RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 TMEM88Q6PEY1 159 aa7.4□□□□□ -1.22
MCF2L-216ENST00000439475 FAM159AQ6UWV7 190 aa7.4□□□□□ -1.22
MCF2L-216ENST00000439475 GOLT1AQ6ZVE7 132 aa7.4□□□□□ -1.22
MCF2L-216ENST00000439475 C5orf17Q8NAS9 161 aa7.4□□□□□ -1.22
MCF2L-216ENST00000439475 Q8TAT8 98 aa7.4□□□□□ -1.22
MCF2L-216ENST00000439475 STOML3Q8TAV4 291 aa7.4□□□□□ -1.22
MCF2L-216ENST00000439475 SUN5Q8TC36 379 aa7.4□□□□□ -1.22
MCF2L-216ENST00000439475 GSN-AS1Q9NRJ2 163 aa7.4□□□□□ -1.22
MCF2L-216ENST00000439475 DNAH1Q9P2D7 4330 aa7.39□□□□□ -1.23
MCF2L-216ENST00000439475 TRGV2A0A075B6R0 118 aa7.39□□□□□ -1.23
MCF2L-216ENST00000439475 KANTRA0A1W2PQU2 76 aa7.39□□□□□ -1.23
MCF2L-216ENST00000439475 A0A1W2PRE2 83 aa7.39□□□□□ -1.23
MCF2L-216ENST00000439475 G3V3Q6 166 aa7.39□□□□□ -1.23
MCF2L-216ENST00000439475 ZNF415Q09FC8 603 aa7.39□□□□□ -1.23
MCF2L-216ENST00000439475 OR5I1Q13606 314 aa7.39□□□□□ -1.23
MCF2L-216ENST00000439475 RNF212Q495C1 297 aa7.39□□□□□ -1.23
MCF2L-216ENST00000439475 KCNRGQ8N5I3 272 aa7.39□□□□□ -1.23
MCF2L-216ENST00000439475 LINC00612Q8N6U2 182 aa7.39□□□□□ -1.23
MCF2L-216ENST00000439475 ATG101Q9BSB4 218 aa7.39□□□□□ -1.23
MCF2L-216ENST00000439475 NKX6-2Q9C056 277 aaPredicted RBP7.39□□□□□ -1.23
MCF2L-216ENST00000439475 TREM1Q9NP99 234 aa7.39□□□□□ -1.23
MCF2L-216ENST00000439475 ALMS1Q8TCU4 4167 aa7.38□□□□□ -1.23
MCF2L-216ENST00000439475 TRGV11A0A075B6L2 103 aa7.38□□□□□ -1.23
MCF2L-216ENST00000439475 TRAV21A0A0B4J279 112 aa7.38□□□□□ -1.23
MCF2L-216ENST00000439475 SMLR1H3BR10 107 aa7.38□□□□□ -1.23
MCF2L-216ENST00000439475 NUDT3O95989 172 aa7.38□□□□□ -1.23
MCF2L-216ENST00000439475 TCRAP04437 139 aa7.38□□□□□ -1.23
MCF2L-216ENST00000439475 TCL1AP56279 114 aa7.38□□□□□ -1.23
MCF2L-216ENST00000439475 Q6AWC8 147 aa7.38□□□□□ -1.23
MCF2L-216ENST00000439475 CYTL1Q9NRR1 136 aa7.38□□□□□ -1.23
MCF2L-216ENST00000439475 EPDR1Q9UM22 224 aa7.38□□□□□ -1.23
MCF2L-216ENST00000439475 RYR3Q15413 4870 aa7.38□□□□□ -1.23
MCF2L-216ENST00000439475 TRGV1A0A0A0MS02 117 aa7.37□□□□□ -1.23
MCF2L-216ENST00000439475 UMAD1C9J7I0 102 aa7.37□□□□□ -1.23
MCF2L-216ENST00000439475 PFDN1O60925 122 aa7.37□□□□□ -1.23
MCF2L-216ENST00000439475 IFNA7P01567 189 aa7.37□□□□□ -1.23
MCF2L-216ENST00000439475 SEC11BP0C7V7 166 aa7.37□□□□□ -1.23
MCF2L-216ENST00000439475 PPT1P50897 306 aa7.37□□□□□ -1.23
MCF2L-216ENST00000439475 CCL18P55774 89 aa7.37□□□□□ -1.23
MCF2L-216ENST00000439475 GNG5P63218 68 aa7.37□□□□□ -1.23
MCF2L-216ENST00000439475 LGALS9BQ3B8N2 356 aa7.37□□□□□ -1.23
MCF2L-216ENST00000439475 ZFP69Q49AA0 526 aa7.37□□□□□ -1.23
MCF2L-216ENST00000439475 MUC21Q5SSG8 566 aa7.37□□□□□ -1.23
MCF2L-216ENST00000439475 SAPCD1Q5SSQ6 148 aa7.37□□□□□ -1.23
MCF2L-216ENST00000439475 PRR9Q5T870 116 aa7.37□□□□□ -1.23
MCF2L-216ENST00000439475 C11orf72Q8NBR9 251 aa7.37□□□□□ -1.23
MCF2L-216ENST00000439475 KCNS1Q96KK3 526 aa7.37□□□□□ -1.23
MCF2L-216ENST00000439475 C18orf15Q96N68 181 aa7.37□□□□□ -1.23
MCF2L-216ENST00000439475 SPXQ9BT56 116 aa7.37□□□□□ -1.23
MCF2L-216ENST00000439475 ZNF471Q9BX82 626 aaPredicted RBP7.37□□□□□ -1.23
MCF2L-216ENST00000439475 PSG8Q9UQ74 426 aa7.37□□□□□ -1.23
MCF2L-216ENST00000439475 KLF12Q9Y4X4 402 aa7.37□□□□□ -1.23
MCF2L-216ENST00000439475 F6UZH7 168 aa7.36□□□□□ -1.23
MCF2L-216ENST00000439475 SPINK4O60575 86 aa7.36□□□□□ -1.23
MCF2L-216ENST00000439475 FAM3BP58499 235 aaPredicted RBP7.36□□□□□ -1.23
MCF2L-216ENST00000439475 FLI1Q01543 452 aaPredicted RBP7.36□□□□□ -1.23
MCF2L-216ENST00000439475 SLAQ13239 276 aa7.36□□□□□ -1.23
MCF2L-216ENST00000439475 Q6ZTI0 123 aa7.36□□□□□ -1.23
MCF2L-216ENST00000439475 CYB561D1Q8N8Q1 229 aa7.36□□□□□ -1.23
MCF2L-216ENST00000439475 NAGKQ9UJ70 344 aa7.36□□□□□ -1.23
MCF2L-216ENST00000439475 TRAV8-1A0A0A6YYK1 113 aa7.35□□□□□ -1.23
MCF2L-216ENST00000439475 MAP1LC3B2A6NCE7 125 aa7.35□□□□□ -1.23
MCF2L-216ENST00000439475 H3BNG1 76 aa7.35□□□□□ -1.23
MCF2L-216ENST00000439475 BCL2L11O43521 198 aa7.35□□□□□ -1.23
MCF2L-216ENST00000439475 FGF8P55075 233 aaPredicted RBP7.35□□□□□ -1.23
MCF2L-216ENST00000439475 ZNF726P1Q15940 193 aa7.35□□□□□ -1.23
MCF2L-216ENST00000439475 TMEM183BQ1AE95 376 aa7.35□□□□□ -1.23
MCF2L-216ENST00000439475 SMUG1Q53HV7 270 aa7.35□□□□□ -1.23
MCF2L-216ENST00000439475 EIF5AL1Q6IS14 154 aaKnown RBP7.35□□□□□ -1.23
MCF2L-216ENST00000439475 SSX7Q7RTT5 188 aa7.35□□□□□ -1.23
MCF2L-216ENST00000439475 PRNTQ86SH4 94 aa7.35□□□□□ -1.23
MCF2L-216ENST00000439475 TMEM183AQ8IXX5 376 aa7.35□□□□□ -1.23
MCF2L-216ENST00000439475 TMEM75Q8N9X5 138 aa7.35□□□□□ -1.23
MCF2L-216ENST00000439475 OR11H4Q8NGC9 324 aa7.35□□□□□ -1.23
MCF2L-216ENST00000439475 HIST1H2BAQ96A08 127 aa7.35□□□□□ -1.23
MCF2L-216ENST00000439475 SGK494Q96LW2 274 aa7.35□□□□□ -1.23
MCF2L-216ENST00000439475 MAP1LC3BQ9GZQ8 125 aa7.35□□□□□ -1.23
MCF2L-216ENST00000439475 SDF2L1Q9HCN8 221 aa7.35□□□□□ -1.23
MCF2L-216ENST00000439475 TP53TG3Q9ULZ0 132 aa7.35□□□□□ -1.23
MCF2L-216ENST00000439475 RYR2Q92736 4967 aa7.35□□□□□ -1.23
MCF2L-216ENST00000439475 LYSTQ99698 3801 aa7.34□□□□□ -1.23
MCF2L-216ENST00000439475 TRAV26-1A0A087WT03 109 aa7.34□□□□□ -1.23
MCF2L-216ENST00000439475 GGTLC3B5MD39 225 aa7.34□□□□□ -1.23
MCF2L-216ENST00000439475 TPT1P13693 172 aaKnown RBP7.34□□□□□ -1.23
MCF2L-216ENST00000439475 UBE2G2P60604 165 aa7.34□□□□□ -1.23
MCF2L-216ENST00000439475 TDRG1Q3Y452 100 aa7.34□□□□□ -1.23
MCF2L-216ENST00000439475 DPPA3Q6W0C5 159 aa7.34□□□□□ -1.23
MCF2L-216ENST00000439475 Q6ZQT7 251 aa7.34□□□□□ -1.23
MCF2L-216ENST00000439475 TMUB2Q71RG4 321 aa7.34□□□□□ -1.23
MCF2L-216ENST00000439475 TMPRSS5Q9H3S3 457 aa7.34□□□□□ -1.23
MCF2L-216ENST00000439475 A0A0J9YY99 117 aa7.33□□□□□ -1.24
MCF2L-216ENST00000439475 FAM74A7A6NL05 159 aa7.33□□□□□ -1.24
MCF2L-216ENST00000439475 PEX7O00628 323 aa7.33□□□□□ -1.24
MCF2L-216ENST00000439475 GCGP01275 180 aa7.33□□□□□ -1.24
MCF2L-216ENST00000439475 HOXA5P20719 270 aa7.33□□□□□ -1.24
MCF2L-216ENST00000439475 SOHLH1Q5JUK2 328 aa7.33□□□□□ -1.24
MCF2L-216ENST00000439475 CST9LP1Q5W188 147 aa7.33□□□□□ -1.24
MCF2L-216ENST00000439475 TVP23CQ96ET8 276 aa7.33□□□□□ -1.24
MCF2L-216ENST00000439475 TCEAL7Q9BRU2 100 aa7.33□□□□□ -1.24
MCF2L-216ENST00000439475 MRPL16Q9NX20 251 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms