RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 PIK3C2BO00750 1634 aa2.64□□□□□ -1.99
TM9SF3-202ENST00000443638 EFCAB6Q5THR3 1501 aa2.64□□□□□ -1.99
TM9SF3-202ENST00000443638 FOCADQ5VW36 1801 aa2.64□□□□□ -1.99
TM9SF3-202ENST00000443638 TRAV27A0A087WT01 109 aa2.64□□□□□ -1.99
TM9SF3-202ENST00000443638 TCRAP04437 139 aa2.64□□□□□ -1.99
TM9SF3-202ENST00000443638 ASAH2BP0C7U1 165 aa2.64□□□□□ -1.99
TM9SF3-202ENST00000443638 AKAIN1P0CW23 69 aa2.64□□□□□ -1.99
TM9SF3-202ENST00000443638 RPL26P61254 145 aaKnown RBP2.64□□□□□ -1.99
TM9SF3-202ENST00000443638 PLGLB1Q02325 96 aa2.64□□□□□ -1.99
TM9SF3-202ENST00000443638 DIAPH2-AS1Q14236 149 aa2.64□□□□□ -1.99
TM9SF3-202ENST00000443638 CDK5R1Q15078 307 aa2.64□□□□□ -1.99
TM9SF3-202ENST00000443638 OR4B1Q8NGF8 309 aa2.64□□□□□ -1.99
TM9SF3-202ENST00000443638 SLC50A1Q9BRV3 221 aa2.64□□□□□ -1.99
TM9SF3-202ENST00000443638 CCDC167Q9P0B6 97 aa2.64□□□□□ -1.99
TM9SF3-202ENST00000443638 RPL26L1Q9UNX3 145 aaKnown RBP2.64□□□□□ -1.99
TM9SF3-202ENST00000443638 ZFP30Q9Y2G7 519 aa2.64□□□□□ -1.99
TM9SF3-202ENST00000443638 INO80Q9ULG1 1556 aaPredicted RBP2.64□□□□□ -1.99
TM9SF3-202ENST00000443638 MARF1Q9Y4F3 1742 aaKnown RBP2.64□□□□□ -1.99
TM9SF3-202ENST00000443638 MYH7P12883 1935 aa2.64□□□□□ -1.99
TM9SF3-202ENST00000443638 FANCMQ8IYD8 2048 aa2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 GOLGB1Q14789 3259 aaKnown RBP2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 IGKV2D-26A0A0A0MRZ7 120 aa2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 FAM236AA0A1B0GUQ0 79 aa2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 FAM236BA0A1B0GV22 79 aa2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 PVALEFA0A1B0GWK0 134 aa2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 BBIP1A8MTZ0 92 aa2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 UQCRQO14949 82 aa2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 SLC25A5P05141 298 aaKnown RBP2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 SSR2P43308 183 aa2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 GNG4P50150 75 aa2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 MRPS36P82909 103 aaKnown RBP2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 TEX261Q6UWH6 196 aa2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 C8orf59Q8N0T1 100 aaPredicted RBP2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 OR5D14Q8NGL3 314 aa2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 PP6455Q8WZ26 134 aa2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 POP5Q969H6 163 aaKnown RBP2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 NAA38Q9BRA0 125 aaKnown RBP2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 LY96Q9Y6Y9 160 aa2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 N4BP2Q86UW6 1770 aaPredicted RBP2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 TMEM131LA2VDJ0 1609 aa2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 PREX2Q70Z35 1606 aa2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 MBD5Q9P267 1494 aa2.63□□□□□ -1.99
TM9SF3-202ENST00000443638 KIAA1107Q9UPP5 1409 aa2.62□□□□□ -1.99
TM9SF3-202ENST00000443638 LOC100130705A0A1B0GUX0 176 aa2.62□□□□□ -1.99
TM9SF3-202ENST00000443638 ZNF737O75373 536 aa2.62□□□□□ -1.99
TM9SF3-202ENST00000443638 UBL3O95164 117 aa2.62□□□□□ -1.99
TM9SF3-202ENST00000443638 IFNA17P01571 189 aa2.62□□□□□ -1.99
TM9SF3-202ENST00000443638 HLA-DRB4P13762 266 aa2.62□□□□□ -1.99
TM9SF3-202ENST00000443638 CCSMST1Q4G0I0 132 aa2.62□□□□□ -1.99
TM9SF3-202ENST00000443638 RPS19BP1Q86WX3 136 aaKnown RBP2.62□□□□□ -1.99
TM9SF3-202ENST00000443638 LYPD1Q8N2G4 141 aa2.62□□□□□ -1.99
TM9SF3-202ENST00000443638 ACBD7Q8N6N7 88 aa2.62□□□□□ -1.99
TM9SF3-202ENST00000443638 OR4C12Q96R67 309 aa2.62□□□□□ -1.99
TM9SF3-202ENST00000443638 SDF2Q99470 211 aa2.62□□□□□ -1.99
TM9SF3-202ENST00000443638 BOKQ9UMX3 212 aaPredicted RBP2.62□□□□□ -1.99
TM9SF3-202ENST00000443638 HLA-DRB4X5D2U9 266 aa2.62□□□□□ -1.99
TM9SF3-202ENST00000443638 PRXQ9BXM0 1461 aa2.62□□□□□ -1.99
TM9SF3-202ENST00000443638 SBF1O95248 1867 aa2.62□□□□□ -1.99
TM9SF3-202ENST00000443638 CPAMD8Q8IZJ3 1885 aa2.62□□□□□ -1.99
TM9SF3-202ENST00000443638 CDC42BPAQ5VT25 1732 aa2.62□□□□□ -1.99
TM9SF3-202ENST00000443638 SDK2Q58EX2 2172 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 CCDC88CQ9P219 2028 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 PXDNQ92626 1479 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 PDE4DIPQ5VU43 2346 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 IGKV3D-11A0A0A0MRZ8 115 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 A0A0G2JMM0 328 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 A0A1W2PPB8 328 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 KIR3DP1A8MWS1 328 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 C17orf112F2Z3M2 114 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 CDC42EP2O14613 210 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 SNAPC5O75971 98 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 HBDP02042 147 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 LSM3P62310 102 aaKnown RBP2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 DEFB113Q30KQ7 82 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 MEIG1Q5JSS6 88 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 C1orf134Q5TEV5 83 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 IZUMO2Q6UXV1 221 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 TMEM91Q6ZNR0 172 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 LINC00301Q8NCQ3 95 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 HYLS1Q96M11 299 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 RERGLQ9H628 205 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 TRPM2O94759 1503 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 SCN8AQ9UQD0 1980 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 ADGRB2O60241 1585 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 NUP98P52948 1817 aa2.61□□□□□ -1.99
TM9SF3-202ENST00000443638 ZNF609O15014 1411 aa2.6□□□□□ -1.99
TM9SF3-202ENST00000443638 CLIP1P30622 1438 aa2.6□□□□□ -1.99
TM9SF3-202ENST00000443638 PLCH1Q4KWH8 1693 aa2.6□□□□□ -1.99
TM9SF3-202ENST00000443638 A0A087WSZ3 146 aa2.6□□□□□ -1.99
TM9SF3-202ENST00000443638 SPAARA0A1B0GVQ0 90 aa2.6□□□□□ -1.99
TM9SF3-202ENST00000443638 TMEM218A2RU14 115 aa2.6□□□□□ -1.99
TM9SF3-202ENST00000443638 IFITM5A6NNB3 132 aa2.6□□□□□ -1.99
TM9SF3-202ENST00000443638 M0R143 59 aa2.6□□□□□ -1.99
TM9SF3-202ENST00000443638 CCL4P13236 92 aa2.6□□□□□ -1.99
TM9SF3-202ENST00000443638 FABP4P15090 132 aa2.6□□□□□ -1.99
TM9SF3-202ENST00000443638 PKIAP61925 76 aa2.6□□□□□ -1.99
TM9SF3-202ENST00000443638 SMIM5Q71RC9 77 aa2.6□□□□□ -1.99
TM9SF3-202ENST00000443638 TEN1Q86WV5 123 aa2.6□□□□□ -1.99
TM9SF3-202ENST00000443638 COMMD3Q9UBI1 195 aa2.6□□□□□ -1.99
TM9SF3-202ENST00000443638 LAMC1P11047 1609 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms