RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 Q8NAQ8 132 aa6.7□□□□□ -1.34
PDGFC-202ENST00000422544 HIST1H2BAQ96A08 127 aa6.7□□□□□ -1.34
PDGFC-202ENST00000422544 TVP23CQ96ET8 276 aa6.7□□□□□ -1.34
PDGFC-202ENST00000422544 EDA2RQ9HAV5 297 aa6.7□□□□□ -1.34
PDGFC-202ENST00000422544 PSG8Q9UQ74 426 aa6.7□□□□□ -1.34
PDGFC-202ENST00000422544 ARL2-SNX15V9GYD0 113 aa6.7□□□□□ -1.34
PDGFC-202ENST00000422544 TRBV7-9A0A0J9YWB2 115 aa6.69□□□□□ -1.34
PDGFC-202ENST00000422544 C7orf71A4D174 169 aa6.69□□□□□ -1.34
PDGFC-202ENST00000422544 ZNF705GA8MUZ8 300 aaPredicted RBP6.69□□□□□ -1.34
PDGFC-202ENST00000422544 C11orf94C9JXX5 98 aa6.69□□□□□ -1.34
PDGFC-202ENST00000422544 F6UZH7 168 aa6.69□□□□□ -1.34
PDGFC-202ENST00000422544 IGLV2-11P01706 119 aa6.69□□□□□ -1.34
PDGFC-202ENST00000422544 NMBP08949 121 aa6.69□□□□□ -1.34
PDGFC-202ENST00000422544 MIFP14174 115 aa6.69□□□□□ -1.34
PDGFC-202ENST00000422544 HTN1P15515 57 aa6.69□□□□□ -1.34
PDGFC-202ENST00000422544 PRR9Q5T870 116 aa6.69□□□□□ -1.34
PDGFC-202ENST00000422544 Q6ZQT7 251 aa6.69□□□□□ -1.34
PDGFC-202ENST00000422544 PRNTQ86SH4 94 aa6.69□□□□□ -1.34
PDGFC-202ENST00000422544 ZNF680Q8NEM1 530 aa6.69□□□□□ -1.34
PDGFC-202ENST00000422544 NEU1Q99519 415 aa6.69□□□□□ -1.34
PDGFC-202ENST00000422544 TREM1Q9NP99 234 aa6.69□□□□□ -1.34
PDGFC-202ENST00000422544 MANBALQ9NQG1 85 aa6.69□□□□□ -1.34
PDGFC-202ENST00000422544 LENEPQ9Y5L5 61 aa6.69□□□□□ -1.34
PDGFC-202ENST00000422544 SCO2A0A1W2PP80 73 aa6.68□□□□□ -1.34
PDGFC-202ENST00000422544 SMIM9A6NGZ8 99 aa6.68□□□□□ -1.34
PDGFC-202ENST00000422544 A6NJY4 79 aa6.68□□□□□ -1.34
PDGFC-202ENST00000422544 H7BYZ3 331 aa6.68□□□□□ -1.34
PDGFC-202ENST00000422544 ZNF324O75467 553 aaPredicted RBP6.68□□□□□ -1.34
PDGFC-202ENST00000422544 IFNA1P01562 189 aa6.68□□□□□ -1.34
PDGFC-202ENST00000422544 AZU1P20160 251 aa6.68□□□□□ -1.34
PDGFC-202ENST00000422544 EMP1P54849 157 aa6.68□□□□□ -1.34
PDGFC-202ENST00000422544 TAS2R60P59551 318 aa6.68□□□□□ -1.34
PDGFC-202ENST00000422544 FLI1Q01543 452 aaPredicted RBP6.68□□□□□ -1.34
PDGFC-202ENST00000422544 PMS2P11Q13670 270 aa6.68□□□□□ -1.34
PDGFC-202ENST00000422544 RRN3P1Q2M238 152 aa6.68□□□□□ -1.34
PDGFC-202ENST00000422544 TMEM256Q8N2U0 113 aa6.68□□□□□ -1.34
PDGFC-202ENST00000422544 TMEM75Q8N9X5 138 aa6.68□□□□□ -1.34
PDGFC-202ENST00000422544 LYPD6BQ8NI32 183 aa6.68□□□□□ -1.34
PDGFC-202ENST00000422544 PCNPQ8WW12 178 aaKnown RBP6.68□□□□□ -1.34
PDGFC-202ENST00000422544 WWC2-AS2Q96NR7 200 aa6.68□□□□□ -1.34
PDGFC-202ENST00000422544 C20orf144Q9BQM9 153 aa6.68□□□□□ -1.34
PDGFC-202ENST00000422544 TCEAL7Q9BRU2 100 aa6.68□□□□□ -1.34
PDGFC-202ENST00000422544 NIPSNAP3BQ9BS92 247 aa6.68□□□□□ -1.34
PDGFC-202ENST00000422544 LOC102723971A0A1B0GUV8 181 aa6.67□□□□□ -1.34
PDGFC-202ENST00000422544 FBLL1A6NHQ2 334 aaKnown RBP6.67□□□□□ -1.34
PDGFC-202ENST00000422544 BCL2P10415 239 aa6.67□□□□□ -1.34
PDGFC-202ENST00000422544 AKR1C3P42330 323 aa6.67□□□□□ -1.34
PDGFC-202ENST00000422544 C8orf49Q96NF6 230 aa6.67□□□□□ -1.34
PDGFC-202ENST00000422544 NDFIP1Q9BT67 221 aa6.67□□□□□ -1.34
PDGFC-202ENST00000422544 C11orf68Q9H3H3 251 aaKnown RBP6.67□□□□□ -1.34
PDGFC-202ENST00000422544 KLF12Q9Y4X4 402 aa6.67□□□□□ -1.34
PDGFC-202ENST00000422544 UBE2G1P62253 170 aa6.66□□□□□ -1.34
PDGFC-202ENST00000422544 MEF2BQ02080 365 aaPredicted RBP6.66□□□□□ -1.34
PDGFC-202ENST00000422544 TMEM183BQ1AE95 376 aa6.66□□□□□ -1.34
PDGFC-202ENST00000422544 SAPCD1Q5SSQ6 148 aa6.66□□□□□ -1.34
PDGFC-202ENST00000422544 LCE2AQ5TA79 106 aaPredicted RBP6.66□□□□□ -1.34
PDGFC-202ENST00000422544 Q86TA4 180 aa6.66□□□□□ -1.34
PDGFC-202ENST00000422544 C2CD4CQ8TF44 421 aa6.66□□□□□ -1.34
PDGFC-202ENST00000422544 FMC1Q96HJ9 113 aa6.66□□□□□ -1.34
PDGFC-202ENST00000422544 TXNDC17Q9BRA2 123 aa6.66□□□□□ -1.34
PDGFC-202ENST00000422544 PYGO2Q9BRQ0 406 aa6.66□□□□□ -1.34
PDGFC-202ENST00000422544 VAX2Q9UIW0 290 aa6.66□□□□□ -1.34
PDGFC-202ENST00000422544 TMEM189A5PLL7 270 aa6.65□□□□□ -1.34
PDGFC-202ENST00000422544 RBFOX3A6NFN3 312 aa6.65□□□□□ -1.34
PDGFC-202ENST00000422544 RGS13O14921 159 aa6.65□□□□□ -1.34
PDGFC-202ENST00000422544 TAGLN2P37802 199 aaKnown RBP6.65□□□□□ -1.34
PDGFC-202ENST00000422544 ZNF80P51504 273 aaPredicted RBP6.65□□□□□ -1.34
PDGFC-202ENST00000422544 SMUG1Q53HV7 270 aa6.65□□□□□ -1.34
PDGFC-202ENST00000422544 MUC21Q5SSG8 566 aa6.65□□□□□ -1.34
PDGFC-202ENST00000422544 LCE2CQ5TA81 110 aa6.65□□□□□ -1.34
PDGFC-202ENST00000422544 Q6AWC8 147 aa6.65□□□□□ -1.34
PDGFC-202ENST00000422544 IL17DQ8TAD2 202 aa6.65□□□□□ -1.34
PDGFC-202ENST00000422544 C11orf45Q8TAV5 145 aa6.65□□□□□ -1.34
PDGFC-202ENST00000422544 ZFP30Q9Y2G7 519 aa6.65□□□□□ -1.34
PDGFC-202ENST00000422544 KMT2AQ03164 3969 aa6.65□□□□□ -1.35
PDGFC-202ENST00000422544 KIAA1109Q2LD37 5005 aa6.64□□□□□ -1.35
PDGFC-202ENST00000422544 IGHV1OR15-1A0A075B7D0 117 aa6.64□□□□□ -1.35
PDGFC-202ENST00000422544 TRAV21A0A0B4J279 112 aa6.64□□□□□ -1.35
PDGFC-202ENST00000422544 TRBV6-1A0A0K0K1D8 114 aa6.64□□□□□ -1.35
PDGFC-202ENST00000422544 PLAC8L1A1L4L8 177 aa6.64□□□□□ -1.35
PDGFC-202ENST00000422544 CXorf65A6NEN9 183 aa6.64□□□□□ -1.35
PDGFC-202ENST00000422544 CBY3A6NI87 242 aa6.64□□□□□ -1.35
PDGFC-202ENST00000422544 PDE6DO43924 150 aa6.64□□□□□ -1.35
PDGFC-202ENST00000422544 GCGP01275 180 aa6.64□□□□□ -1.35
PDGFC-202ENST00000422544 LTAP01374 205 aa6.64□□□□□ -1.35
PDGFC-202ENST00000422544 S100A9P06702 114 aaKnown RBP6.64□□□□□ -1.35
PDGFC-202ENST00000422544 RPL35P42766 123 aaKnown RBP6.64□□□□□ -1.35
PDGFC-202ENST00000422544 NANOS2P60321 138 aaKnown RBP6.64□□□□□ -1.35
PDGFC-202ENST00000422544 BAGE2Q86Y30 109 aa6.64□□□□□ -1.35
PDGFC-202ENST00000422544 EIF4E3Q8N5X7 224 aaKnown RBP6.64□□□□□ -1.35
PDGFC-202ENST00000422544 RNASE8Q8TDE3 154 aaKnown RBP6.64□□□□□ -1.35
PDGFC-202ENST00000422544 C11orf52Q96A22 123 aa6.64□□□□□ -1.35
PDGFC-202ENST00000422544 C16orf74Q96GX8 76 aa6.64□□□□□ -1.35
PDGFC-202ENST00000422544 LINC00467Q9BRT7 94 aa6.64□□□□□ -1.35
PDGFC-202ENST00000422544 DERL1Q9BUN8 251 aa6.64□□□□□ -1.35
PDGFC-202ENST00000422544 MED9Q9NWA0 146 aa6.64□□□□□ -1.35
PDGFC-202ENST00000422544 NAGKQ9UJ70 344 aa6.64□□□□□ -1.35
PDGFC-202ENST00000422544 TP53TG3Q9ULZ0 132 aa6.64□□□□□ -1.35
PDGFC-202ENST00000422544 CELA1Q9UNI1 258 aa6.64□□□□□ -1.35
PDGFC-202ENST00000422544 VPS13DQ5THJ4 4388 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms