RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 MPV17L2Q567V2 206 aa6.26□□□□□ -1.41
CTNND1-207ENST00000426142 FAM104BQ5XKR9 115 aa6.26□□□□□ -1.41
CTNND1-207ENST00000426142 ELANEP08246 267 aa6.25□□□□□ -1.41
CTNND1-207ENST00000426142 PCP4P48539 62 aa6.25□□□□□ -1.41
CTNND1-207ENST00000426142 RNASE13Q5GAN3 156 aaKnown RBP6.25□□□□□ -1.41
CTNND1-207ENST00000426142 C2orf66Q6UXQ4 117 aa6.25□□□□□ -1.41
CTNND1-207ENST00000426142 APRG1Q8IVJ8 170 aa6.25□□□□□ -1.41
CTNND1-207ENST00000426142 FXYD5Q96DB9 178 aa6.25□□□□□ -1.41
CTNND1-207ENST00000426142 A0A0J9YY99 117 aa6.25□□□□□ -1.41
CTNND1-207ENST00000426142 SDHAF1A6NFY7 115 aa6.25□□□□□ -1.41
CTNND1-207ENST00000426142 CCL24O00175 119 aa6.25□□□□□ -1.41
CTNND1-207ENST00000426142 CHAC1Q9BUX1 264 aa6.25□□□□□ -1.41
CTNND1-207ENST00000426142 TSSC4Q9Y5U2 329 aaPredicted RBP6.25□□□□□ -1.41
CTNND1-207ENST00000426142 C2orf16Q68DN1 1984 aa6.25□□□□□ -1.41
CTNND1-207ENST00000426142 TRAV8-3A0A0A6YYJ7 113 aa6.25□□□□□ -1.41
CTNND1-207ENST00000426142 GTF3C1Q12789 2109 aa6.25□□□□□ -1.41
CTNND1-207ENST00000426142 RHODO00212 210 aa6.25□□□□□ -1.41
CTNND1-207ENST00000426142 BLCAPP62952 87 aa6.25□□□□□ -1.41
CTNND1-207ENST00000426142 ZNF491Q8N8L2 437 aa6.25□□□□□ -1.41
CTNND1-207ENST00000426142 CENPVL3A0A0U1RRI6 287 aa6.24□□□□□ -1.41
CTNND1-207ENST00000426142 IGLV2-23P01705 113 aa6.24□□□□□ -1.41
CTNND1-207ENST00000426142 THAP8Q8NA92 274 aa6.24□□□□□ -1.41
CTNND1-207ENST00000426142 TMEM14CQ9P0S9 112 aa6.24□□□□□ -1.41
CTNND1-207ENST00000426142 PLXNB3Q9ULL4 1909 aa6.24□□□□□ -1.41
CTNND1-207ENST00000426142 IGLC7A0M8Q6 106 aa6.24□□□□□ -1.41
CTNND1-207ENST00000426142 GNRH2O43555 120 aa6.24□□□□□ -1.41
CTNND1-207ENST00000426142 C18orf32Q8TCD1 76 aa6.24□□□□□ -1.41
CTNND1-207ENST00000426142 NOP10Q9NPE3 64 aaKnown RBP6.24□□□□□ -1.41
CTNND1-207ENST00000426142 SLAQ13239 276 aa6.24□□□□□ -1.41
CTNND1-207ENST00000426142 PMVKQ15126 192 aa6.24□□□□□ -1.41
CTNND1-207ENST00000426142 CACNA1HO95180 2353 aa6.24□□□□□ -1.41
CTNND1-207ENST00000426142 DYNAPQ8N1N2 210 aa6.24□□□□□ -1.41
CTNND1-207ENST00000426142 NXPH4O95158 308 aa6.24□□□□□ -1.41
CTNND1-207ENST00000426142 PYY3Q5JQD4 70 aa6.24□□□□□ -1.41
CTNND1-207ENST00000426142 Q8N8P6 123 aa6.24□□□□□ -1.41
CTNND1-207ENST00000426142 V9GYV3 84 aa6.24□□□□□ -1.41
CTNND1-207ENST00000426142 HLA-DRB4P13762 266 aa6.23□□□□□ -1.41
CTNND1-207ENST00000426142 RPL32P62910 135 aaKnown RBP6.23□□□□□ -1.41
CTNND1-207ENST00000426142 FOXE3Q13461 319 aa6.23□□□□□ -1.41
CTNND1-207ENST00000426142 TMEM243Q9BU79 118 aa6.23□□□□□ -1.41
CTNND1-207ENST00000426142 HLA-DRB4X5D2U9 266 aa6.23□□□□□ -1.41
CTNND1-207ENST00000426142 DOCK11Q5JSL3 2073 aa6.23□□□□□ -1.41
CTNND1-207ENST00000426142 ABCA1O95477 2261 aa6.23□□□□□ -1.41
CTNND1-207ENST00000426142 SEM1Q6ZVN7 128 aa6.23□□□□□ -1.41
CTNND1-207ENST00000426142 COL4A3Q01955 1670 aa6.23□□□□□ -1.41
CTNND1-207ENST00000426142 F8WEM9 126 aa6.23□□□□□ -1.41
CTNND1-207ENST00000426142 HIST1H4AP62805 103 aaKnown RBP6.23□□□□□ -1.41
CTNND1-207ENST00000426142 KIR3DS1Q14943 382 aa6.23□□□□□ -1.41
CTNND1-207ENST00000426142 IGF2-ASQ6U949 168 aa6.23□□□□□ -1.41
CTNND1-207ENST00000426142 EDA2RQ9HAV5 297 aa6.23□□□□□ -1.41
CTNND1-207ENST00000426142 VWC2Q2TAL6 325 aa6.23□□□□□ -1.41
CTNND1-207ENST00000426142 C2orf82Q6UX34 121 aa6.23□□□□□ -1.41
CTNND1-207ENST00000426142 OR11H6Q8NGC7 330 aa6.23□□□□□ -1.41
CTNND1-207ENST00000426142 PCNX2A6NKB5 2137 aa6.22□□□□□ -1.41
CTNND1-207ENST00000426142 LGALS1P09382 135 aaKnown RBP6.22□□□□□ -1.41
CTNND1-207ENST00000426142 ANGP03950 147 aaKnown RBP6.22□□□□□ -1.41
CTNND1-207ENST00000426142 SMIM27A0A1W2PRY6 76 aa6.22□□□□□ -1.41
CTNND1-207ENST00000426142 NPYP01303 97 aa6.22□□□□□ -1.41
CTNND1-207ENST00000426142 CFHR4Q92496 578 aa6.22□□□□□ -1.41
CTNND1-207ENST00000426142 IGHV7-81A0A0B4J1V7 117 aa6.22□□□□□ -1.41
CTNND1-207ENST00000426142 CT83Q5H943 113 aa6.22□□□□□ -1.41
CTNND1-207ENST00000426142 TMEM141Q96I45 108 aa6.22□□□□□ -1.41
CTNND1-207ENST00000426142 ZFP36P26651 326 aaKnown RBP6.21□□□□□ -1.41
CTNND1-207ENST00000426142 ZNF664Q8N3J9 261 aa6.21□□□□□ -1.41
CTNND1-207ENST00000426142 C10orf105Q8TEF2 133 aa6.21□□□□□ -1.41
CTNND1-207ENST00000426142 KMT2EQ8IZD2 1858 aa6.21□□□□□ -1.41
CTNND1-207ENST00000426142 SIGLEC8Q9NYZ4 499 aa6.21□□□□□ -1.42
CTNND1-207ENST00000426142 U3KQE9 123 aa6.21□□□□□ -1.42
CTNND1-207ENST00000426142 FAM231BA6NCW3 169 aa6.21□□□□□ -1.42
CTNND1-207ENST00000426142 H3BUA1 57 aa6.21□□□□□ -1.42
CTNND1-207ENST00000426142 Q0VG73 95 aa6.21□□□□□ -1.42
CTNND1-207ENST00000426142 FOXI2Q6ZQN5 318 aa6.21□□□□□ -1.42
CTNND1-207ENST00000426142 Q6ZQT7 251 aa6.21□□□□□ -1.42
CTNND1-207ENST00000426142 IGHV1-24A0A0C4DH33 117 aa6.21□□□□□ -1.42
CTNND1-207ENST00000426142 SPINK8P0C7L1 97 aa6.21□□□□□ -1.42
CTNND1-207ENST00000426142 KRTAP27-1Q3LI81 207 aa6.21□□□□□ -1.42
CTNND1-207ENST00000426142 C8orf31Q8N9H6 132 aa6.21□□□□□ -1.42
CTNND1-207ENST00000426142 MRPL53Q96EL3 112 aaKnown RBP6.21□□□□□ -1.42
CTNND1-207ENST00000426142 AJUBAQ96IF1 538 aa6.21□□□□□ -1.42
CTNND1-207ENST00000426142 K7EN84 100 aa6.21□□□□□ -1.42
CTNND1-207ENST00000426142 PRR20EP86478 221 aa6.21□□□□□ -1.42
CTNND1-207ENST00000426142 PRR20CP86479 221 aa6.21□□□□□ -1.42
CTNND1-207ENST00000426142 PRR20DP86480 221 aa6.21□□□□□ -1.42
CTNND1-207ENST00000426142 PRR20BP86481 221 aa6.21□□□□□ -1.42
CTNND1-207ENST00000426142 PRR20AP86496 221 aa6.21□□□□□ -1.42
CTNND1-207ENST00000426142 NKAPP1Q8N9T2 125 aa6.21□□□□□ -1.42
CTNND1-207ENST00000426142 RNF138Q8WVD3 245 aa6.21□□□□□ -1.42
CTNND1-207ENST00000426142 AGPAT4-IT1Q9H0P7 198 aa6.21□□□□□ -1.42
CTNND1-207ENST00000426142 POU2AF1Q16633 256 aa6.2□□□□□ -1.42
CTNND1-207ENST00000426142 ATP6V0BQ99437 205 aa6.2□□□□□ -1.42
CTNND1-207ENST00000426142 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.2□□□□□ -1.429e-7■■■□□ 18
CTNND1-207ENST00000426142 MTURNQ8N3F0 131 aa6.2□□□□□ -1.42
CTNND1-207ENST00000426142 A8MWP6 167 aa6.2□□□□□ -1.42
CTNND1-207ENST00000426142 LTAP01374 205 aa6.2□□□□□ -1.42
CTNND1-207ENST00000426142 EGR2P11161 476 aaPredicted RBP6.2□□□□□ -1.42
CTNND1-207ENST00000426142 SPAG8Q99932 426 aaPredicted RBP6.2□□□□□ -1.42
CTNND1-207ENST00000426142 KLF2Q9Y5W3 355 aaPredicted RBP6.2□□□□□ -1.42
CTNND1-207ENST00000426142 MALRD1Q5VYJ5 2156 aa6.2□□□□□ -1.42
CTNND1-207ENST00000426142 POLR3KQ9Y2Y1 108 aaPredicted RBP6.2□□□□□ -1.42
CTNND1-207ENST00000426142 NCKAP5O14513 1909 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms