RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CSDC2Q9Y534 153 aaKnown RBP3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 INSIG2Q9Y5U4 225 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 RAI1Q7Z5J4 1906 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 DYSFO75923 2080 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 TET2Q6N021 2002 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 TRAV8-2A0A0B4J237 113 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 TRAV8-4A0A0B4J246 113 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 TRBV6-1A0A0K0K1D8 114 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 FAM240AA0A1B0GVK7 77 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 OR2H2O95918 312 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 RBP4P02753 201 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 FCER1GP30273 86 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 ZNF137PP52743 207 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 DSCR4P56555 118 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 HERVK_113P61574 105 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 ESPL1Q14674 2120 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 C12orf74Q32Q52 190 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 SPINK9Q5DT21 86 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 MEIG1Q5JSS6 88 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 GDF5OSQ5U4N7 250 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 ZNF493Q6ZR52 646 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 LINC00173Q6ZV60 143 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 AAED1Q7RTV5 226 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 SH2D6Q7Z4S9 175 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 CD177Q8N6Q3 437 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 OR1L8Q8NGR8 309 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 ZC2HC1AQ96GY0 325 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 SLC25A39Q9BZJ4 359 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 PPDPFQ9H3Y8 114 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 ONECUT1Q9UBC0 465 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 GNG12Q9UBI6 72 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 Q9UF83 564 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 EPDR1Q9UM22 224 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 A0A087WX48 190 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 LOC107984156A0A0G2JMH3 177 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 C5orf49A4QMS7 147 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 C5orf63A6NC05 138 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 C19orf71A6NCJ1 209 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 SMIM9A6NGZ8 99 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 LINC01549A6NIU2 74 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 C17orf98A8MV24 154 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 K7ENP7 123 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 CDX4O14627 284 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 SCRG1O75711 98 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 EMP1P54849 157 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 KRTAP10-12P60413 245 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 HSPE1P61604 102 aaKnown RBP3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 PPP1CAP62136 330 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 ERHP84090 104 aaKnown RBP3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 PRCDQ00LT1 54 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 MYO9BQ13459 2157 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 EIF4EBP1Q13541 118 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 LAGE3Q14657 143 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 C2orf83Q53S99 150 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 C9orf153Q5TBE3 101 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 ALPK2Q86TB3 2170 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 PCP2Q8IVA1 136 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 ARL17AQ8IVW1 177 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 LINC01561Q8N1V8 128 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 TMEM75Q8N9X5 138 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 TMEM158Q8WZ71 300 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 VSIG2Q96IQ7 327 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 DEFB126Q9BYW3 111 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 OTORQ9NRC9 128 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 SPRR3Q9UBC9 169 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 SMAD5-AS1Q9Y6J3 95 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 NOTCH3Q9UM47 2321 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 RP1P56715 2156 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 PRRC2BQ5JSZ5 2229 aaKnown RBP3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 USF3Q68DE3 2245 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 DIDO1Q9BTC0 2240 aaKnown RBP3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 IGLV8-61A0A075B6I0 122 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 TRAV2A0A0B4J234 112 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 MYMXA0A1B0GTQ4 84 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 FAM168BA1KXE4 195 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 PGPA6NDG6 321 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 C12orf77C9JDV5 145 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 D6R8Y8 96 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 H3BMM0 161 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 CCDC179H3BU77 68 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 H3BVH4 76 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 NCR2O95944 276 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 NPYP01303 97 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 TCRAP04437 139 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 LGALS1P09382 135 aaKnown RBP3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 GIG44P09565 113 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 SLC25A16P16260 332 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 IFI27P40305 119 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 PSMB2P49721 201 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 PMVKQ15126 192 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 ATXN8Q156A1 80 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 SCGB1D4Q6XE38 83 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 C10orf126Q8N4M7 172 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 ANKRD29Q8N6D5 301 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 OR4C13Q8NGP0 309 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 CCL4L1Q8NHW4 92 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 UBE2WQ96B02 151 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 KIR2DL4Q99706 377 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 FOXC2Q99958 501 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 IMUPQ9GZP8 106 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms