RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 IGHV1OR15-1A0A075B7D0 117 aa16.41■□□□□ 0.22
CBX3-204ENST00000456948 KANTRA0A1W2PQU2 76 aa16.41■□□□□ 0.22
CBX3-204ENST00000456948 DAZ2Q13117 558 aaKnown RBP16.41■□□□□ 0.22
CBX3-204ENST00000456948 NDFIP1Q9BT67 221 aa16.41■□□□□ 0.22
CBX3-204ENST00000456948 SUMO1P63165 101 aaKnown RBP16.39■□□□□ 0.21
CBX3-204ENST00000456948 IBA57Q5T440 356 aaKnown RBP16.39■□□□□ 0.21
CBX3-204ENST00000456948 TMEM88Q6PEY1 159 aa16.39■□□□□ 0.21
CBX3-204ENST00000456948 STOML3Q8TAV4 291 aa16.39■□□□□ 0.21
CBX3-204ENST00000456948 NKX6-2Q9C056 277 aaPredicted RBP16.39■□□□□ 0.21
CBX3-204ENST00000456948 CYTL1Q9NRR1 136 aa16.39■□□□□ 0.21
CBX3-204ENST00000456948 A0A1W2PRE2 83 aa16.38■□□□□ 0.21
CBX3-204ENST00000456948 FBLL1A6NHQ2 334 aaKnown RBP16.38■□□□□ 0.21
CBX3-204ENST00000456948 FAM159AQ6UWV7 190 aa16.38■□□□□ 0.21
CBX3-204ENST00000456948 UBE2DNLQ8IWF7 75 aa16.38■□□□□ 0.21
CBX3-204ENST00000456948 GSN-AS1Q9NRJ2 163 aa16.38■□□□□ 0.21
CBX3-204ENST00000456948 GAGE12BA1L429 117 aa16.37■□□□□ 0.21
CBX3-204ENST00000456948 PFDN1O60925 122 aa16.37■□□□□ 0.21
CBX3-204ENST00000456948 GAGE7O76087 117 aa16.37■□□□□ 0.21
CBX3-204ENST00000456948 GAGE12FP0CL80 117 aa16.37■□□□□ 0.21
CBX3-204ENST00000456948 GAGE12GP0CL81 117 aa16.37■□□□□ 0.21
CBX3-204ENST00000456948 GAGE12IP0CL82 117 aa16.37■□□□□ 0.21
CBX3-204ENST00000456948 POM121L12Q8N7R1 296 aa16.37■□□□□ 0.21
CBX3-204ENST00000456948 ZNF471Q9BX82 626 aaPredicted RBP16.37■□□□□ 0.21
CBX3-204ENST00000456948 TREM1Q9NP99 234 aa16.37■□□□□ 0.21
CBX3-204ENST00000456948 TRGV2A0A075B6R0 118 aa16.36■□□□□ 0.21
CBX3-204ENST00000456948 UMAD1C9J7I0 102 aa16.36■□□□□ 0.21
CBX3-204ENST00000456948 TCRAP04437 139 aa16.36■□□□□ 0.21
CBX3-204ENST00000456948 PRR9Q5T870 116 aa16.36■□□□□ 0.21
CBX3-204ENST00000456948 Q6AWC8 147 aa16.36■□□□□ 0.21
CBX3-204ENST00000456948 LINC00612Q8N6U2 182 aa16.36■□□□□ 0.21
CBX3-204ENST00000456948 EPDR1Q9UM22 224 aa16.36■□□□□ 0.21
CBX3-204ENST00000456948 EPPK1P58107 5090 aaKnown RBP16.35■□□□□ 0.21
CBX3-204ENST00000456948 TRAV21A0A0B4J279 112 aa16.35■□□□□ 0.21
CBX3-204ENST00000456948 IFNA7P01567 189 aa16.35■□□□□ 0.21
CBX3-204ENST00000456948 SEC11BP0C7V7 166 aa16.35■□□□□ 0.21
CBX3-204ENST00000456948 TCL1AP56279 114 aa16.35■□□□□ 0.21
CBX3-204ENST00000456948 GNG5P63218 68 aa16.35■□□□□ 0.21
CBX3-204ENST00000456948 ZNF415Q09FC8 603 aa16.35■□□□□ 0.21
CBX3-204ENST00000456948 TRGV11A0A075B6L2 103 aa16.34■□□□□ 0.21
CBX3-204ENST00000456948 BCL2L11O43521 198 aa16.34■□□□□ 0.21
CBX3-204ENST00000456948 PPT1P50897 306 aa16.34■□□□□ 0.21
CBX3-204ENST00000456948 OR5I1Q13606 314 aa16.34■□□□□ 0.21
CBX3-204ENST00000456948 CYB561D1Q8N8Q1 229 aa16.34■□□□□ 0.21
CBX3-204ENST00000456948 C11orf72Q8NBR9 251 aa16.34■□□□□ 0.21
CBX3-204ENST00000456948 OR11H4Q8NGC9 324 aa16.34■□□□□ 0.21
CBX3-204ENST00000456948 TRGV1A0A0A0MS02 117 aa16.33■□□□□ 0.2
CBX3-204ENST00000456948 MAP1LC3B2A6NCE7 125 aa16.33■□□□□ 0.2
CBX3-204ENST00000456948 ZNF726P1Q15940 193 aa16.33■□□□□ 0.2
CBX3-204ENST00000456948 LGALS9BQ3B8N2 356 aa16.33■□□□□ 0.2
CBX3-204ENST00000456948 RNF212Q495C1 297 aa16.33■□□□□ 0.2
CBX3-204ENST00000456948 ZFP69Q49AA0 526 aa16.33■□□□□ 0.2
CBX3-204ENST00000456948 SSX7Q7RTT5 188 aa16.33■□□□□ 0.2
CBX3-204ENST00000456948 ATG101Q9BSB4 218 aa16.33■□□□□ 0.2
CBX3-204ENST00000456948 MAP1LC3BQ9GZQ8 125 aa16.33■□□□□ 0.2
CBX3-204ENST00000456948 TRAV8-1A0A0A6YYK1 113 aa16.32■□□□□ 0.2
CBX3-204ENST00000456948 MUC21Q5SSG8 566 aa16.32■□□□□ 0.2
CBX3-204ENST00000456948 SAPCD1Q5SSQ6 148 aa16.32■□□□□ 0.2
CBX3-204ENST00000456948 Q6ZTI0 123 aa16.32■□□□□ 0.2
CBX3-204ENST00000456948 NAGKQ9UJ70 344 aa16.32■□□□□ 0.2
CBX3-204ENST00000456948 GGTLC3B5MD39 225 aa16.31■□□□□ 0.2
CBX3-204ENST00000456948 NUDT3O95989 172 aa16.31■□□□□ 0.2
CBX3-204ENST00000456948 TPT1P13693 172 aaKnown RBP16.31■□□□□ 0.2
CBX3-204ENST00000456948 FGF8P55075 233 aaPredicted RBP16.31■□□□□ 0.2
CBX3-204ENST00000456948 FLI1Q01543 452 aaPredicted RBP16.31■□□□□ 0.2
CBX3-204ENST00000456948 TMUB2Q71RG4 321 aa16.31■□□□□ 0.2
CBX3-204ENST00000456948 KCNS1Q96KK3 526 aa16.31■□□□□ 0.2
CBX3-204ENST00000456948 C18orf15Q96N68 181 aa16.31■□□□□ 0.2
CBX3-204ENST00000456948 PSG8Q9UQ74 426 aa16.31■□□□□ 0.2
CBX3-204ENST00000456948 KLF12Q9Y4X4 402 aa16.31■□□□□ 0.2
CBX3-204ENST00000456948 F6UZH7 168 aa16.3■□□□□ 0.2
CBX3-204ENST00000456948 SPINK4O60575 86 aa16.3■□□□□ 0.2
CBX3-204ENST00000456948 UBE2G2P60604 165 aa16.3■□□□□ 0.2
CBX3-204ENST00000456948 EIF5AL1Q6IS14 154 aaKnown RBP16.3■□□□□ 0.2
CBX3-204ENST00000456948 DPPA3Q6W0C5 159 aa16.3■□□□□ 0.2
CBX3-204ENST00000456948 TMEM75Q8N9X5 138 aa16.3■□□□□ 0.2
CBX3-204ENST00000456948 HIST1H2BAQ96A08 127 aa16.3■□□□□ 0.2
CBX3-204ENST00000456948 SPXQ9BT56 116 aa16.3■□□□□ 0.2
CBX3-204ENST00000456948 TMPRSS5Q9H3S3 457 aa16.3■□□□□ 0.2
CBX3-204ENST00000456948 TP53TG3Q9ULZ0 132 aa16.3■□□□□ 0.2
CBX3-204ENST00000456948 FAM3BP58499 235 aaPredicted RBP16.29■□□□□ 0.2
CBX3-204ENST00000456948 TDRG1Q3Y452 100 aa16.29■□□□□ 0.2
CBX3-204ENST00000456948 PRNTQ86SH4 94 aa16.29■□□□□ 0.2
CBX3-204ENST00000456948 TCTE3Q8IZS6 198 aa16.29■□□□□ 0.2
CBX3-204ENST00000456948 SGK494Q96LW2 274 aa16.29■□□□□ 0.2
CBX3-204ENST00000456948 TMEM183BQ1AE95 376 aa16.28■□□□□ 0.2
CBX3-204ENST00000456948 SMUG1Q53HV7 270 aa16.28■□□□□ 0.2
CBX3-204ENST00000456948 Q6ZQT7 251 aa16.28■□□□□ 0.2
CBX3-204ENST00000456948 TMEM183AQ8IXX5 376 aa16.28■□□□□ 0.2
CBX3-204ENST00000456948 TCEAL7Q9BRU2 100 aa16.28■□□□□ 0.2
CBX3-204ENST00000456948 SDF2L1Q9HCN8 221 aa16.28■□□□□ 0.2
CBX3-204ENST00000456948 FAM74A7A6NL05 159 aa16.27■□□□□ 0.2
CBX3-204ENST00000456948 CCL18P55774 89 aa16.27■□□□□ 0.2
CBX3-204ENST00000456948 Q6ZNX1 250 aa16.27■□□□□ 0.2
CBX3-204ENST00000456948 FAM213BQ8TBF2 198 aa16.27■□□□□ 0.2
CBX3-204ENST00000456948 SFT2D1Q8WV19 159 aa16.27■□□□□ 0.2
CBX3-204ENST00000456948 KMT2AQ03164 3969 aa16.26■□□□□ 0.19
CBX3-204ENST00000456948 TRAV26-1A0A087WT03 109 aa16.26■□□□□ 0.19
CBX3-204ENST00000456948 H3BNG1 76 aa16.26■□□□□ 0.19
CBX3-204ENST00000456948 SLAQ13239 276 aa16.26■□□□□ 0.19
CBX3-204ENST00000456948 CST9LP1Q5W188 147 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms