RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 PRNTQ86SH4 94 aa17.61■□□□□ 0.41
VEGFA-209ENST00000425836 LYPD6BQ8NI32 183 aa17.61■□□□□ 0.41
VEGFA-209ENST00000425836 TREM1Q9NP99 234 aa17.61■□□□□ 0.41
VEGFA-209ENST00000425836 HTN1P15515 57 aa17.6■□□□□ 0.41
VEGFA-209ENST00000425836 AZU1P20160 251 aa17.6■□□□□ 0.41
VEGFA-209ENST00000425836 LOC102723971A0A1B0GUV8 181 aa17.59■□□□□ 0.41
VEGFA-209ENST00000425836 ZNF680Q8NEM1 530 aa17.59■□□□□ 0.41
VEGFA-209ENST00000425836 NDFIP1Q9BT67 221 aa17.59■□□□□ 0.41
VEGFA-209ENST00000425836 KLF12Q9Y4X4 402 aa17.59■□□□□ 0.41
VEGFA-209ENST00000425836 SCO2A0A1W2PP80 73 aa17.58■□□□□ 0.41
VEGFA-209ENST00000425836 IFNA1P01562 189 aa17.58■□□□□ 0.41
VEGFA-209ENST00000425836 IL17DQ8TAD2 202 aa17.58■□□□□ 0.41
VEGFA-209ENST00000425836 TMEM189A5PLL7 270 aa17.57■□□□□ 0.4
VEGFA-209ENST00000425836 EMP1P54849 157 aa17.57■□□□□ 0.4
VEGFA-209ENST00000425836 C8orf49Q96NF6 230 aa17.57■□□□□ 0.4
VEGFA-209ENST00000425836 PYGO2Q9BRQ0 406 aa17.57■□□□□ 0.4
VEGFA-209ENST00000425836 BCL2P10415 239 aa17.57■□□□□ 0.4
VEGFA-209ENST00000425836 SAPCD1Q5SSQ6 148 aa17.57■□□□□ 0.4
VEGFA-209ENST00000425836 Q6AWC8 147 aa17.57■□□□□ 0.4
VEGFA-209ENST00000425836 C2CD4CQ8TF44 421 aa17.57■□□□□ 0.4
VEGFA-209ENST00000425836 TXNDC17Q9BRA2 123 aa17.57■□□□□ 0.4
VEGFA-209ENST00000425836 AKR1C3P42330 323 aa17.56■□□□□ 0.4
VEGFA-209ENST00000425836 Q86TA4 180 aa17.56■□□□□ 0.4
VEGFA-209ENST00000425836 MUC7Q8TAX7 377 aa17.56■□□□□ 0.4
VEGFA-209ENST00000425836 FMC1Q96HJ9 113 aa17.56■□□□□ 0.4
VEGFA-209ENST00000425836 TMEM183BQ1AE95 376 aa17.55■□□□□ 0.4
VEGFA-209ENST00000425836 C11orf45Q8TAV5 145 aa17.55■□□□□ 0.4
VEGFA-209ENST00000425836 LINC00467Q9BRT7 94 aa17.55■□□□□ 0.4
VEGFA-209ENST00000425836 VAX2Q9UIW0 290 aa17.55■□□□□ 0.4
VEGFA-209ENST00000425836 TRBV6-1A0A0K0K1D8 114 aa17.54■□□□□ 0.4
VEGFA-209ENST00000425836 UBE2G1P62253 170 aa17.54■□□□□ 0.4
VEGFA-209ENST00000425836 MEF2BQ02080 365 aaPredicted RBP17.54■□□□□ 0.4
VEGFA-209ENST00000425836 CELA1Q9UNI1 258 aa17.54■□□□□ 0.4
VEGFA-209ENST00000425836 PLAC8L1A1L4L8 177 aa17.53■□□□□ 0.4
VEGFA-209ENST00000425836 TAGLN2P37802 199 aaKnown RBP17.53■□□□□ 0.4
VEGFA-209ENST00000425836 ZNF493Q6ZR52 646 aa17.53■□□□□ 0.4
VEGFA-209ENST00000425836 RNASE8Q8TDE3 154 aaKnown RBP17.53■□□□□ 0.4
VEGFA-209ENST00000425836 C11orf52Q96A22 123 aa17.53■□□□□ 0.4
VEGFA-209ENST00000425836 C16orf74Q96GX8 76 aa17.53■□□□□ 0.4
VEGFA-209ENST00000425836 RGS13O14921 159 aa17.53■□□□□ 0.4
VEGFA-209ENST00000425836 ZNF80P51504 273 aaPredicted RBP17.53■□□□□ 0.4
VEGFA-209ENST00000425836 SMUG1Q53HV7 270 aa17.53■□□□□ 0.4
VEGFA-209ENST00000425836 TMEM263Q8WUH6 116 aaKnown RBP17.53■□□□□ 0.4
VEGFA-209ENST00000425836 PCNPQ8WW12 178 aaKnown RBP17.53■□□□□ 0.4
VEGFA-209ENST00000425836 ZFP30Q9Y2G7 519 aa17.53■□□□□ 0.4
VEGFA-209ENST00000425836 IGHV1OR15-1A0A075B7D0 117 aa17.52■□□□□ 0.39
VEGFA-209ENST00000425836 TRAV21A0A0B4J279 112 aa17.52■□□□□ 0.39
VEGFA-209ENST00000425836 CXorf65A6NEN9 183 aa17.52■□□□□ 0.39
VEGFA-209ENST00000425836 NANOS2P60321 138 aaKnown RBP17.52■□□□□ 0.39
VEGFA-209ENST00000425836 EIF4E3Q8N5X7 224 aaKnown RBP17.52■□□□□ 0.39
VEGFA-209ENST00000425836 DKK2Q9UBU2 259 aa17.52■□□□□ 0.39
VEGFA-209ENST00000425836 GCGP01275 180 aa17.51■□□□□ 0.39
VEGFA-209ENST00000425836 LTAP01374 205 aa17.51■□□□□ 0.39
VEGFA-209ENST00000425836 S100A9P06702 114 aaKnown RBP17.51■□□□□ 0.39
VEGFA-209ENST00000425836 ANXA2RQ3ZCQ2 193 aa17.51■□□□□ 0.39
VEGFA-209ENST00000425836 MUC21Q5SSG8 566 aa17.51■□□□□ 0.39
VEGFA-209ENST00000425836 DNAH7Q8WXX0 4024 aa17.51■□□□□ 0.39
VEGFA-209ENST00000425836 RBFOX3A6NFN3 312 aa17.5■□□□□ 0.39
VEGFA-209ENST00000425836 CBY3A6NI87 242 aa17.5■□□□□ 0.39
VEGFA-209ENST00000425836 PDE6DO43924 150 aa17.5■□□□□ 0.39
VEGFA-209ENST00000425836 SPART-AS1P0CW21 52 aa17.5■□□□□ 0.39
VEGFA-209ENST00000425836 FAM222AQ5U5X8 452 aa17.5■□□□□ 0.39
VEGFA-209ENST00000425836 TP53TG3Q9ULZ0 132 aa17.5■□□□□ 0.39
VEGFA-209ENST00000425836 COX8CQ7Z4L0 72 aa17.49■□□□□ 0.39
VEGFA-209ENST00000425836 DERL1Q9BUN8 251 aa17.49■□□□□ 0.39
VEGFA-209ENST00000425836 PFN1P07737 140 aaKnown RBP17.48■□□□□ 0.39
VEGFA-209ENST00000425836 RPL35P42766 123 aaKnown RBP17.48■□□□□ 0.39
VEGFA-209ENST00000425836 C12orf74Q32Q52 190 aa17.48■□□□□ 0.39
VEGFA-209ENST00000425836 ZNF506Q5JVG8 444 aa17.48■□□□□ 0.39
VEGFA-209ENST00000425836 FAM159AQ6UWV7 190 aa17.48■□□□□ 0.39
VEGFA-209ENST00000425836 NAGKQ9UJ70 344 aa17.48■□□□□ 0.39
VEGFA-209ENST00000425836 C3orf84H3BNL1 204 aa17.47■□□□□ 0.39
VEGFA-209ENST00000425836 ZFAND6Q6FIF0 208 aa17.47■□□□□ 0.39
VEGFA-209ENST00000425836 ZNF767PQ75MW2 155 aa17.47■□□□□ 0.39
VEGFA-209ENST00000425836 C11orf72Q8NBR9 251 aa17.47■□□□□ 0.39
VEGFA-209ENST00000425836 ZC2HC1AQ96GY0 325 aa17.47■□□□□ 0.39
VEGFA-209ENST00000425836 TIMM8BQ9Y5J9 83 aaPredicted RBP17.47■□□□□ 0.39
VEGFA-209ENST00000425836 TDRG1Q3Y452 100 aa17.46■□□□□ 0.39
VEGFA-209ENST00000425836 BAGE2Q86Y30 109 aa17.46■□□□□ 0.39
VEGFA-209ENST00000425836 TMEM183AQ8IXX5 376 aa17.46■□□□□ 0.39
VEGFA-209ENST00000425836 NOP10Q9NPE3 64 aaKnown RBP17.46■□□□□ 0.39
VEGFA-209ENST00000425836 MED9Q9NWA0 146 aa17.46■□□□□ 0.39
VEGFA-209ENST00000425836 C11orf21Q9P2W6 132 aa17.46■□□□□ 0.39
VEGFA-209ENST00000425836 TEX48A0A1B0GUV7 120 aa17.45■□□□□ 0.38
VEGFA-209ENST00000425836 LYRM9A8MSI8 78 aa17.45■□□□□ 0.38
VEGFA-209ENST00000425836 CRIP1P50238 77 aa17.45■□□□□ 0.38
VEGFA-209ENST00000425836 FAM210AQ96ND0 272 aa17.45■□□□□ 0.38
VEGFA-209ENST00000425836 GSN-AS1Q9NRJ2 163 aa17.45■□□□□ 0.38
VEGFA-209ENST00000425836 TOR2AQ5JU69 321 aa17.45■□□□□ 0.38
VEGFA-209ENST00000425836 NHLRC2Q8NBF2 726 aa17.45■□□□□ 0.38
VEGFA-209ENST00000425836 FABP5P3A8MUU1 101 aa17.44■□□□□ 0.38
VEGFA-209ENST00000425836 SNURFLB1AK76 121 aa17.44■□□□□ 0.38
VEGFA-209ENST00000425836 IBA57Q5T440 356 aaKnown RBP17.44■□□□□ 0.38
VEGFA-209ENST00000425836 Q6ZTC4 211 aa17.44■□□□□ 0.38
VEGFA-209ENST00000425836 MLST8Q9BVC4 326 aa17.44■□□□□ 0.38
VEGFA-209ENST00000425836 EIF5A2Q9GZV4 153 aaKnown RBP17.44■□□□□ 0.38
VEGFA-209ENST00000425836 GNRH2O43555 120 aa17.43■□□□□ 0.38
VEGFA-209ENST00000425836 CASC10Q5T4H9 136 aa17.43■□□□□ 0.38
VEGFA-209ENST00000425836 RAB19A4D1S5 217 aa17.42■□□□□ 0.38
VEGFA-209ENST00000425836 DAZ2Q13117 558 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 1030.1 ms