RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 SPINK4O60575 86 aa11.11□□□□□ -0.63
COL18A1-205ENST00000423214 ZNF324O75467 553 aaPredicted RBP11.11□□□□□ -0.63
COL18A1-205ENST00000423214 EIF3GO75821 320 aaKnown RBP eCLIP11.11□□□□□ -0.63
COL18A1-205ENST00000423214 PTTG1O95997 202 aa11.11□□□□□ -0.63
COL18A1-205ENST00000423214 IFNA5P01569 189 aa11.11□□□□□ -0.63
COL18A1-205ENST00000423214 NBEAP1P0C6P0 100 aa11.11□□□□□ -0.63
COL18A1-205ENST00000423214 FFAR4Q5NUL3 377 aa11.11□□□□□ -0.63
COL18A1-205ENST00000423214 FAM19A4Q96LR4 140 aa11.11□□□□□ -0.63
COL18A1-205ENST00000423214 PAXXQ9BUH6 204 aa11.11□□□□□ -0.63
COL18A1-205ENST00000423214 KCNIP2Q9NS61 270 aa11.11□□□□□ -0.63
COL18A1-205ENST00000423214 KLF12Q9Y4X4 402 aa11.11□□□□□ -0.63
COL18A1-205ENST00000423214 DNAH5Q8TE73 4624 aa11.1□□□□□ -0.63
COL18A1-205ENST00000423214 NXPH4O95158 308 aa11.1□□□□□ -0.63
COL18A1-205ENST00000423214 IGHV3-53P01767 116 aa11.1□□□□□ -0.63
COL18A1-205ENST00000423214 CRISP2P16562 243 aa11.1□□□□□ -0.63
COL18A1-205ENST00000423214 ZNF415Q09FC8 603 aa11.1□□□□□ -0.63
COL18A1-205ENST00000423214 C9orf47Q6ZRZ4 202 aa11.1□□□□□ -0.63
COL18A1-205ENST00000423214 FXYD5Q96DB9 178 aa11.1□□□□□ -0.63
COL18A1-205ENST00000423214 ST6GAL2Q96JF0 529 aa11.1□□□□□ -0.63
COL18A1-205ENST00000423214 MRPL32Q9BYC8 188 aaKnown RBP11.1□□□□□ -0.63
COL18A1-205ENST00000423214 MED28Q9H204 178 aa11.1□□□□□ -0.63
COL18A1-205ENST00000423214 MRPL16Q9NX20 251 aaKnown RBP11.1□□□□□ -0.63
COL18A1-205ENST00000423214 EREGO14944 169 aa11.09□□□□□ -0.63
COL18A1-205ENST00000423214 NMBP08949 121 aa11.09□□□□□ -0.63
COL18A1-205ENST00000423214 ERVFC1-1P60608 527 aa11.09□□□□□ -0.63
COL18A1-205ENST00000423214 IGHV1OR15-1A0A075B7D0 117 aa11.08□□□□□ -0.64
COL18A1-205ENST00000423214 OR7C2O60412 319 aa11.08□□□□□ -0.64
COL18A1-205ENST00000423214 SLAQ13239 276 aa11.08□□□□□ -0.64
COL18A1-205ENST00000423214 PRR9Q5T870 116 aa11.08□□□□□ -0.64
COL18A1-205ENST00000423214 ZFAND2AQ8N6M9 145 aa11.08□□□□□ -0.64
COL18A1-205ENST00000423214 PHYHIPLQ96FC7 376 aa11.08□□□□□ -0.64
COL18A1-205ENST00000423214 VGLL1Q99990 258 aa11.08□□□□□ -0.64
COL18A1-205ENST00000423214 PRO0255Q9UI72 69 aa11.08□□□□□ -0.64
COL18A1-205ENST00000423214 TP53TG3Q9ULZ0 132 aa11.08□□□□□ -0.64
COL18A1-205ENST00000423214 RANP62826 216 aaKnown RBP11.07□□□□□ -0.64
COL18A1-205ENST00000423214 Q5BKY6 102 aa11.07□□□□□ -0.64
COL18A1-205ENST00000423214 Q8TAT8 98 aa11.07□□□□□ -0.64
COL18A1-205ENST00000423214 ZNF492Q9P255 531 aa11.07□□□□□ -0.64
COL18A1-205ENST00000423214 CSN1S1P47710 185 aa11.06□□□□□ -0.64
COL18A1-205ENST00000423214 ZNF138P52744 262 aa11.06□□□□□ -0.64
COL18A1-205ENST00000423214 MRPL23Q16540 153 aaKnown RBP11.06□□□□□ -0.64
COL18A1-205ENST00000423214 Q6ZRN7 208 aaPredicted RBP11.06□□□□□ -0.64
COL18A1-205ENST00000423214 TRGV4A0A0C4DH28 118 aa11.05□□□□□ -0.64
COL18A1-205ENST00000423214 CRYBA4P53673 196 aa11.05□□□□□ -0.64
COL18A1-205ENST00000423214 UBE2L3P68036 154 aaKnown RBP11.05□□□□□ -0.64
COL18A1-205ENST00000423214 NFE4Q86UQ8 179 aa11.05□□□□□ -0.64
COL18A1-205ENST00000423214 PCNPQ8WW12 178 aaKnown RBP11.05□□□□□ -0.64
COL18A1-205ENST00000423214 C8orf49Q96NF6 230 aa11.05□□□□□ -0.64
COL18A1-205ENST00000423214 HHLA3Q9XRX5 114 aa11.05□□□□□ -0.64
COL18A1-205ENST00000423214 HMGB3O15347 200 aaKnown RBP11.04□□□□□ -0.64
COL18A1-205ENST00000423214 RAB2AP61019 212 aa11.04□□□□□ -0.64
COL18A1-205ENST00000423214 MUC21Q5SSG8 566 aa11.04□□□□□ -0.64
COL18A1-205ENST00000423214 CDPF1Q6NVV7 123 aa11.04□□□□□ -0.64
COL18A1-205ENST00000423214 Q6ZQT7 251 aa11.04□□□□□ -0.64
COL18A1-205ENST00000423214 NEGR1Q7Z3B1 354 aa11.04□□□□□ -0.64
COL18A1-205ENST00000423214 LY96Q9Y6Y9 160 aa11.04□□□□□ -0.64
COL18A1-205ENST00000423214 TRAV9-2A0A087WT02 112 aa11.03□□□□□ -0.64
COL18A1-205ENST00000423214 TRBV7-9A0A0J9YWB2 115 aa11.03□□□□□ -0.64
COL18A1-205ENST00000423214 RBAKDNA6NC62 111 aa11.03□□□□□ -0.64
COL18A1-205ENST00000423214 SRIP30626 198 aa11.03□□□□□ -0.64
COL18A1-205ENST00000423214 TAS2R45P59539 299 aa11.03□□□□□ -0.64
COL18A1-205ENST00000423214 ACOT6Q3I5F7 207 aaPredicted RBP11.03□□□□□ -0.64
COL18A1-205ENST00000423214 KHDC3LQ587J8 217 aa11.03□□□□□ -0.64
COL18A1-205ENST00000423214 HSD17B11Q8NBQ5 300 aa11.03□□□□□ -0.64
COL18A1-205ENST00000423214 HYLS1Q96M11 299 aa11.03□□□□□ -0.64
COL18A1-205ENST00000423214 PGPEP1Q9NXJ5 209 aa11.03□□□□□ -0.64
COL18A1-205ENST00000423214 A0A1W2PPV4 95 aa11.02□□□□□ -0.65
COL18A1-205ENST00000423214 EPM2AB3EWF7 344 aa11.02□□□□□ -0.65
COL18A1-205ENST00000423214 FHL2Q14192 279 aa11.02□□□□□ -0.65
COL18A1-205ENST00000423214 LYPD5Q6UWN5 251 aa11.02□□□□□ -0.65
COL18A1-205ENST00000423214 OR10G4Q8NGN3 311 aa11.02□□□□□ -0.65
COL18A1-205ENST00000423214 OR10G9Q8NGN4 311 aa11.02□□□□□ -0.65
COL18A1-205ENST00000423214 OR10G7Q8NGN6 311 aa11.02□□□□□ -0.65
COL18A1-205ENST00000423214 TRGV11A0A075B6L2 103 aa11.01□□□□□ -0.65
COL18A1-205ENST00000423214 SFTA3P0C7M3 94 aa11.01□□□□□ -0.65
COL18A1-205ENST00000423214 ZNF266Q14584 549 aa11.01□□□□□ -0.65
COL18A1-205ENST00000423214 TMEM183BQ1AE95 376 aa11.01□□□□□ -0.65
COL18A1-205ENST00000423214 FAM159AQ6UWV7 190 aa11.01□□□□□ -0.65
COL18A1-205ENST00000423214 TMEM183AQ8IXX5 376 aa11.01□□□□□ -0.65
COL18A1-205ENST00000423214 LYPD1Q8N2G4 141 aa11.01□□□□□ -0.65
COL18A1-205ENST00000423214 AQP10Q96PS8 301 aa11.01□□□□□ -0.65
COL18A1-205ENST00000423214 PGPA6NDG6 321 aa11□□□□□ -0.65
COL18A1-205ENST00000423214 ORM1P02763 201 aa11□□□□□ -0.65
COL18A1-205ENST00000423214 GIPP09681 153 aaPredicted RBP11□□□□□ -0.65
COL18A1-205ENST00000423214 DNAH10OSP0CZ25 163 aa11□□□□□ -0.65
COL18A1-205ENST00000423214 FUSP35637 526 aaKnown RBP eCLIP11□□□□□ -0.652e-6■■■■□ 19.4
COL18A1-205ENST00000423214 SPXQ9BT56 116 aa11□□□□□ -0.65
COL18A1-205ENST00000423214 NAGKQ9UJ70 344 aa11□□□□□ -0.65
COL18A1-205ENST00000423214 RPH3ALQ9UNE2 315 aa11□□□□□ -0.65
COL18A1-205ENST00000423214 TNFRSF18Q9Y5U5 241 aa11□□□□□ -0.65
COL18A1-205ENST00000423214 C9JCJ5 164 aa10.99□□□□□ -0.65
COL18A1-205ENST00000423214 DIRC3C9JPN6 131 aa10.99□□□□□ -0.65
COL18A1-205ENST00000423214 K7EQD1 137 aa10.99□□□□□ -0.65
COL18A1-205ENST00000423214 GYPEP15421 78 aa10.99□□□□□ -0.65
COL18A1-205ENST00000423214 EVI2AP22794 236 aa10.99□□□□□ -0.65
COL18A1-205ENST00000423214 ATP6V0CP27449 155 aa10.99□□□□□ -0.65
COL18A1-205ENST00000423214 RGS21Q2M5E4 152 aa10.99□□□□□ -0.65
COL18A1-205ENST00000423214 Q6AWC8 147 aa10.99□□□□□ -0.65
COL18A1-205ENST00000423214 WFDC10BQ8IUB3 73 aa10.99□□□□□ -0.65
COL18A1-205ENST00000423214 ZNF479Q96JC4 524 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms