aa13.07□□□□□ -0.32
COL5A1-203ENST00000460264 RPL7L1Q6DKI1 246 aaKnown RBP13.07□□□□□ -0.32
COL5A1-203ENST00000460264 C5orf17Q8NAS9 161 aa13.07□□□□□ -0.32
COL5A1-203ENST00000460264 OR2T35Q8NGX2 323 aa13.07□□□□□ -0.32
COL5A1-203ENST00000460264 TREM1Q9NP99 234 aa13.07□□□□□ -0.32
COL5A1-203ENST00000460264 KRTAP1-5Q9BYS1 174 aa13.06□□□□□ -0.32
COL5A1-203ENST00000460264 ACTR3CQ9C0K3 210 aaPredicted RBP13.06□□□□□ -0.32
COL5A1-203ENST00000460264 BORCS7-ASMTA0A0B4J1R7 106 aa13.05□□□□□ -0.32
COL5A1-203ENST00000460264 TRAV21A0A0B4J279 112 aa13.05□□□□□ -0.32
COL5A1-203ENST00000460264 SERTM2A0A1B0GWG4 89 aa13.05□□□□□ -0.32
COL5A1-203ENST00000460264 GGTLC3B5MD39 225 aa13.05□□□□□ -0.32
COL5A1-203ENST00000460264 G3V3Q6 166 aa13.05□□□□□ -0.32
COL5A1-203ENST00000460264 PAX4O43316 350 aa13.05□□□□□ -0.32
COL5A1-203ENST00000460264 CXorf1O96002 111 aa13.05□□□□□ -0.32
COL5A1-203ENST00000460264 TCRAP04437 139 aa13.05□□□□□ -0.32
COL5A1-203ENST00000460264 FHL2Q14192 279 aa13.05□□□□□ -0.32
COL5A1-203ENST00000460264 TTC32Q5I0X7 151 aa13.05□□□□□ -0.32
COL5A1-203ENST00000460264 SGK494Q96LW2 274 aa13.05□□□□□ -0.32
COL5A1-203ENST00000460264 SPXQ9BT56 116 aa13.05□□□□□ -0.32
COL5A1-203ENST00000460264 PRO0255Q9UI72 69 aa13.05□□□□□ -0.32
COL5A1-203ENST00000460264 ICOSQ9Y6W8 199 aa13.05□□□□□ -0.32
COL5A1-203ENST00000460264 CRYBA4P53673 196 aa13.04□□□□□ -0.32
COL5A1-203ENST00000460264 TNP2Q05952 138 aa13.04□□□□□ -0.32
COL5A1-203ENST00000460264 RASL10AQ92737 203 aa13.04□□□□□ -0.32
COL5A1-203ENST00000460264 C8orf49Q96NF6 230 aa13.04□□□□□ -0.32
COL5A1-203ENST00000460264 TMEM167BQ9NRX6 74 aa13.04□□□□□ -0.32
COL5A1-203ENST00000460264 HHLA3Q9XRX5 114 aa13.04□□□□□ -0.32
COL5A1-203ENST00000460264 IGHV3-16A0A0C4DH30 117 aa13.03□□□□□ -0.32
COL5A1-203ENST00000460264 SLAQ13239 276 aa13.03□□□□□ -0.32
COL5A1-203ENST00000460264 NDFIP1Q9BT67 221 aa13.03□□□□□ -0.32
COL5A1-203ENST00000460264 K7EQM0 130 aa13.02□□□□□ -0.33
COL5A1-203ENST00000460264 GNRH2O43555 120 aa13.02□□□□□ -0.33
COL5A1-203ENST00000460264 IGLV2-11P01706 119 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms