RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 LINC00477Q96M19 166 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 FANCMQ8IYD8 2048 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 SMIM26A0A096LP01 95 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 PAX4O43316 350 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 HAMPP81172 84 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 RPL18AQ02543 176 aaKnown RBP4.08□□□□□ -1.76
SCN11A-202ENST00000444237 PCOLCEQ15113 449 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 ZNF876PQ49A33 203 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 RNF152Q8N8N0 203 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 PRSS22Q9GZN4 317 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 SRRM5B3KS81 715 aa4.07□□□□□ -1.76
SCN11A-202ENST00000444237 SNRPD3P62318 126 aaKnown RBP4.07□□□□□ -1.76
SCN11A-202ENST00000444237 LY6DQ14210 128 aa4.07□□□□□ -1.76
SCN11A-202ENST00000444237 KHDC1LQ5JSQ8 128 aa4.07□□□□□ -1.76
SCN11A-202ENST00000444237 IMMP1LQ96LU5 166 aa4.07□□□□□ -1.76
SCN11A-202ENST00000444237 CDIP1Q9H305 208 aa4.07□□□□□ -1.76
SCN11A-202ENST00000444237 DAD1P61803 113 aa4.07□□□□□ -1.76
SCN11A-202ENST00000444237 RPS28P62857 69 aaKnown RBP4.07□□□□□ -1.76
SCN11A-202ENST00000444237 TEX36Q5VZQ5 186 aa4.07□□□□□ -1.76
SCN11A-202ENST00000444237 CELA2AP08217 269 aa4.07□□□□□ -1.76
SCN11A-202ENST00000444237 ATP5EP2Q5VTU8 51 aa4.07□□□□□ -1.76
SCN11A-202ENST00000444237 C9orf139Q6ZV77 190 aa4.07□□□□□ -1.76
SCN11A-202ENST00000444237 FAM216BQ8N7L0 139 aa4.07□□□□□ -1.76
SCN11A-202ENST00000444237 SLC25A29Q8N8R3 303 aa4.07□□□□□ -1.76
SCN11A-202ENST00000444237 SEC16AO15027 2179 aa4.07□□□□□ -1.76
SCN11A-202ENST00000444237 TRAV26-2A0A0B4J265 109 aa4.07□□□□□ -1.76
SCN11A-202ENST00000444237 IGHV3-35A0A0C4DH35 117 aa4.07□□□□□ -1.76
SCN11A-202ENST00000444237 H3BRN7 92 aa4.07□□□□□ -1.76
SCN11A-202ENST00000444237 MRPS36P82909 103 aaKnown RBP4.07□□□□□ -1.76
SCN11A-202ENST00000444237 FAM167A-AS1Q96KT0 104 aa4.07□□□□□ -1.76
SCN11A-202ENST00000444237 MSRB2Q9Y3D2 182 aa4.07□□□□□ -1.76
SCN11A-202ENST00000444237 S4R3C0 116 aa4.07□□□□□ -1.76
SCN11A-202ENST00000444237 A0A1W2PRX2 142 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 C11orf86A6NJI1 115 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 MRPS12O15235 138 aaKnown RBP4.06□□□□□ -1.76
SCN11A-202ENST00000444237 KLHL30-AS1Q8NEE0 82 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 WFDC11Q8NEX6 87 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 RNF5Q99942 180 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 IGHV3OR16-13A0A075B7E8 117 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 IGHV3-74A0A0B4J1X5 117 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 IGHV3-66A0A0C4DH42 116 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 NBR2O15453 112 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 ZNF883P0CG24 379 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 Q6ZT83 130 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 ZNF295-AS1Q8N0V1 137 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 TOMM6Q96B49 74 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 PRO3102Q9H379 93 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 SDK1Q7Z5N4 2213 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 IGKV2D-26A0A0A0MRZ7 120 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 NDUFC1O43677 76 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 IGLV3-19P01714 112 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 IGHV3-23P01764 117 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 C20orf197Q8N268 126 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 JPT2Q9H910 190 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 METRNQ9UJH8 293 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 SERP1Q9Y6X1 66 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 LTBP2Q14767 1821 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 KNL1Q8NG31 2342 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 IGLV3-12A0A075B6K2 115 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 TRBV30A0A0K0K1B3 111 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 H0YGX0 51 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 CD177Q8N6Q3 437 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 SPRY4Q9C004 299 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 ORMDL1Q9P0S3 153 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 SDHAF1A6NFY7 115 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 CRLF1O75462 422 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 LOXL1Q08397 574 aaPredicted RBP4.06□□□□□ -1.76
SCN11A-202ENST00000444237 RHOHQ15669 191 aa4.06□□□□□ -1.76
SCN11A-202ENST00000444237 GP9P14770 177 aa4.05□□□□□ -1.76
SCN11A-202ENST00000444237 ATP1A1-AS1Q5TC04 95 aa4.05□□□□□ -1.76
SCN11A-202ENST00000444237 KIAA1671Q9BY89 1806 aa4.05□□□□□ -1.76
SCN11A-202ENST00000444237 I3L3M4 83 aa4.05□□□□□ -1.76
SCN11A-202ENST00000444237 TFF1P04155 84 aa4.05□□□□□ -1.76
SCN11A-202ENST00000444237 EGR2P11161 476 aaPredicted RBP4.05□□□□□ -1.76
SCN11A-202ENST00000444237 DPM3Q9P2X0 92 aa4.05□□□□□ -1.76
SCN11A-202ENST00000444237 UNC13CQ8NB66 2214 aa4.05□□□□□ -1.76
SCN11A-202ENST00000444237 MDC1Q14676 2089 aaKnown RBP4.05□□□□□ -1.76
SCN11A-202ENST00000444237 TRBV7-3A0A075B6L6 115 aa4.05□□□□□ -1.76
SCN11A-202ENST00000444237 LOC107984640A0A0U1RRK4 108 aa4.05□□□□□ -1.76
SCN11A-202ENST00000444237 PF4P02776 101 aa4.05□□□□□ -1.76
SCN11A-202ENST00000444237 CD59P13987 128 aa4.05□□□□□ -1.76
SCN11A-202ENST00000444237 RSPO1Q2MKA7 263 aaPredicted RBP4.05□□□□□ -1.76
SCN11A-202ENST00000444237 SIGLEC15Q6ZMC9 328 aa4.05□□□□□ -1.76
SCN11A-202ENST00000444237 BAALCQ8WXS3 180 aa4.05□□□□□ -1.76
SCN11A-202ENST00000444237 CLEC2BQ92478 149 aa4.05□□□□□ -1.76
SCN11A-202ENST00000444237 DIDO1Q9BTC0 2240 aaKnown RBP4.05□□□□□ -1.76
SCN11A-202ENST00000444237 IGKV1-16P04430 117 aa4.05□□□□□ -1.76
SCN11A-202ENST00000444237 MDFICQ9P1T7 246 aa4.05□□□□□ -1.76
SCN11A-202ENST00000444237 KMT2EQ8IZD2 1858 aa4.05□□□□□ -1.76
SCN11A-202ENST00000444237 RALGAPA1Q6GYQ0 2036 aa4.05□□□□□ -1.76
SCN11A-202ENST00000444237 IGHV3-49A0A0A0MS15 119 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 IGKV3OR2-268A0A0C4DH90 116 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 TMEM200BQ69YZ2 307 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 PRORYQ9H606 182 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 MYOFQ9NZM1 2061 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 TRAV12-2A0A075B6T6 113 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 JMJD7-PLA2G4BH0Y9G9 81 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 EDN2P20800 178 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 ERCC8Q13216 396 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 RFPL3SP0C7P2 107 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms