RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 FABP5P3A8MUU1 101 aa16.47■□□□□ 0.23
USP48-205ENST00000421625 AMTNQ6UX39 209 aa16.47■□□□□ 0.23
USP48-205ENST00000421625 ARPC1AQ92747 370 aa16.47■□□□□ 0.23
USP48-205ENST00000421625 NDPQ00604 133 aa16.46■□□□□ 0.23
USP48-205ENST00000421625 Q8N8P6 123 aa16.46■□□□□ 0.23
USP48-205ENST00000421625 DCHS2Q6V1P9 2916 aa16.46■□□□□ 0.23
USP48-205ENST00000421625 GAGE12HA6NDE8 117 aa16.46■□□□□ 0.23
USP48-205ENST00000421625 HES1Q14469 280 aa16.46■□□□□ 0.23
USP48-205ENST00000421625 SMPXQ9UHP9 88 aa16.46■□□□□ 0.23
USP48-205ENST00000421625 CFHR4Q92496 578 aa16.46■□□□□ 0.22
USP48-205ENST00000421625 TRAV26-2A0A0B4J265 109 aa16.45■□□□□ 0.22
USP48-205ENST00000421625 C12orf74Q32Q52 190 aa16.45■□□□□ 0.22
USP48-205ENST00000421625 CD300EQ496F6 205 aaPredicted RBP16.45■□□□□ 0.22
USP48-205ENST00000421625 SRSF2Q01130 221 aaKnown RBP16.45■□□□□ 0.22
USP48-205ENST00000421625 ETDBQ3ZM63 59 aa16.45■□□□□ 0.22
USP48-205ENST00000421625 IL17RELQ6ZVW7 336 aa16.45■□□□□ 0.22
USP48-205ENST00000421625 NCOR2Q9Y618 2525 aa16.45■□□□□ 0.22
USP48-205ENST00000421625 F8W1H4 67 aa16.44■□□□□ 0.22
USP48-205ENST00000421625 RNF182Q8N6D2 247 aa16.44■□□□□ 0.22
USP48-205ENST00000421625 LRBAP50851 2863 aa16.44■□□□□ 0.22
USP48-205ENST00000421625 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.44■□□□□ 0.22
USP48-205ENST00000421625 NDUFA3O95167 84 aa16.44■□□□□ 0.22
USP48-205ENST00000421625 KLRD1Q13241 179 aa16.44■□□□□ 0.22
USP48-205ENST00000421625 ZNF48Q96MX3 618 aaPredicted RBP16.44■□□□□ 0.22
USP48-205ENST00000421625 SRSF1Q07955 248 aaKnown RBP eCLIP16.43■□□□□ 0.223e-8■■■□□ 14.8
USP48-205ENST00000421625 C5orf64Q2M2E5 130 aa16.43■□□□□ 0.22
USP48-205ENST00000421625 LINC01559Q495D7 138 aa16.43■□□□□ 0.22
USP48-205ENST00000421625 NPBQ8NG41 125 aa16.43■□□□□ 0.22
USP48-205ENST00000421625 C11orf21Q9P2W6 132 aa16.43■□□□□ 0.22
USP48-205ENST00000421625 SPAG8Q99932 426 aaPredicted RBP16.43■□□□□ 0.22
USP48-205ENST00000421625 IGKV3D-20A0A0C4DH25 116 aa16.42■□□□□ 0.22
USP48-205ENST00000421625 PRRG2O14669 202 aa16.42■□□□□ 0.22
USP48-205ENST00000421625 CTSGP08311 255 aa16.42■□□□□ 0.22
USP48-205ENST00000421625 HLA-DRB4P13762 266 aa16.42■□□□□ 0.22
USP48-205ENST00000421625 EFNA4P52798 201 aa16.42■□□□□ 0.22
USP48-205ENST00000421625 HLA-DRB4X5D2U9 266 aa16.42■□□□□ 0.22
USP48-205ENST00000421625 HIST1H4GQ99525 98 aa16.42■□□□□ 0.22
USP48-205ENST00000421625 DPM3Q9P2X0 92 aa16.42■□□□□ 0.22
USP48-205ENST00000421625 MYOZ3Q8TDC0 251 aa16.41■□□□□ 0.22
USP48-205ENST00000421625 SCGB1A1P11684 91 aa16.41■□□□□ 0.22
USP48-205ENST00000421625 NRACQ8N912 160 aa16.41■□□□□ 0.22
USP48-205ENST00000421625 INSL3P51460 131 aa16.4■□□□□ 0.22
USP48-205ENST00000421625 LAGE3Q14657 143 aa16.4■□□□□ 0.22
USP48-205ENST00000421625 TTC9CQ8N5M4 171 aa16.4■□□□□ 0.22
USP48-205ENST00000421625 WNK2Q9Y3S1 2297 aa16.4■□□□□ 0.22
USP48-205ENST00000421625 CCDC144NLQ6NUI1 221 aa16.4■□□□□ 0.22
USP48-205ENST00000421625 UFC1Q9Y3C8 167 aa16.4■□□□□ 0.22
USP48-205ENST00000421625 A0A087WX48 190 aa16.39■□□□□ 0.21
USP48-205ENST00000421625 PRR30Q53SZ7 412 aaPredicted RBP16.39■□□□□ 0.21
USP48-205ENST00000421625 LCNL1Q6ZST4 164 aa16.39■□□□□ 0.21
USP48-205ENST00000421625 NCBP2LA6PVI3 153 aaKnown RBP16.39■□□□□ 0.21
USP48-205ENST00000421625 Q6ZQT7 251 aa16.39■□□□□ 0.21
USP48-205ENST00000421625 IGHV3-66A0A0C4DH42 116 aa16.38■□□□□ 0.21
USP48-205ENST00000421625 TAL2Q16559 108 aa16.38■□□□□ 0.21
USP48-205ENST00000421625 J3QR89 54 aa16.38■□□□□ 0.21
USP48-205ENST00000421625 SPATA25Q9BR10 227 aa16.38■□□□□ 0.21
USP48-205ENST00000421625 PRO0461Q9UI25 63 aa16.38■□□□□ 0.21
USP48-205ENST00000421625 RRN3P1Q2M238 152 aa16.37■□□□□ 0.21
USP48-205ENST00000421625 GAGE13Q4V321 117 aa16.37■□□□□ 0.21
USP48-205ENST00000421625 TRBV7-3A0A075B6L6 115 aa16.37■□□□□ 0.21
USP48-205ENST00000421625 ZNF672Q499Z4 452 aaPredicted RBP16.37■□□□□ 0.21
USP48-205ENST00000421625 B9A039 149 aa16.36■□□□□ 0.21
USP48-205ENST00000421625 Q8NA96 180 aa16.36■□□□□ 0.21
USP48-205ENST00000421625 IGHV7-4-1A0A0J9YVY3 117 aa16.36■□□□□ 0.21
USP48-205ENST00000421625 IGHV3OR16-13A0A075B7E8 117 aa16.35■□□□□ 0.21
USP48-205ENST00000421625 IGHV3-74A0A0B4J1X5 117 aa16.35■□□□□ 0.21
USP48-205ENST00000421625 LY6HO94772 140 aa16.35■□□□□ 0.21
USP48-205ENST00000421625 ATP5G2Q06055 141 aa16.35■□□□□ 0.21
USP48-205ENST00000421625 OR11H6Q8NGC7 330 aa16.35■□□□□ 0.21
USP48-205ENST00000421625 AGPAT4-IT1Q9H0P7 198 aa16.35■□□□□ 0.21
USP48-205ENST00000421625 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.35■□□□□ 0.21
USP48-205ENST00000421625 PLNP26678 52 aa16.34■□□□□ 0.21
USP48-205ENST00000421625 LY6G5BQ8NDX9 201 aa16.34■□□□□ 0.21
USP48-205ENST00000421625 KLK15Q9H2R5 256 aa16.34■□□□□ 0.21
USP48-205ENST00000421625 SVEP1Q4LDE5 3571 aa16.34■□□□□ 0.21
USP48-205ENST00000421625 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.34■□□□□ 0.21
USP48-205ENST00000421625 ZNF502Q8TBZ5 544 aa16.34■□□□□ 0.21
USP48-205ENST00000421625 ATP6V0BQ99437 205 aa16.33■□□□□ 0.21
USP48-205ENST00000421625 COL6A6A6NMZ7 2263 aa16.33■□□□□ 0.21
USP48-205ENST00000421625 CYSLTR1Q9Y271 337 aa16.32■□□□□ 0.2
USP48-205ENST00000421625 BUB3O43684 328 aa16.32■□□□□ 0.2
USP48-205ENST00000421625 MORN3Q6PF18 240 aaPredicted RBP16.32■□□□□ 0.2
USP48-205ENST00000421625 MYMXA0A1B0GTQ4 84 aa16.31■□□□□ 0.2
USP48-205ENST00000421625 A0A1B0GV72 72 aa16.31■□□□□ 0.2
USP48-205ENST00000421625 F8VRH5 84 aa16.31■□□□□ 0.2
USP48-205ENST00000421625 CD3EP07766 207 aa16.31■□□□□ 0.2
USP48-205ENST00000421625 IGHV3-49A0A0A0MS15 119 aa16.31■□□□□ 0.2
USP48-205ENST00000421625 A0A1B0GWB2 263 aa16.31■□□□□ 0.2
USP48-205ENST00000421625 H7C1H1 209 aa16.31■□□□□ 0.2
USP48-205ENST00000421625 SPANXN1Q5VSR9 72 aa16.31■□□□□ 0.2
USP48-205ENST00000421625 ZFAND3Q9H8U3 227 aa16.31■□□□□ 0.2
USP48-205ENST00000421625 RBAKDNA6NC62 111 aa16.3■□□□□ 0.2
USP48-205ENST00000421625 ODF3BA8MYP8 253 aa16.3■□□□□ 0.2
USP48-205ENST00000421625 OR11H12B2RN74 326 aa16.3■□□□□ 0.2
USP48-205ENST00000421625 OR11H1Q8NG94 326 aa16.3■□□□□ 0.2
USP48-205ENST00000421625 OR11H2Q8NH07 326 aa16.3■□□□□ 0.2
USP48-205ENST00000421625 K7ENP7 123 aa16.3■□□□□ 0.2
USP48-205ENST00000421625 NDUFS8O00217 210 aa16.3■□□□□ 0.2
USP48-205ENST00000421625 SCGB2A1O75556 95 aa16.3■□□□□ 0.2
USP48-205ENST00000421625 C20orf78Q9BR46 151 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms