RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 TRAV1-1A0A0B4J248 108 aa3.39□□□□□ -1.87
PTP4A1P1-201ENST00000420539 H3BQ15 152 aa3.39□□□□□ -1.87
PTP4A1P1-201ENST00000420539 KPRPQ5T749 579 aaPredicted RBP3.39□□□□□ -1.87
PTP4A1P1-201ENST00000420539 C12orf73Q69YU5 71 aa3.39□□□□□ -1.87
PTP4A1P1-201ENST00000420539 SBSPONQ8IVN8 264 aa3.39□□□□□ -1.87
PTP4A1P1-201ENST00000420539 Q8N8P6 123 aa3.39□□□□□ -1.87
PTP4A1P1-201ENST00000420539 SCAF11Q99590 1463 aaKnown RBP3.39□□□□□ -1.87
PTP4A1P1-201ENST00000420539 MALRD1Q5VYJ5 2156 aa3.39□□□□□ -1.87
PTP4A1P1-201ENST00000420539 KIDINS220Q9ULH0 1771 aa3.38□□□□□ -1.87
PTP4A1P1-201ENST00000420539 TRAV14DV4A0A0A6YYC5 116 aa3.38□□□□□ -1.87
PTP4A1P1-201ENST00000420539 C5orf67F2Z3F1 127 aa3.38□□□□□ -1.87
PTP4A1P1-201ENST00000420539 G3V3Q6 166 aa3.38□□□□□ -1.87
PTP4A1P1-201ENST00000420539 SSSCA1O60232 199 aa3.38□□□□□ -1.87
PTP4A1P1-201ENST00000420539 MRPS14O60783 128 aaKnown RBP3.38□□□□□ -1.87
PTP4A1P1-201ENST00000420539 PROSCO94903 275 aa3.38□□□□□ -1.87
PTP4A1P1-201ENST00000420539 PIRTP0C851 137 aa3.38□□□□□ -1.87
PTP4A1P1-201ENST00000420539 DCDP81605 110 aaKnown RBP3.38□□□□□ -1.87
PTP4A1P1-201ENST00000420539 NDPQ00604 133 aa3.38□□□□□ -1.87
PTP4A1P1-201ENST00000420539 INSL4Q14641 139 aa3.38□□□□□ -1.87
PTP4A1P1-201ENST00000420539 LINC00269Q8N2A0 174 aa3.38□□□□□ -1.87
PTP4A1P1-201ENST00000420539 C20orf166-AS1Q96NR2 134 aa3.38□□□□□ -1.87
PTP4A1P1-201ENST00000420539 SMIM7Q9BQ49 75 aa3.38□□□□□ -1.87
PTP4A1P1-201ENST00000420539 PLEKHH2Q8IVE3 1493 aa3.38□□□□□ -1.87
PTP4A1P1-201ENST00000420539 ROBO1Q9Y6N7 1651 aa3.38□□□□□ -1.87
PTP4A1P1-201ENST00000420539 COL27A1Q8IZC6 1860 aaPredicted RBP3.38□□□□□ -1.87
PTP4A1P1-201ENST00000420539 SHANK3Q9BYB0 1731 aa3.38□□□□□ -1.87
PTP4A1P1-201ENST00000420539 SCN4AP35499 1836 aa3.37□□□□□ -1.87
PTP4A1P1-201ENST00000420539 GAPVD1Q14C86 1478 aa3.37□□□□□ -1.87
PTP4A1P1-201ENST00000420539 IGHV3-64A0A075B6Q5 118 aa3.37□□□□□ -1.87
PTP4A1P1-201ENST00000420539 ZNF345Q14585 488 aa3.37□□□□□ -1.87
PTP4A1P1-201ENST00000420539 ZNF826PQ6ZT77 177 aa3.37□□□□□ -1.87
PTP4A1P1-201ENST00000420539 USP54Q70EL1 1684 aa3.36□□□□□ -1.87
PTP4A1P1-201ENST00000420539 ABCC5O15440 1437 aa3.36□□□□□ -1.87
PTP4A1P1-201ENST00000420539 CASKIN1Q8WXD9 1431 aa3.36□□□□□ -1.87
PTP4A1P1-201ENST00000420539 ABCC3O15438 1527 aa3.36□□□□□ -1.87
PTP4A1P1-201ENST00000420539 A0A0J9YX75 114 aa3.36□□□□□ -1.87
PTP4A1P1-201ENST00000420539 PIPP12273 146 aaPredicted RBP3.36□□□□□ -1.87
PTP4A1P1-201ENST00000420539 PEA15Q15121 130 aa3.36□□□□□ -1.87
PTP4A1P1-201ENST00000420539 LINC00483Q53H64 154 aa3.36□□□□□ -1.87
PTP4A1P1-201ENST00000420539 SPANXN5Q5MJ07 72 aa3.36□□□□□ -1.87
PTP4A1P1-201ENST00000420539 UNQ5815/PRO19632Q6UWF5 114 aa3.36□□□□□ -1.87
PTP4A1P1-201ENST00000420539 SLC25A26Q70HW3 274 aa3.36□□□□□ -1.87
PTP4A1P1-201ENST00000420539 C5orf38Q86SI9 138 aa3.36□□□□□ -1.87
PTP4A1P1-201ENST00000420539 C10orf82Q8WW14 230 aa3.36□□□□□ -1.87
PTP4A1P1-201ENST00000420539 MUCL1Q96DR8 90 aa3.36□□□□□ -1.87
PTP4A1P1-201ENST00000420539 MYO9BQ13459 2157 aa3.36□□□□□ -1.87
PTP4A1P1-201ENST00000420539 SLX4Q8IY92 1834 aa3.35□□□□□ -1.87
PTP4A1P1-201ENST00000420539 UBE2L5PA0A1B0GUS4 154 aa3.35□□□□□ -1.87
PTP4A1P1-201ENST00000420539 K7EP34 96 aa3.35□□□□□ -1.87
PTP4A1P1-201ENST00000420539 GNGT2O14610 69 aa3.35□□□□□ -1.87
PTP4A1P1-201ENST00000420539 DSCR4P56555 118 aaPredicted RBP3.35□□□□□ -1.87
PTP4A1P1-201ENST00000420539 RPL26P61254 145 aaKnown RBP3.35□□□□□ -1.87
PTP4A1P1-201ENST00000420539 UBE2L3P68036 154 aaKnown RBP3.35□□□□□ -1.87
PTP4A1P1-201ENST00000420539 IQCJQ1A5X6 159 aa3.35□□□□□ -1.87
PTP4A1P1-201ENST00000420539 ARPINQ7Z6K5 226 aa3.35□□□□□ -1.87
PTP4A1P1-201ENST00000420539 LINC00052Q96N35 136 aa3.35□□□□□ -1.87
PTP4A1P1-201ENST00000420539 KIF25-AS1Q9Y6Z4 181 aa3.35□□□□□ -1.87
PTP4A1P1-201ENST00000420539 ARAP2Q8WZ64 1704 aa3.35□□□□□ -1.87
PTP4A1P1-201ENST00000420539 C10orf71Q711Q0 1435 aa3.35□□□□□ -1.87
PTP4A1P1-201ENST00000420539 ADGRB3O60242 1522 aa3.34□□□□□ -1.87
PTP4A1P1-201ENST00000420539 CDC42BPBQ9Y5S2 1711 aa3.34□□□□□ -1.87
PTP4A1P1-201ENST00000420539 E7EUB6 86 aa3.34□□□□□ -1.87
PTP4A1P1-201ENST00000420539 BAALC-AS2P0C853 105 aa3.34□□□□□ -1.87
PTP4A1P1-201ENST00000420539 ATP5EP56381 51 aaPredicted RBP3.34□□□□□ -1.87
PTP4A1P1-201ENST00000420539 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
PTP4A1P1-201ENST00000420539 SPANXN1Q5VSR9 72 aa3.34□□□□□ -1.87
PTP4A1P1-201ENST00000420539 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
PTP4A1P1-201ENST00000420539 TMEM136Q6ZRR5 245 aa3.34□□□□□ -1.87
PTP4A1P1-201ENST00000420539 ZNF720Q7Z2F6 126 aa3.34□□□□□ -1.87
PTP4A1P1-201ENST00000420539 DYNLRB2Q8TF09 96 aa3.34□□□□□ -1.87
PTP4A1P1-201ENST00000420539 KLK12Q9UKR0 248 aa3.34□□□□□ -1.87
PTP4A1P1-201ENST00000420539 CCDC88CQ9P219 2028 aa3.34□□□□□ -1.88
PTP4A1P1-201ENST00000420539 CCDC141Q6ZP82 1450 aa3.34□□□□□ -1.88
PTP4A1P1-201ENST00000420539 MAGI2Q86UL8 1455 aa3.34□□□□□ -1.88
PTP4A1P1-201ENST00000420539 CHD1O14646 1710 aa3.33□□□□□ -1.88
PTP4A1P1-201ENST00000420539 ABCA3Q99758 1704 aa3.33□□□□□ -1.88
PTP4A1P1-201ENST00000420539 ZSWIM8A7E2V4 1837 aa3.33□□□□□ -1.88
PTP4A1P1-201ENST00000420539 TUBGCP6Q96RT7 1819 aa3.33□□□□□ -1.88
PTP4A1P1-201ENST00000420539 IGLV10-54A0A075B6I4 117 aa3.33□□□□□ -1.88
PTP4A1P1-201ENST00000420539 A0A087WSZ3 146 aa3.33□□□□□ -1.88
PTP4A1P1-201ENST00000420539 UBL3O95164 117 aa3.33□□□□□ -1.88
PTP4A1P1-201ENST00000420539 NMBP08949 121 aa3.33□□□□□ -1.88
PTP4A1P1-201ENST00000420539 ADCYAP1P18509 176 aa3.33□□□□□ -1.88
PTP4A1P1-201ENST00000420539 RBM3P98179 157 aaKnown RBP3.33□□□□□ -1.88
PTP4A1P1-201ENST00000420539 TDRG1Q3Y452 100 aa3.33□□□□□ -1.88
PTP4A1P1-201ENST00000420539 S100A7L2Q5SY68 101 aa3.33□□□□□ -1.88
PTP4A1P1-201ENST00000420539 CASC2Q6XLA1 102 aa3.33□□□□□ -1.88
PTP4A1P1-201ENST00000420539 OR8B3Q8NGG8 313 aa3.33□□□□□ -1.88
PTP4A1P1-201ENST00000420539 NDUFA12Q9UI09 145 aa3.33□□□□□ -1.88
PTP4A1P1-201ENST00000420539 UACAQ9BZF9 1416 aa3.33□□□□□ -1.88
PTP4A1P1-201ENST00000420539 PXDNLA1KZ92 1463 aa3.33□□□□□ -1.88
PTP4A1P1-201ENST00000420539 CPAMD8Q8IZJ3 1885 aa3.33□□□□□ -1.88
PTP4A1P1-201ENST00000420539 TNRC6AQ8NDV7 1962 aaKnown RBP3.32□□□□□ -1.88
PTP4A1P1-201ENST00000420539 IGLV2-18A0A075B6J9 118 aa3.32□□□□□ -1.88
PTP4A1P1-201ENST00000420539 HMSDA8MTL9 139 aa3.32□□□□□ -1.88
PTP4A1P1-201ENST00000420539 MIFP14174 115 aa3.32□□□□□ -1.88
PTP4A1P1-201ENST00000420539 ASIPP42127 132 aa3.32□□□□□ -1.88
PTP4A1P1-201ENST00000420539 SSR2P43308 183 aa3.32□□□□□ -1.88
PTP4A1P1-201ENST00000420539 DSCR10P59022 87 aa3.32□□□□□ -1.88
PTP4A1P1-201ENST00000420539 KRTAP10-6P60371 365 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms