RNA–Protein interactions for RNA: ENST00000426635.6

LINC00472-203, long intergenic non-protein coding RNA 472, humanhuman

TSL 2 BASIC

Gene LINC00472, Length 2,958 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-203ENST00000426635 TRGV3P03979 118 aa13.2□□□□□ -0.3
LINC00472-203ENST00000426635 C15orf53Q8NAA6 179 aa13.2□□□□□ -0.3
LINC00472-203ENST00000426635 NTN5Q8WTR8 489 aaPredicted RBP13.2□□□□□ -0.3
LINC00472-203ENST00000426635 TM4SF5O14894 197 aa13.2□□□□□ -0.3
LINC00472-203ENST00000426635 LINC00574Q9H8X3 128 aa13.2□□□□□ -0.3
LINC00472-203ENST00000426635 TRGV5A0A0B4J1U4 118 aa13.2□□□□□ -0.3
LINC00472-203ENST00000426635 RNF7Q9UBF6 113 aa13.2□□□□□ -0.3
LINC00472-203ENST00000426635 S4R3C0 116 aa13.19□□□□□ -0.3
LINC00472-203ENST00000426635 CEACAM4O75871 244 aa13.19□□□□□ -0.3
LINC00472-203ENST00000426635 ATP5J2P56134 94 aa13.19□□□□□ -0.3
LINC00472-203ENST00000426635 PVRIGQ6DKI7 326 aa13.19□□□□□ -0.3
LINC00472-203ENST00000426635 MRPS12O15235 138 aaKnown RBP13.18□□□□□ -0.3
LINC00472-203ENST00000426635 CFC1BP0CG36 223 aa13.18□□□□□ -0.3
LINC00472-203ENST00000426635 CFC1P0CG37 223 aa13.18□□□□□ -0.3
LINC00472-203ENST00000426635 IGFBP4P22692 258 aa13.18□□□□□ -0.3
LINC00472-203ENST00000426635 TMEM155Q4W5P6 130 aa13.18□□□□□ -0.3
LINC00472-203ENST00000426635 Q8N1Y9 231 aa13.18□□□□□ -0.3
LINC00472-203ENST00000426635 SCGB3A1Q96QR1 104 aa13.18□□□□□ -0.3
LINC00472-203ENST00000426635 RASL10AQ92737 203 aa13.18□□□□□ -0.3
LINC00472-203ENST00000426635 RNF125Q96EQ8 232 aa13.18□□□□□ -0.3
LINC00472-203ENST00000426635 H7C2G1 150 aa13.17□□□□□ -0.3
LINC00472-203ENST00000426635 DMDP11532 3685 aa13.17□□□□□ -0.3
LINC00472-203ENST00000426635 ZNF491Q8N8L2 437 aa13.17□□□□□ -0.3
LINC00472-203ENST00000426635 ODF3Q96PU9 254 aa13.17□□□□□ -0.3
LINC00472-203ENST00000426635 KALRNO60229 2985 aa13.17□□□□□ -0.3
LINC00472-203ENST00000426635 Q6Q795 121 aa13.17□□□□□ -0.3
LINC00472-203ENST00000426635 C10orf126Q8N4M7 172 aa13.17□□□□□ -0.3
LINC00472-203ENST00000426635 NRACQ8N912 160 aa13.17□□□□□ -0.3
LINC00472-203ENST00000426635 TRAV12-1A0A0B4J245 112 aa13.16□□□□□ -0.3
LINC00472-203ENST00000426635 CHCHD5Q9BSY4 110 aa13.16□□□□□ -0.3
LINC00472-203ENST00000426635 TRAV8-4A0A0B4J246 113 aa13.16□□□□□ -0.3
LINC00472-203ENST00000426635 I3L2K1 104 aa13.16□□□□□ -0.3
LINC00472-203ENST00000426635 CD40P25942 277 aa13.16□□□□□ -0.3
LINC00472-203ENST00000426635 HLA-DMBP28068 263 aa13.16□□□□□ -0.3
LINC00472-203ENST00000426635 TDHQ8IZJ6 230 aa13.16□□□□□ -0.3
LINC00472-203ENST00000426635 OR10J6PQ8NGY7 276 aa13.16□□□□□ -0.3
LINC00472-203ENST00000426635 CNFNQ9BYD5 112 aa13.16□□□□□ -0.3
LINC00472-203ENST00000426635 MALRD1Q5VYJ5 2156 aa13.15□□□□□ -0.3
LINC00472-203ENST00000426635 TEX49A0A1B0GTD5 131 aa13.15□□□□□ -0.3
LINC00472-203ENST00000426635 WT1P19544 449 aaPredicted RBP13.15□□□□□ -0.3
LINC00472-203ENST00000426635 TMEM30BQ3MIR4 351 aa13.15□□□□□ -0.3
LINC00472-203ENST00000426635 ROS1P08922 2347 aa13.15□□□□□ -0.3
LINC00472-203ENST00000426635 Q6ZS46 218 aa13.14□□□□□ -0.31
LINC00472-203ENST00000426635 PRO1854Q9UHT4 67 aa13.14□□□□□ -0.31
LINC00472-203ENST00000426635 NEXN-AS1Q8NBZ9 246 aa13.14□□□□□ -0.31
LINC00472-203ENST00000426635 IGLV1-44P01699 117 aa13.14□□□□□ -0.31
LINC00472-203ENST00000426635 COX6B1P14854 86 aa13.14□□□□□ -0.31
LINC00472-203ENST00000426635 FAM57AQ8TBR7 257 aa13.14□□□□□ -0.31
LINC00472-203ENST00000426635 TNFAIP6P98066 277 aaPredicted RBP13.13□□□□□ -0.31
LINC00472-203ENST00000426635 TMEM200BQ69YZ2 307 aa13.13□□□□□ -0.31
LINC00472-203ENST00000426635 SMG1Q96Q15 3661 aaKnown RBP13.13□□□□□ -0.31
LINC00472-203ENST00000426635 A0A0J9YY99 117 aa13.13□□□□□ -0.31
LINC00472-203ENST00000426635 TEX22C9J3V5 150 aa13.13□□□□□ -0.31
LINC00472-203ENST00000426635 NTN3O00634 580 aaPredicted RBP13.13□□□□□ -0.31
LINC00472-203ENST00000426635 EMP1P54849 157 aa13.13□□□□□ -0.31
LINC00472-203ENST00000426635 PRB3Q04118 309 aaPredicted RBP13.12□□□□□ -0.31
LINC00472-203ENST00000426635 ERCC8Q13216 396 aa13.12□□□□□ -0.31
LINC00472-203ENST00000426635 PRR30Q53SZ7 412 aaPredicted RBP13.12□□□□□ -0.31
LINC00472-203ENST00000426635 RAB1BQ9H0U4 201 aa13.12□□□□□ -0.31
LINC00472-203ENST00000426635 MDFICQ9P1T7 246 aa13.12□□□□□ -0.31
LINC00472-203ENST00000426635 TRAV2A0A0B4J234 112 aa13.12□□□□□ -0.31
LINC00472-203ENST00000426635 PDE6HQ13956 83 aa13.12□□□□□ -0.31
LINC00472-203ENST00000426635 COX8CQ7Z4L0 72 aa13.12□□□□□ -0.31
LINC00472-203ENST00000426635 SIGLEC9Q9Y336 463 aa13.12□□□□□ -0.31
LINC00472-203ENST00000426635 J3KRW8 73 aa13.11□□□□□ -0.31
LINC00472-203ENST00000426635 M0R1B8 84 aa13.11□□□□□ -0.31
LINC00472-203ENST00000426635 FOXC1Q12948 553 aa13.11□□□□□ -0.31
LINC00472-203ENST00000426635 CFIP05156 583 aa13.11□□□□□ -0.31
LINC00472-203ENST00000426635 RPL7P18124 248 aaKnown RBP13.11□□□□□ -0.31
LINC00472-203ENST00000426635 BAALCQ8WXS3 180 aa13.11□□□□□ -0.31
LINC00472-203ENST00000426635 TMEM190Q8WZ59 177 aa13.11□□□□□ -0.31
LINC00472-203ENST00000426635 CFHR4Q92496 578 aa13.11□□□□□ -0.31
LINC00472-203ENST00000426635 IGHV3-30P01768 117 aa13.11□□□□□ -0.31
LINC00472-203ENST00000426635 IGHV4-39P01824 125 aa13.11□□□□□ -0.31
LINC00472-203ENST00000426635 IGHV3-30-5P0DP03 117 aa13.11□□□□□ -0.31
LINC00472-203ENST00000426635 C21orf62Q9NYP8 219 aa13.11□□□□□ -0.31
LINC00472-203ENST00000426635 DLX1P56177 255 aa13.1□□□□□ -0.31
LINC00472-203ENST00000426635 PSMG3-AS1Q96PY0 264 aa13.1□□□□□ -0.31
LINC00472-203ENST00000426635 TMEM126AQ9H061 195 aa13.1□□□□□ -0.31
LINC00472-203ENST00000426635 SPANXA1Q9NS26 97 aa13.1□□□□□ -0.31
LINC00472-203ENST00000426635 ZZEF1O43149 2961 aa13.1□□□□□ -0.31
LINC00472-203ENST00000426635 K7EIM0 57 aa13.09□□□□□ -0.31
LINC00472-203ENST00000426635 SMIM2Q9BVW6 85 aa13.09□□□□□ -0.31
LINC00472-203ENST00000426635 ASPMQ8IZT6 3477 aa13.09□□□□□ -0.31
LINC00472-203ENST00000426635 ELANEP08246 267 aa13.09□□□□□ -0.31
LINC00472-203ENST00000426635 LINC01587Q99440 93 aa13.09□□□□□ -0.31
LINC00472-203ENST00000426635 BEX4Q9NWD9 120 aaPredicted RBP13.09□□□□□ -0.31
LINC00472-203ENST00000426635 CSDC2Q9Y534 153 aaKnown RBP13.09□□□□□ -0.31
LINC00472-203ENST00000426635 TPRP12270 2363 aaKnown RBP13.08□□□□□ -0.31
LINC00472-203ENST00000426635 IGHV1-46P01743 117 aa13.08□□□□□ -0.32
LINC00472-203ENST00000426635 LINC00694P0DN24 101 aa13.08□□□□□ -0.32
LINC00472-203ENST00000426635 C9orf106Q8NAJ2 232 aa13.08□□□□□ -0.32
LINC00472-203ENST00000426635 TOMM6Q96B49 74 aa13.08□□□□□ -0.32
LINC00472-203ENST00000426635 IGKV3D-20A0A0C4DH25 116 aa13.08□□□□□ -0.32
LINC00472-203ENST00000426635 ZNF56Q15929 161 aa13.08□□□□□ -0.32
LINC00472-203ENST00000426635 DKK4Q9UBT3 224 aa13.08□□□□□ -0.32
LINC00472-203ENST00000426635 LOC107984640A0A0U1RRK4 108 aa13.07□□□□□ -0.32
LINC00472-203ENST00000426635 TCF15Q12870 199 aa13.07□□□□□ -0.32
LINC00472-203ENST00000426635 Q1RN00 199 aa13.07□□□□□ -0.32
LINC00472-203ENST00000426635 MDS2Q8NDY4 140 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms