RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 LOC102724200A0A096LPH7 203 aaPredicted RBP4.55□□□□□ -1.68
VPS50-205ENST00000441602 A0A1W2PRX2 142 aa4.55□□□□□ -1.68
VPS50-205ENST00000441602 HSBP1O75506 76 aa4.55□□□□□ -1.68
VPS50-205ENST00000441602 PPBPP02775 128 aa4.55□□□□□ -1.68
VPS50-205ENST00000441602 TWIST1Q15672 202 aa4.55□□□□□ -1.68
VPS50-205ENST00000441602 DEFB136Q30KP8 78 aa4.55□□□□□ -1.68
VPS50-205ENST00000441602 DNLZQ5SXM8 178 aa4.55□□□□□ -1.68
VPS50-205ENST00000441602 KALRNO60229 2985 aa4.54□□□□□ -1.68
VPS50-205ENST00000441602 GRIFINA4D1Z8 144 aa4.54□□□□□ -1.68
VPS50-205ENST00000441602 AMBPP02760 352 aa4.54□□□□□ -1.68
VPS50-205ENST00000441602 IGLC6P0CF74 106 aa4.54□□□□□ -1.68
VPS50-205ENST00000441602 CD28P10747 220 aa4.54□□□□□ -1.68
VPS50-205ENST00000441602 RNASE4P34096 147 aaKnown RBP4.54□□□□□ -1.68
VPS50-205ENST00000441602 ZNF80P51504 273 aaPredicted RBP4.54□□□□□ -1.68
VPS50-205ENST00000441602 SPANXN1Q5VSR9 72 aa4.54□□□□□ -1.68
VPS50-205ENST00000441602 FAM159AQ6UWV7 190 aa4.54□□□□□ -1.68
VPS50-205ENST00000441602 RAX2Q96IS3 184 aa4.54□□□□□ -1.68
VPS50-205ENST00000441602 POLQO75417 2590 aa4.54□□□□□ -1.68
VPS50-205ENST00000441602 A0A0J9YX75 114 aa4.54□□□□□ -1.68
VPS50-205ENST00000441602 C7orf71A4D174 169 aa4.54□□□□□ -1.68
VPS50-205ENST00000441602 CSN3P07498 182 aa4.54□□□□□ -1.68
VPS50-205ENST00000441602 ESDP10768 282 aa4.54□□□□□ -1.68
VPS50-205ENST00000441602 S100A12P80511 92 aa4.54□□□□□ -1.68
VPS50-205ENST00000441602 OR2K2Q8NGT1 345 aa4.54□□□□□ -1.68
VPS50-205ENST00000441602 DLX4Q92988 240 aaPredicted RBP4.54□□□□□ -1.68
VPS50-205ENST00000441602 HIST1H2BLQ99880 126 aa4.54□□□□□ -1.68
VPS50-205ENST00000441602 ALKBH7Q9BT30 221 aaPredicted RBP4.54□□□□□ -1.68
VPS50-205ENST00000441602 ABCA12Q86UK0 2595 aa4.54□□□□□ -1.68
VPS50-205ENST00000441602 J3KRW8 73 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 SERF1AO75920 110 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 OR5AL1P0C617 328 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 PRB4P10163 310 aaPredicted RBP4.53□□□□□ -1.68
VPS50-205ENST00000441602 SLAQ13239 276 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 ZNF493Q6ZR52 646 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 FA2HQ7L5A8 372 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 NDUFA11Q86Y39 141 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 ZFAND2AQ8N6M9 145 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 CITED2Q99967 270 aaPredicted RBP4.53□□□□□ -1.68
VPS50-205ENST00000441602 SSBP4Q9BWG4 385 aaPredicted RBP4.53□□□□□ -1.68
VPS50-205ENST00000441602 TMEM191AQ9H0A3 160 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 SIGLEC8Q9NYZ4 499 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 ZNF705DP0CH99 300 aaPredicted RBP4.53□□□□□ -1.68
VPS50-205ENST00000441602 ZNF705BP0CI00 300 aaPredicted RBP4.53□□□□□ -1.68
VPS50-205ENST00000441602 AMTP48728 403 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 FAM104BQ5XKR9 115 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 RNASEKQ6P5S7 137 aaKnown RBP4.53□□□□□ -1.68
VPS50-205ENST00000441602 APRG1Q8IVJ8 170 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 CHCHD1Q96BP2 118 aaKnown RBP4.53□□□□□ -1.68
VPS50-205ENST00000441602 LAMTOR2Q9Y2Q5 125 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 TRGV11A0A075B6L2 103 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 PF4P02776 101 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 DEFB131AP59861 70 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 FHL3Q13643 280 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 DEFB114Q30KQ6 69 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 GFI1BQ5VTD9 330 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 C18orf65Q6ZTR6 163 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 ORMDL3Q8N138 153 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 C11orf44Q8N8P7 122 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 SYT8Q8NBV8 401 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 C18orf32Q8TCD1 76 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 PHLDA3Q9Y5J5 127 aa4.53□□□□□ -1.68
VPS50-205ENST00000441602 F6UB75 175 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 CKS2P33552 79 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 IQCJQ1A5X6 159 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 PRSS3P2Q8NHM4 247 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 PRELID3AQ96N28 172 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 LAMA5O15230 3695 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 INAFM1C9JVW0 142 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 SNAI2O43623 268 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 FRMD6-AS1P0C7T7 363 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 SMIM17P0DL12 118 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 CD33P20138 364 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 CDKN1BP46527 198 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 PROK1P58294 105 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 GDF5OSQ5U4N7 250 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 TMEM61Q8N0U2 210 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 TMEM256Q8N2U0 113 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 FAM19A4Q96LR4 140 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 CNFNQ9BYD5 112 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 NIT2Q9NQR4 276 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 TIMM8BQ9Y5J9 83 aaPredicted RBP4.52□□□□□ -1.69
VPS50-205ENST00000441602 CCDC168Q8NDH2 2452 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 IGKV3D-20A0A0C4DH25 116 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 KLLNB2CW77 178 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 H3BVH4 76 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 CRLF1O75462 422 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 ZNF324O75467 553 aaPredicted RBP4.52□□□□□ -1.69
VPS50-205ENST00000441602 NTF3P20783 257 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 NSUN5P1Q3KNT7 163 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 ANXA2RQ3ZCQ2 193 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 DUX3Q96PT4 197 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 SMR3AQ99954 134 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 MAP1LC3AQ9H492 121 aa4.52□□□□□ -1.69
VPS50-205ENST00000441602 C20orf202A1L168 122 aa4.51□□□□□ -1.69
VPS50-205ENST00000441602 M0R2Z0 102 aa4.51□□□□□ -1.69
VPS50-205ENST00000441602 PPP1R17O96001 155 aa4.51□□□□□ -1.69
VPS50-205ENST00000441602 HLA-DRB4P13762 266 aa4.51□□□□□ -1.69
VPS50-205ENST00000441602 EDN2P20800 178 aa4.51□□□□□ -1.69
VPS50-205ENST00000441602 SSTP61278 116 aa4.51□□□□□ -1.69
VPS50-205ENST00000441602 AP1S3Q96PC3 154 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 201.5 ms