RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 LINC00467Q9BRT7 94 aa12.8□□□□□ -0.36
HERC3-205ENST00000426683 MAP1LC3BQ9GZQ8 125 aa12.8□□□□□ -0.36
HERC3-205ENST00000426683 LENEPQ9Y5L5 61 aa12.8□□□□□ -0.36
HERC3-205ENST00000426683 HYDINQ4G0P3 5121 aa12.79□□□□□ -0.36
HERC3-205ENST00000426683 TRAV8-1A0A0A6YYK1 113 aa12.79□□□□□ -0.36
HERC3-205ENST00000426683 SERTM2A0A1B0GWG4 89 aa12.79□□□□□ -0.36
HERC3-205ENST00000426683 CBY3A6NI87 242 aa12.79□□□□□ -0.36
HERC3-205ENST00000426683 SNURFLB1AK76 121 aa12.79□□□□□ -0.36
HERC3-205ENST00000426683 TCRAP04437 139 aa12.79□□□□□ -0.36
HERC3-205ENST00000426683 FHITP49789 147 aa12.79□□□□□ -0.36
HERC3-205ENST00000426683 UBE2G2P60604 165 aa12.79□□□□□ -0.36
HERC3-205ENST00000426683 EIF4E3Q8N5X7 224 aaKnown RBP12.79□□□□□ -0.36
HERC3-205ENST00000426683 A0A1W2PRE2 83 aa12.78□□□□□ -0.36
HERC3-205ENST00000426683 UMAD1C9J7I0 102 aa12.78□□□□□ -0.36
HERC3-205ENST00000426683 RGS13O14921 159 aa12.78□□□□□ -0.36
HERC3-205ENST00000426683 C1QBP02746 253 aa12.78□□□□□ -0.36
HERC3-205ENST00000426683 TPT1P13693 172 aaKnown RBP12.78□□□□□ -0.36
HERC3-205ENST00000426683 LGALSLQ3ZCW2 172 aaPredicted RBP12.78□□□□□ -0.36
HERC3-205ENST00000426683 AKAP14Q86UN6 197 aa12.78□□□□□ -0.36
HERC3-205ENST00000426683 SGK494Q96LW2 274 aa12.78□□□□□ -0.36
HERC3-205ENST00000426683 EPDR1Q9UM22 224 aa12.78□□□□□ -0.36
HERC3-205ENST00000426683 IGHV1OR15-1A0A075B7D0 117 aa12.77□□□□□ -0.37
HERC3-205ENST00000426683 K7EQM0 130 aa12.77□□□□□ -0.37
HERC3-205ENST00000426683 ANXA2RQ3ZCQ2 193 aa12.77□□□□□ -0.37
HERC3-205ENST00000426683 ZNF680Q8NEM1 530 aa12.77□□□□□ -0.37
HERC3-205ENST00000426683 STOML3Q8TAV4 291 aa12.77□□□□□ -0.37
HERC3-205ENST00000426683 FAM213BQ8TBF2 198 aa12.77□□□□□ -0.37
HERC3-205ENST00000426683 Q6AWC8 147 aa12.76□□□□□ -0.37
HERC3-205ENST00000426683 LGALS9CQ6DKI2 356 aa12.76□□□□□ -0.37
HERC3-205ENST00000426683 TVP23CQ96ET8 276 aa12.76□□□□□ -0.37
HERC3-205ENST00000426683 NDUFAF3Q9BU61 184 aa12.76□□□□□ -0.37
HERC3-205ENST00000426683 TREM1Q9NP99 234 aa12.76□□□□□ -0.37
HERC3-205ENST00000426683 GSN-AS1Q9NRJ2 163 aa12.76□□□□□ -0.37
HERC3-205ENST00000426683 TP53TG3Q9ULZ0 132 aa12.76□□□□□ -0.37
HERC3-205ENST00000426683 FAM74A7A6NL05 159 aa12.75□□□□□ -0.37
HERC3-205ENST00000426683 F6UZH7 168 aa12.75□□□□□ -0.37
HERC3-205ENST00000426683 MUC21Q5SSG8 566 aa12.75□□□□□ -0.37
HERC3-205ENST00000426683 CYB561D1Q8N8Q1 229 aa12.75□□□□□ -0.37
HERC3-205ENST00000426683 C11orf72Q8NBR9 251 aa12.75□□□□□ -0.37
HERC3-205ENST00000426683 ATG101Q9BSB4 218 aa12.75□□□□□ -0.37
HERC3-205ENST00000426683 PSG8Q9UQ74 426 aa12.75□□□□□ -0.37
HERC3-205ENST00000426683 GAGE12BA1L429 117 aa12.74□□□□□ -0.37
HERC3-205ENST00000426683 GAGE7O76087 117 aa12.74□□□□□ -0.37
HERC3-205ENST00000426683 IFNA7P01567 189 aa12.74□□□□□ -0.37
HERC3-205ENST00000426683 ATP5G1P05496 136 aa12.74□□□□□ -0.37
HERC3-205ENST00000426683 GAGE12FP0CL80 117 aa12.74□□□□□ -0.37
HERC3-205ENST00000426683 GAGE12GP0CL81 117 aa12.74□□□□□ -0.37
HERC3-205ENST00000426683 GAGE12IP0CL82 117 aa12.74□□□□□ -0.37
HERC3-205ENST00000426683 ATP5G3P48201 142 aa12.74□□□□□ -0.37
HERC3-205ENST00000426683 DAZ2Q13117 558 aaKnown RBP12.74□□□□□ -0.37
HERC3-205ENST00000426683 DPPA3Q6W0C5 159 aa12.74□□□□□ -0.37
HERC3-205ENST00000426683 LINC00612Q8N6U2 182 aa12.74□□□□□ -0.37
HERC3-205ENST00000426683 SFT2D1Q8WV19 159 aa12.74□□□□□ -0.37
HERC3-205ENST00000426683 MBD3L1Q8WWY6 194 aa12.74□□□□□ -0.37
HERC3-205ENST00000426683 FAM210BQ96KR6 192 aa12.74□□□□□ -0.37
HERC3-205ENST00000426683 NDFIP1Q9BT67 221 aa12.74□□□□□ -0.37
HERC3-205ENST00000426683 IGLV2-11P01706 119 aa12.73□□□□□ -0.37
HERC3-205ENST00000426683 FLI1Q01543 452 aaPredicted RBP12.73□□□□□ -0.37
HERC3-205ENST00000426683 IBA57Q5T440 356 aaKnown RBP12.73□□□□□ -0.37
HERC3-205ENST00000426683 PRNTQ86SH4 94 aa12.73□□□□□ -0.37
HERC3-205ENST00000426683 TMEM75Q8N9X5 138 aa12.73□□□□□ -0.37
HERC3-205ENST00000426683 NKX6-2Q9C056 277 aaPredicted RBP12.73□□□□□ -0.37
HERC3-205ENST00000426683 KLF12Q9Y4X4 402 aa12.73□□□□□ -0.37
HERC3-205ENST00000426683 A0A1B0GV50 99 aa12.72□□□□□ -0.37
HERC3-205ENST00000426683 F5H768 121 aa12.72□□□□□ -0.37
HERC3-205ENST00000426683 TCL1AP56279 114 aa12.72□□□□□ -0.37
HERC3-205ENST00000426683 TMEM88Q6PEY1 159 aa12.72□□□□□ -0.37
HERC3-205ENST00000426683 FAM159AQ6UWV7 190 aa12.72□□□□□ -0.37
HERC3-205ENST00000426683 Q6ZTI0 123 aa12.72□□□□□ -0.37
HERC3-205ENST00000426683 NAGKQ9UJ70 344 aa12.72□□□□□ -0.37
HERC3-205ENST00000426683 TRAV21A0A0B4J279 112 aa12.71□□□□□ -0.37
HERC3-205ENST00000426683 A0A1B0GVG6 124 aa12.71□□□□□ -0.37
HERC3-205ENST00000426683 FBLL1A6NHQ2 334 aaKnown RBP12.71□□□□□ -0.37
HERC3-205ENST00000426683 PEX7O00628 323 aa12.71□□□□□ -0.37
HERC3-205ENST00000426683 H2AFB1P0C5Y9 115 aa12.71□□□□□ -0.37
HERC3-205ENST00000426683 EIF5AL1Q6IS14 154 aaKnown RBP12.71□□□□□ -0.37
HERC3-205ENST00000426683 LINC00479Q96M42 142 aa12.71□□□□□ -0.37
HERC3-205ENST00000426683 C8orf49Q96NF6 230 aa12.71□□□□□ -0.37
HERC3-205ENST00000426683 TRGV1A0A0A0MS02 117 aa12.7□□□□□ -0.38
HERC3-205ENST00000426683 TRAV34A0A0B4J273 112 aa12.7□□□□□ -0.38
HERC3-205ENST00000426683 ZNF415Q09FC8 603 aa12.7□□□□□ -0.38
HERC3-205ENST00000426683 CST9LP1Q5W188 147 aa12.7□□□□□ -0.38
HERC3-205ENST00000426683 SLC51BQ86UW2 128 aa12.7□□□□□ -0.38
HERC3-205ENST00000426683 HIST1H2BAQ96A08 127 aa12.7□□□□□ -0.38
HERC3-205ENST00000426683 TRGV11A0A075B6L2 103 aa12.69□□□□□ -0.38
HERC3-205ENST00000426683 SPINK4O60575 86 aa12.69□□□□□ -0.38
HERC3-205ENST00000426683 PAGE4O60829 102 aa12.69□□□□□ -0.38
HERC3-205ENST00000426683 PPT1P50897 306 aa12.69□□□□□ -0.38
HERC3-205ENST00000426683 ZNF80P51504 273 aaPredicted RBP12.69□□□□□ -0.38
HERC3-205ENST00000426683 TMEM183BQ1AE95 376 aa12.69□□□□□ -0.38
HERC3-205ENST00000426683 ZFP69Q49AA0 526 aa12.69□□□□□ -0.38
HERC3-205ENST00000426683 SAPCD1Q5SSQ6 148 aa12.69□□□□□ -0.38
HERC3-205ENST00000426683 TMEM183AQ8IXX5 376 aa12.69□□□□□ -0.38
HERC3-205ENST00000426683 C9orf62Q8N4C0 152 aa12.69□□□□□ -0.38
HERC3-205ENST00000426683 ARL2-SNX15V9GYD0 113 aa12.69□□□□□ -0.38
HERC3-205ENST00000426683 TRGV2A0A075B6R0 118 aa12.68□□□□□ -0.38
HERC3-205ENST00000426683 GCGP01275 180 aa12.68□□□□□ -0.38
HERC3-205ENST00000426683 RAB5CP51148 216 aa12.68□□□□□ -0.38
HERC3-205ENST00000426683 TDRG1Q3Y452 100 aa12.68□□□□□ -0.38
HERC3-205ENST00000426683 SMUG1Q53HV7 270 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms