RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 MRPL35Q9NZE8 188 aaKnown RBP4.01□□□□□ -1.77
RIF1-203ENST00000428287 APOMO95445 188 aa4.01□□□□□ -1.77
RIF1-203ENST00000428287 MOGAT3Q86VF5 341 aa4.01□□□□□ -1.77
RIF1-203ENST00000428287 PRR25Q96S07 402 aa4.01□□□□□ -1.77
RIF1-203ENST00000428287 K7ERJ3 54 aa4.01□□□□□ -1.77
RIF1-203ENST00000428287 MAGEA5P43359 124 aa4.01□□□□□ -1.77
RIF1-203ENST00000428287 TTTY13Q9BZ97 58 aa4.01□□□□□ -1.77
RIF1-203ENST00000428287 TEX36Q5VZQ5 186 aa4.01□□□□□ -1.77
RIF1-203ENST00000428287 C10orf126Q8N4M7 172 aa4.01□□□□□ -1.77
RIF1-203ENST00000428287 CARD19Q96LW7 228 aa4.01□□□□□ -1.77
RIF1-203ENST00000428287 M0R3E3 92 aa4□□□□□ -1.77
RIF1-203ENST00000428287 IGHG3P01860 377 aa4□□□□□ -1.77
RIF1-203ENST00000428287 FLYWCH2Q96CP2 140 aaKnown RBP4□□□□□ -1.77
RIF1-203ENST00000428287 RNF183Q96D59 192 aa4□□□□□ -1.77
RIF1-203ENST00000428287 SSUH2Q9Y2M2 353 aa4□□□□□ -1.77
RIF1-203ENST00000428287 STAB2Q8WWQ8 2551 aa4□□□□□ -1.77
RIF1-203ENST00000428287 TRAV12-1A0A0B4J245 112 aa4□□□□□ -1.77
RIF1-203ENST00000428287 NPYP01303 97 aa4□□□□□ -1.77
RIF1-203ENST00000428287 TWIST1Q15672 202 aa4□□□□□ -1.77
RIF1-203ENST00000428287 ZNF491Q8N8L2 437 aa4□□□□□ -1.77
RIF1-203ENST00000428287 ZNHIT1O43257 154 aa4□□□□□ -1.77
RIF1-203ENST00000428287 A0A087WX48 190 aa4□□□□□ -1.77
RIF1-203ENST00000428287 GAGE12JA6NER3 117 aa4□□□□□ -1.77
RIF1-203ENST00000428287 K7ESF4 209 aa4□□□□□ -1.77
RIF1-203ENST00000428287 GAGE7O76087 117 aa4□□□□□ -1.77
RIF1-203ENST00000428287 GAGE12FP0CL80 117 aa4□□□□□ -1.77
RIF1-203ENST00000428287 GAGE12GP0CL81 117 aa4□□□□□ -1.77
RIF1-203ENST00000428287 GAGE12IP0CL82 117 aa4□□□□□ -1.77
RIF1-203ENST00000428287 EGR2P11161 476 aaPredicted RBP4□□□□□ -1.77
RIF1-203ENST00000428287 GAGE4Q13068 117 aa4□□□□□ -1.77
RIF1-203ENST00000428287 IL17RELQ6ZVW7 336 aa4□□□□□ -1.77
RIF1-203ENST00000428287 Q71RC1 249 aaPredicted RBP4□□□□□ -1.77
RIF1-203ENST00000428287 NGBQ9NPG2 151 aa4□□□□□ -1.77
RIF1-203ENST00000428287 F11RQ9Y624 299 aaKnown RBP4□□□□□ -1.77
RIF1-203ENST00000428287 MAST4O15021 2626 aa4□□□□□ -1.77
RIF1-203ENST00000428287 IGKCP01834 107 aa4□□□□□ -1.77
RIF1-203ENST00000428287 RUSC1-AS1Q66K80 236 aa4□□□□□ -1.77
RIF1-203ENST00000428287 KAAG1Q9UBP8 84 aa4□□□□□ -1.77
RIF1-203ENST00000428287 K7EIM0 57 aa4□□□□□ -1.77
RIF1-203ENST00000428287 IGLV1-47P01700 117 aa4□□□□□ -1.77
RIF1-203ENST00000428287 ORM2P19652 201 aa4□□□□□ -1.77
RIF1-203ENST00000428287 NDUFV3P56181 108 aaKnown RBP4□□□□□ -1.77
RIF1-203ENST00000428287 MAP1LC3AQ9H492 121 aa4□□□□□ -1.77
RIF1-203ENST00000428287 IGFLR1Q9H665 355 aa4□□□□□ -1.77
RIF1-203ENST00000428287 FSCN3Q9NQT6 498 aa4□□□□□ -1.77
RIF1-203ENST00000428287 TNFRSF18Q9Y5U5 241 aa4□□□□□ -1.77
RIF1-203ENST00000428287 IGHV3-64DA0A0J9YX35 117 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 PLAUP00749 431 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 IGHV3-48P01763 117 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 TCTAP57738 103 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 C10orf55Q5SWW7 151 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 SLC25A29Q8N8R3 303 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 SHANK2-AS3Q9BTD1 123 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 RPL13AP40429 203 aaKnown RBP3.99□□□□□ -1.77
RIF1-203ENST00000428287 FOLR3P41439 243 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 PRR31Q5SQ13 230 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 MGAM2Q2M2H8 2515 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 RBP4P02753 201 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 ZFAND6Q6FIF0 208 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 IGFBPL1Q8WX77 278 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 SIGLEC9Q9Y336 463 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 TENM3Q9P273 2699 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 IGLV2-23P01705 113 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 LYRM7Q5U5X0 104 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 LYZL1Q6UWQ5 148 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 ZFP2Q6ZN57 461 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 SDIM1Q6ZPB5 146 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 TTTY12Q9BZ98 90 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 CXorf67Q86X51 503 aaPredicted RBP3.99□□□□□ -1.77
RIF1-203ENST00000428287 LEAP2Q969E1 77 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 LINC01549A6NIU2 74 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 FABP5P3A8MUU1 101 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 I3L2K1 104 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 UFC1Q9Y3C8 167 aa3.99□□□□□ -1.77
RIF1-203ENST00000428287 FLNBO75369 2602 aaKnown RBP3.99□□□□□ -1.77
RIF1-203ENST00000428287 BRI3O95415 125 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 PPP1R27Q86WC6 154 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 IMUPQ9GZP8 106 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 CXCL12P48061 93 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 RBMXL3Q8N7X1 1067 aaKnown RBP3.98□□□□□ -1.77
RIF1-203ENST00000428287 TFF1P04155 84 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 KLK9Q2XQG4 91 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 TM4SF20Q53R12 229 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 RASL10AQ92737 203 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 KLK9Q9UKQ9 250 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 IGHV4OR15-8A0A075B7B6 117 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 IGHV3OR15-7A0A075B7D8 119 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 A0A087WW49 117 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 TRGV5A0A0B4J1U4 118 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 A0A0J9YY99 117 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 TMEM213A2RRL7 107 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 TEX22C9J3V5 150 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 TNFRSF6BO95407 300 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 PRNTQ86SH4 94 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 TEX29Q8N6K0 151 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 MDFICQ9P1T7 246 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 SLC25A15Q9Y619 301 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 FAM90A27PA6NNH2 459 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 B5MCH6 92 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 F8W735 103 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms