RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 D6R8Y8 96 aa13.27□□□□□ -0.28
SYNGAP1-202ENST00000418600 GAGE2EQ4V326 116 aa13.27□□□□□ -0.28
SYNGAP1-202ENST00000418600 C11orf71Q6IPW1 123 aa13.27□□□□□ -0.28
SYNGAP1-202ENST00000418600 TM2D2Q9BX73 214 aa13.27□□□□□ -0.28
SYNGAP1-202ENST00000418600 GAGE2DQ9UEU5 116 aa13.27□□□□□ -0.28
SYNGAP1-202ENST00000418600 CEP250Q9BV73 2442 aa13.26□□□□□ -0.29
SYNGAP1-202ENST00000418600 GUSBP1Q15486 140 aa13.26□□□□□ -0.29
SYNGAP1-202ENST00000418600 KRTAP27-1Q3LI81 207 aa13.26□□□□□ -0.29
SYNGAP1-202ENST00000418600 TIMM21Q9BVV7 248 aa13.26□□□□□ -0.29
SYNGAP1-202ENST00000418600 TRAV1-1A0A0B4J248 108 aa13.26□□□□□ -0.29
SYNGAP1-202ENST00000418600 KRTAP10-9P60411 292 aa13.26□□□□□ -0.29
SYNGAP1-202ENST00000418600 WT1-ASQ06250 92 aa13.26□□□□□ -0.29
SYNGAP1-202ENST00000418600 DEFB125Q8N687 156 aa13.26□□□□□ -0.29
SYNGAP1-202ENST00000418600 C1orf43Q9BWL3 253 aa13.26□□□□□ -0.29
SYNGAP1-202ENST00000418600 TMEM126AQ9H061 195 aa13.26□□□□□ -0.29
SYNGAP1-202ENST00000418600 DEFB4AO15263 64 aa13.26□□□□□ -0.29
SYNGAP1-202ENST00000418600 LY6G6FQ5SQ64 297 aa13.26□□□□□ -0.29
SYNGAP1-202ENST00000418600 TMEM75Q8N9X5 138 aa13.26□□□□□ -0.29
SYNGAP1-202ENST00000418600 ARMS2P0C7Q2 107 aa13.25□□□□□ -0.29
SYNGAP1-202ENST00000418600 RBMY1FQ15415 496 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-202ENST00000418600 Q6ZSV7 163 aa13.25□□□□□ -0.29
SYNGAP1-202ENST00000418600 PRIMA1Q86XR5 153 aa13.25□□□□□ -0.29
SYNGAP1-202ENST00000418600 EDA2RQ9HAV5 297 aa13.25□□□□□ -0.29
SYNGAP1-202ENST00000418600 ARID1AO14497 2285 aa13.25□□□□□ -0.29
SYNGAP1-202ENST00000418600 CEP192Q8TEP8 1941 aa13.25□□□□□ -0.29
SYNGAP1-202ENST00000418600 U3KQE9 123 aa13.25□□□□□ -0.29
SYNGAP1-202ENST00000418600 UBE2BP63146 152 aa13.25□□□□□ -0.29
SYNGAP1-202ENST00000418600 SAMD5Q5TGI4 173 aa13.25□□□□□ -0.29
SYNGAP1-202ENST00000418600 VSIRQ9H7M9 311 aa13.25□□□□□ -0.29
SYNGAP1-202ENST00000418600 HIST1H4AP62805 103 aaKnown RBP13.24□□□□□ -0.29
SYNGAP1-202ENST00000418600 ANAPC13Q9BS18 74 aa13.24□□□□□ -0.29
SYNGAP1-202ENST00000418600 RNF152Q8N8N0 203 aa13.24□□□□□ -0.29
SYNGAP1-202ENST00000418600 DENND4CQ5VZ89 1909 aa13.24□□□□□ -0.29
SYNGAP1-202ENST00000418600 YLPM1P49750 1951 aaKnown RBP13.24□□□□□ -0.29
SYNGAP1-202ENST00000418600 H3BMM0 161 aa13.24□□□□□ -0.29
SYNGAP1-202ENST00000418600 SFTA2Q6UW10 78 aa13.24□□□□□ -0.29
SYNGAP1-202ENST00000418600 SNHG12Q9BXW3 62 aa13.24□□□□□ -0.29
SYNGAP1-202ENST00000418600 CT83Q5H943 113 aa13.24□□□□□ -0.29
SYNGAP1-202ENST00000418600 NEGR1Q7Z3B1 354 aa13.24□□□□□ -0.29
SYNGAP1-202ENST00000418600 BBC3Q96PG8 261 aaPredicted RBP13.24□□□□□ -0.29
SYNGAP1-202ENST00000418600 NDUFAF3Q9BU61 184 aa13.24□□□□□ -0.29
SYNGAP1-202ENST00000418600 FNDC4Q9H6D8 234 aaPredicted RBP13.24□□□□□ -0.29
SYNGAP1-202ENST00000418600 PYGO2Q9BRQ0 406 aa13.24□□□□□ -0.29
SYNGAP1-202ENST00000418600 ANXA2RQ3ZCQ2 193 aa13.23□□□□□ -0.29
SYNGAP1-202ENST00000418600 FREM3P0C091 2139 aa13.23□□□□□ -0.29
SYNGAP1-202ENST00000418600 USF3Q68DE3 2245 aa13.23□□□□□ -0.29
SYNGAP1-202ENST00000418600 Q6ZQT7 251 aa13.23□□□□□ -0.29
SYNGAP1-202ENST00000418600 MEGF9Q9H1U4 602 aa13.23□□□□□ -0.29
SYNGAP1-202ENST00000418600 TNFRSF6BO95407 300 aa13.23□□□□□ -0.29
SYNGAP1-202ENST00000418600 IGKV1-39P01597 117 aa13.23□□□□□ -0.29
SYNGAP1-202ENST00000418600 IGKV1D-39P04432 117 aa13.23□□□□□ -0.29
SYNGAP1-202ENST00000418600 Q86TA4 180 aa13.23□□□□□ -0.29
SYNGAP1-202ENST00000418600 GSN-AS1Q9NRJ2 163 aa13.23□□□□□ -0.29
SYNGAP1-202ENST00000418600 NCR2O95944 276 aa13.22□□□□□ -0.29
SYNGAP1-202ENST00000418600 IGHV3-30P01768 117 aa13.22□□□□□ -0.29
SYNGAP1-202ENST00000418600 IGHV3-33P01772 117 aa13.22□□□□□ -0.29
SYNGAP1-202ENST00000418600 IGHV3-30-3P0DP02 117 aa13.22□□□□□ -0.29
SYNGAP1-202ENST00000418600 IGHV3-30-5P0DP03 117 aa13.22□□□□□ -0.29
SYNGAP1-202ENST00000418600 TRBV19A0A075B6N1 114 aa13.22□□□□□ -0.29
SYNGAP1-202ENST00000418600 CHAC1Q9BUX1 264 aa13.22□□□□□ -0.29
SYNGAP1-202ENST00000418600 GFRA4Q9GZZ7 299 aa13.22□□□□□ -0.29
SYNGAP1-202ENST00000418600 WFDC1Q9HC57 220 aa13.22□□□□□ -0.29
SYNGAP1-202ENST00000418600 IGHV1-24A0A0C4DH33 117 aa13.22□□□□□ -0.29
SYNGAP1-202ENST00000418600 A0A0G2JRQ6 117 aa13.22□□□□□ -0.29
SYNGAP1-202ENST00000418600 MRPL53Q96EL3 112 aaKnown RBP13.22□□□□□ -0.29
SYNGAP1-202ENST00000418600 IGHV3-38A0A0C4DH36 116 aa13.21□□□□□ -0.29
SYNGAP1-202ENST00000418600 ZNF493Q6ZR52 646 aa13.21□□□□□ -0.29
SYNGAP1-202ENST00000418600 AGMATQ9BSE5 352 aa13.21□□□□□ -0.29
SYNGAP1-202ENST00000418600 NPC2P61916 151 aa13.21□□□□□ -0.29
SYNGAP1-202ENST00000418600 C2orf82Q6UX34 121 aa13.21□□□□□ -0.29
SYNGAP1-202ENST00000418600 IGLV3-1P01715 115 aa13.21□□□□□ -0.29
SYNGAP1-202ENST00000418600 LYL1P12980 280 aa13.21□□□□□ -0.29
SYNGAP1-202ENST00000418600 RSPO3Q9BXY4 272 aaPredicted RBP13.21□□□□□ -0.29
SYNGAP1-202ENST00000418600 GYPEP15421 78 aa13.21□□□□□ -0.3
SYNGAP1-202ENST00000418600 ZFAND6Q6FIF0 208 aa13.21□□□□□ -0.3
SYNGAP1-202ENST00000418600 CLPSL2Q6UWE3 100 aa13.21□□□□□ -0.3
SYNGAP1-202ENST00000418600 TMEM141Q96I45 108 aa13.21□□□□□ -0.3
SYNGAP1-202ENST00000418600 SIGMAR1Q99720 223 aa13.21□□□□□ -0.3
SYNGAP1-202ENST00000418600 TRBV24-1A0A075B6N3 115 aa13.2□□□□□ -0.3
SYNGAP1-202ENST00000418600 TRAV8-1A0A0A6YYK1 113 aa13.2□□□□□ -0.3
SYNGAP1-202ENST00000418600 ZNF407Q9C0G0 2248 aa13.2□□□□□ -0.3
SYNGAP1-202ENST00000418600 DOCK9Q9BZ29 2069 aa13.2□□□□□ -0.3
SYNGAP1-202ENST00000418600 PCP4P48539 62 aa13.2□□□□□ -0.3
SYNGAP1-202ENST00000418600 RITA1Q96K30 269 aa13.2□□□□□ -0.3
SYNGAP1-202ENST00000418600 ESM1Q9NQ30 184 aa13.2□□□□□ -0.3
SYNGAP1-202ENST00000418600 LY6G6CO95867 125 aa13.2□□□□□ -0.3
SYNGAP1-202ENST00000418600 GPHB5Q86YW7 130 aa13.2□□□□□ -0.3
SYNGAP1-202ENST00000418600 UBE2WQ96B02 151 aa13.2□□□□□ -0.3
SYNGAP1-202ENST00000418600 I3L3M4 83 aa13.2□□□□□ -0.3
SYNGAP1-202ENST00000418600 F6UB75 175 aa13.19□□□□□ -0.3
SYNGAP1-202ENST00000418600 GAGE2BQ13066 116 aa13.19□□□□□ -0.3
SYNGAP1-202ENST00000418600 PTPRSQ13332 1948 aa13.19□□□□□ -0.3
SYNGAP1-202ENST00000418600 IGLC1P0CG04 106 aa13.19□□□□□ -0.3
SYNGAP1-202ENST00000418600 ZGRF1Q86YA3 2104 aa13.19□□□□□ -0.3
SYNGAP1-202ENST00000418600 MED12Q93074 2177 aa13.18□□□□□ -0.3
SYNGAP1-202ENST00000418600 TMEM14CQ9P0S9 112 aa13.18□□□□□ -0.3
SYNGAP1-202ENST00000418600 K7EMT4 169 aa13.17□□□□□ -0.3
SYNGAP1-202ENST00000418600 ZNF318Q5VUA4 2279 aa13.17□□□□□ -0.3
SYNGAP1-202ENST00000418600 IGLC7A0M8Q6 106 aa13.17□□□□□ -0.3
SYNGAP1-202ENST00000418600 Q6ZWC4 215 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms