RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 IGHV3OR16-8A0A075B7F1 116 aa15.77■□□□□ 0.11
SHOX2-203ENST00000441443 TNFRSF13BO14836 293 aaPredicted RBP15.77■□□□□ 0.11
SHOX2-203ENST00000441443 PDE6HQ13956 83 aa15.77■□□□□ 0.11
SHOX2-203ENST00000441443 A0A1B0GWB2 263 aa15.76■□□□□ 0.11
SHOX2-203ENST00000441443 IGHV3-23P01764 117 aa15.76■□□□□ 0.11
SHOX2-203ENST00000441443 TTC9CQ8N5M4 171 aa15.76■□□□□ 0.11
SHOX2-203ENST00000441443 RNASE6Q93091 150 aaKnown RBP15.76■□□□□ 0.11
SHOX2-203ENST00000441443 BUB1B-PAK6H3BSN5 160 aa15.76■□□□□ 0.11
SHOX2-203ENST00000441443 ATP5LO75964 103 aa15.76■□□□□ 0.11
SHOX2-203ENST00000441443 PRO0461Q9UI25 63 aa15.76■□□□□ 0.11
SHOX2-203ENST00000441443 VSTM5A8MXK1 200 aa15.76■□□□□ 0.11
SHOX2-203ENST00000441443 IGLV1-47P01700 117 aa15.76■□□□□ 0.11
SHOX2-203ENST00000441443 PSMG4Q5JS54 123 aa15.76■□□□□ 0.11
SHOX2-203ENST00000441443 TRAV26-1A0A087WT03 109 aa15.75■□□□□ 0.11
SHOX2-203ENST00000441443 E7EQL1 145 aa15.75■□□□□ 0.11
SHOX2-203ENST00000441443 DTX2Q86UW9 622 aa15.75■□□□□ 0.11
SHOX2-203ENST00000441443 RPEQ96AT9 228 aa15.75■□□□□ 0.11
SHOX2-203ENST00000441443 LINC01546A6NGU7 62 aa15.75■□□□□ 0.11
SHOX2-203ENST00000441443 GRNP28799 593 aaKnown RBP15.75■□□□□ 0.11
SHOX2-203ENST00000441443 SRSF1Q07955 248 aaKnown RBP eCLIP15.75■□□□□ 0.11
SHOX2-203ENST00000441443 RALYQ9UKM9 306 aaKnown RBP15.75■□□□□ 0.11
SHOX2-203ENST00000441443 SVEP1Q4LDE5 3571 aa15.74■□□□□ 0.11
SHOX2-203ENST00000441443 TRAV26-2A0A0B4J265 109 aa15.74■□□□□ 0.11
SHOX2-203ENST00000441443 ERCC8Q13216 396 aa15.74■□□□□ 0.11
SHOX2-203ENST00000441443 RRN3P1Q2M238 152 aa15.74■□□□□ 0.11
SHOX2-203ENST00000441443 MAP1AP78559 2803 aaPredicted RBP15.74■□□□□ 0.11
SHOX2-203ENST00000441443 COL12A1Q99715 3063 aa15.74■□□□□ 0.11
SHOX2-203ENST00000441443 EFNA4P52798 201 aa15.73■□□□□ 0.11
SHOX2-203ENST00000441443 SVIPQ8NHG7 77 aa15.73■□□□□ 0.11
SHOX2-203ENST00000441443 SFTA2Q6UW10 78 aa15.73■□□□□ 0.11
SHOX2-203ENST00000441443 TRGV3P03979 118 aa15.73■□□□□ 0.11
SHOX2-203ENST00000441443 ZNF502Q8TBZ5 544 aa15.73■□□□□ 0.11
SHOX2-203ENST00000441443 MYOZ3Q8TDC0 251 aa15.73■□□□□ 0.11
SHOX2-203ENST00000441443 IGHV3-35A0A0C4DH35 117 aa15.72■□□□□ 0.11
SHOX2-203ENST00000441443 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.72■□□□□ 0.11
SHOX2-203ENST00000441443 APOMO95445 188 aa15.72■□□□□ 0.11
SHOX2-203ENST00000441443 SCGB2A2Q13296 93 aa15.72■□□□□ 0.11
SHOX2-203ENST00000441443 Q8N8P6 123 aa15.72■□□□□ 0.11
SHOX2-203ENST00000441443 TMEM190Q8WZ59 177 aa15.72■□□□□ 0.11
SHOX2-203ENST00000441443 LY6HO94772 140 aa15.72■□□□□ 0.11
SHOX2-203ENST00000441443 IGHG4P01861 327 aa15.72■□□□□ 0.11
SHOX2-203ENST00000441443 COX8CQ7Z4L0 72 aa15.72■□□□□ 0.11
SHOX2-203ENST00000441443 IGLV2-18A0A075B6J9 118 aa15.71■□□□□ 0.11
SHOX2-203ENST00000441443 CYSLTR1Q9Y271 337 aa15.71■□□□□ 0.11
SHOX2-203ENST00000441443 NCBP2LA6PVI3 153 aaKnown RBP15.7■□□□□ 0.1
SHOX2-203ENST00000441443 FABP5P3A8MUU1 101 aa15.7■□□□□ 0.1
SHOX2-203ENST00000441443 CRYBA4P53673 196 aa15.7■□□□□ 0.1
SHOX2-203ENST00000441443 SMAD5-AS1Q9Y6J3 95 aa15.7■□□□□ 0.1
SHOX2-203ENST00000441443 TIMM23O14925 209 aa15.7■□□□□ 0.1
SHOX2-203ENST00000441443 TAL2Q16559 108 aa15.7■□□□□ 0.1
SHOX2-203ENST00000441443 DYNAPQ8N1N2 210 aa15.7■□□□□ 0.1
SHOX2-203ENST00000441443 SYT8Q8NBV8 401 aa15.7■□□□□ 0.1
SHOX2-203ENST00000441443 CNFNQ9BYD5 112 aa15.7■□□□□ 0.1
SHOX2-203ENST00000441443 TRBV7-3A0A075B6L6 115 aa15.69■□□□□ 0.1
SHOX2-203ENST00000441443 GEMIN7Q9H840 131 aaKnown RBP15.69■□□□□ 0.1
SHOX2-203ENST00000441443 PRSS47A8MTI9 375 aa15.69■□□□□ 0.1
SHOX2-203ENST00000441443 PRAC2D3DTV9 90 aa15.69■□□□□ 0.1
SHOX2-203ENST00000441443 PSMG3-AS1Q96PY0 264 aa15.69■□□□□ 0.1
SHOX2-203ENST00000441443 KLK15Q9H2R5 256 aa15.69■□□□□ 0.1
SHOX2-203ENST00000441443 HIVEP3Q5T1R4 2406 aa15.69■□□□□ 0.1
SHOX2-203ENST00000441443 A0A087WX48 190 aa15.68■□□□□ 0.1
SHOX2-203ENST00000441443 HLA-DRB4P13762 266 aa15.68■□□□□ 0.1
SHOX2-203ENST00000441443 RPL7P18124 248 aaKnown RBP15.68■□□□□ 0.1
SHOX2-203ENST00000441443 LAGE3Q14657 143 aa15.68■□□□□ 0.1
SHOX2-203ENST00000441443 TCTEX1D4Q5JR98 221 aa15.68■□□□□ 0.1
SHOX2-203ENST00000441443 CFHR4Q92496 578 aa15.68■□□□□ 0.1
SHOX2-203ENST00000441443 MRAP2Q96G30 205 aa15.68■□□□□ 0.1
SHOX2-203ENST00000441443 UFC1Q9Y3C8 167 aa15.68■□□□□ 0.1
SHOX2-203ENST00000441443 HLA-DRB4X5D2U9 266 aa15.68■□□□□ 0.1
SHOX2-203ENST00000441443 CD3EP07766 207 aa15.68■□□□□ 0.1
SHOX2-203ENST00000441443 MORN3Q6PF18 240 aaPredicted RBP15.68■□□□□ 0.1
SHOX2-203ENST00000441443 F8W735 103 aaPredicted RBP15.68■□□□□ 0.1
SHOX2-203ENST00000441443 K7ENP7 123 aa15.68■□□□□ 0.1
SHOX2-203ENST00000441443 MFAP4P55083 255 aa15.68■□□□□ 0.1
SHOX2-203ENST00000441443 RAB1BQ9H0U4 201 aa15.68■□□□□ 0.1
SHOX2-203ENST00000441443 PGPEP1Q9NXJ5 209 aa15.68■□□□□ 0.1
SHOX2-203ENST00000441443 KAAG1Q9UBP8 84 aa15.68■□□□□ 0.1
SHOX2-203ENST00000441443 FOXI1Q12951 378 aa15.67■□□□□ 0.1
SHOX2-203ENST00000441443 IL17RELQ6ZVW7 336 aa15.67■□□□□ 0.1
SHOX2-203ENST00000441443 FANCD2OSQ96PS1 177 aa15.67■□□□□ 0.1
SHOX2-203ENST00000441443 SPG11Q96JI7 2443 aa15.67■□□□□ 0.1
SHOX2-203ENST00000441443 RNF182Q8N6D2 247 aa15.67■□□□□ 0.1
SHOX2-203ENST00000441443 HOXA3O43365 443 aaPredicted RBP15.66■□□□□ 0.1
SHOX2-203ENST00000441443 SMCPP49901 116 aaPredicted RBP15.66■□□□□ 0.1
SHOX2-203ENST00000441443 NFE4Q86UQ8 179 aa15.66■□□□□ 0.1
SHOX2-203ENST00000441443 LINC01559Q495D7 138 aa15.65■□□□□ 0.1
SHOX2-203ENST00000441443 GLMPQ8WWB7 406 aa15.65■□□□□ 0.1
SHOX2-203ENST00000441443 CDIP1Q9H305 208 aa15.65■□□□□ 0.1
SHOX2-203ENST00000441443 MRPL16Q9NX20 251 aaKnown RBP15.65■□□□□ 0.1
SHOX2-203ENST00000441443 C11orf21Q9P2W6 132 aa15.65■□□□□ 0.1
SHOX2-203ENST00000441443 IGKV3D-20A0A0C4DH25 116 aa15.65■□□□□ 0.1
SHOX2-203ENST00000441443 C8orf86Q6ZUL3 223 aa15.65■□□□□ 0.1
SHOX2-203ENST00000441443 RAXQ9Y2V3 346 aa15.65■□□□□ 0.1
SHOX2-203ENST00000441443 MYMXA0A1B0GTQ4 84 aa15.65■□□□□ 0.1
SHOX2-203ENST00000441443 OR11H12B2RN74 326 aa15.65■□□□□ 0.1
SHOX2-203ENST00000441443 SPINK8P0C7L1 97 aa15.65■□□□□ 0.1
SHOX2-203ENST00000441443 NRACQ8N912 160 aa15.65■□□□□ 0.1
SHOX2-203ENST00000441443 OR11H1Q8NG94 326 aa15.65■□□□□ 0.1
SHOX2-203ENST00000441443 OR11H2Q8NH07 326 aa15.65■□□□□ 0.1
SHOX2-203ENST00000441443 PTH2Q96A98 100 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms