RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ZNF415Q09FC8 603 aa10.08□□□□□ -0.8
RPS28-201ENST00000417088 NEGR1Q7Z3B1 354 aa10.08□□□□□ -0.8
RPS28-201ENST00000417088 PHYHIPLQ96FC7 376 aa10.08□□□□□ -0.8
RPS28-201ENST00000417088 PAXXQ9BUH6 204 aa10.08□□□□□ -0.8
RPS28-201ENST00000417088 CCDC32Q9BV29 185 aa10.08□□□□□ -0.8
RPS28-201ENST00000417088 MRPL32Q9BYC8 188 aaKnown RBP10.08□□□□□ -0.8
RPS28-201ENST00000417088 FAM240BA0A1B0GVZ2 78 aa10.07□□□□□ -0.8
RPS28-201ENST00000417088 EPM2AB3EWF7 344 aa10.07□□□□□ -0.8
RPS28-201ENST00000417088 XGP55808 180 aa10.07□□□□□ -0.8
RPS28-201ENST00000417088 ZNF266Q14584 549 aa10.07□□□□□ -0.8
RPS28-201ENST00000417088 MUC21Q5SSG8 566 aa10.07□□□□□ -0.8
RPS28-201ENST00000417088 CDPF1Q6NVV7 123 aa10.07□□□□□ -0.8
RPS28-201ENST00000417088 NFE4Q86UQ8 179 aa10.07□□□□□ -0.8
RPS28-201ENST00000417088 MDFICQ9P1T7 246 aa10.07□□□□□ -0.8
RPS28-201ENST00000417088 TRGV4A0A0C4DH28 118 aa10.06□□□□□ -0.8
RPS28-201ENST00000417088 RBAKDNA6NC62 111 aa10.06□□□□□ -0.8
RPS28-201ENST00000417088 E5RGE8 158 aa10.06□□□□□ -0.8
RPS28-201ENST00000417088 SIX6O95475 246 aa10.06□□□□□ -0.8
RPS28-201ENST00000417088 SFTA3P0C7M3 94 aa10.06□□□□□ -0.8
RPS28-201ENST00000417088 DNAH10OSP0CZ25 163 aa10.06□□□□□ -0.8
RPS28-201ENST00000417088 IQCF2Q8IXL9 164 aa10.06□□□□□ -0.8
RPS28-201ENST00000417088 LYPD1Q8N2G4 141 aa10.06□□□□□ -0.8
RPS28-201ENST00000417088 ZNF479Q96JC4 524 aa10.06□□□□□ -0.8
RPS28-201ENST00000417088 WDR61Q9GZS3 305 aaKnown RBP10.06□□□□□ -0.8
RPS28-201ENST00000417088 SLC25A31Q9H0C2 315 aa10.06□□□□□ -0.8
RPS28-201ENST00000417088 OR5AC2Q9NZP5 309 aa10.06□□□□□ -0.8
RPS28-201ENST00000417088 LY96Q9Y6Y9 160 aa10.06□□□□□ -0.8
RPS28-201ENST00000417088 TRAV9-2A0A087WT02 112 aa10.05□□□□□ -0.8
RPS28-201ENST00000417088 A0A087WTM6 91 aa10.05□□□□□ -0.8
RPS28-201ENST00000417088 H0YIZ8 118 aa10.05□□□□□ -0.8
RPS28-201ENST00000417088 K7EQD1 137 aa10.05□□□□□ -0.8
RPS28-201ENST00000417088 CSN1S1P47710 185 aa10.05□□□□□ -0.8
RPS28-201ENST00000417088 RANP62826 216 aaKnown RBP10.05□□□□□ -0.8
RPS28-201ENST00000417088 WFDC10BQ8IUB3 73 aa10.05□□□□□ -0.8
RPS28-201ENST00000417088 OR10G4Q8NGN3 311 aa10.05□□□□□ -0.8
RPS28-201ENST00000417088 RASL10AQ92737 203 aa10.05□□□□□ -0.8
RPS28-201ENST00000417088 KCNIP2Q9NS61 270 aa10.05□□□□□ -0.8
RPS28-201ENST00000417088 PTTG2Q9NZH5 202 aa10.05□□□□□ -0.8
RPS28-201ENST00000417088 OR7C2O60412 319 aa10.04□□□□□ -0.8
RPS28-201ENST00000417088 SRIP30626 198 aa10.04□□□□□ -0.8
RPS28-201ENST00000417088 KRTAP10-1P60331 282 aa10.04□□□□□ -0.8
RPS28-201ENST00000417088 Q6AWC8 147 aa10.04□□□□□ -0.8
RPS28-201ENST00000417088 MZT2BQ6NZ67 158 aa10.04□□□□□ -0.8
RPS28-201ENST00000417088 MSRB1Q9NZV6 116 aa10.04□□□□□ -0.8
RPS28-201ENST00000417088 GYPEP15421 78 aa10.03□□□□□ -0.8
RPS28-201ENST00000417088 ASAH1Q13510 395 aa10.03□□□□□ -0.8
RPS28-201ENST00000417088 TMEM183BQ1AE95 376 aa10.03□□□□□ -0.8
RPS28-201ENST00000417088 LRRC37A5PQ49AS3 106 aa10.03□□□□□ -0.8
RPS28-201ENST00000417088 TMEM183AQ8IXX5 376 aa10.03□□□□□ -0.8
RPS28-201ENST00000417088 SPXQ9BT56 116 aa10.03□□□□□ -0.8
RPS28-201ENST00000417088 NMES1Q9C002 83 aa10.03□□□□□ -0.8
RPS28-201ENST00000417088 NDUFA13Q9P0J0 144 aa10.03□□□□□ -0.8
RPS28-201ENST00000417088 DMBT1Q9UGM3 2413 aaPredicted RBP10.03□□□□□ -0.8
RPS28-201ENST00000417088 TRGV11A0A075B6L2 103 aa10.02□□□□□ -0.81
RPS28-201ENST00000417088 DIRC3C9JPN6 131 aa10.02□□□□□ -0.81
RPS28-201ENST00000417088 C17orf112F2Z3M2 114 aa10.02□□□□□ -0.81
RPS28-201ENST00000417088 K7EP13 123 aa10.02□□□□□ -0.81
RPS28-201ENST00000417088 ORM1P02763 201 aa10.02□□□□□ -0.81
RPS28-201ENST00000417088 INAFM2P0DMQ5 153 aa10.02□□□□□ -0.81
RPS28-201ENST00000417088 UBE2L3P68036 154 aaKnown RBP10.02□□□□□ -0.81
RPS28-201ENST00000417088 PCNPQ8WW12 178 aaKnown RBP10.02□□□□□ -0.81
RPS28-201ENST00000417088 LENEPQ9Y5L5 61 aa10.02□□□□□ -0.81
RPS28-201ENST00000417088 IFNA5P01569 189 aa10.01□□□□□ -0.81
RPS28-201ENST00000417088 EVI2AP22794 236 aa10.01□□□□□ -0.81
RPS28-201ENST00000417088 FAM159AQ6UWV7 190 aa10.01□□□□□ -0.81
RPS28-201ENST00000417088 TRAV4A0A0B4J268 109 aa10□□□□□ -0.81
RPS28-201ENST00000417088 CYCSP99999 105 aaKnown RBP10□□□□□ -0.81
RPS28-201ENST00000417088 TDRG1Q3Y452 100 aa10□□□□□ -0.81
RPS28-201ENST00000417088 FFAR4Q5NUL3 377 aa10□□□□□ -0.81
RPS28-201ENST00000417088 TMED6Q8WW62 240 aa10□□□□□ -0.81
RPS28-201ENST00000417088 ATP5SQ99766 215 aa10□□□□□ -0.81
RPS28-201ENST00000417088 VPS13BQ7Z7G8 4022 aa9.99□□□□□ -0.81
RPS28-201ENST00000417088 LOC100131303A0A0U1RQF7 123 aa9.99□□□□□ -0.81
RPS28-201ENST00000417088 C9JCJ5 164 aa9.99□□□□□ -0.81
RPS28-201ENST00000417088 GNRH2O43555 120 aa9.99□□□□□ -0.81
RPS28-201ENST00000417088 EIF3GO75821 320 aaKnown RBP eCLIP9.99□□□□□ -0.816e-11■■■■□ 19.9
RPS28-201ENST00000417088 KHDC3LQ587J8 217 aa9.99□□□□□ -0.81
RPS28-201ENST00000417088 Q5VSD8 79 aa9.99□□□□□ -0.81
RPS28-201ENST00000417088 OR4C5Q8NGB2 326 aa9.99□□□□□ -0.81
RPS28-201ENST00000417088 HYLS1Q96M11 299 aa9.99□□□□□ -0.81
RPS28-201ENST00000417088 TXNDC17Q9BRA2 123 aa9.99□□□□□ -0.81
RPS28-201ENST00000417088 NAGKQ9UJ70 344 aa9.99□□□□□ -0.81
RPS28-201ENST00000417088 IGHV3-16A0A0C4DH30 117 aa9.98□□□□□ -0.81
RPS28-201ENST00000417088 PGPA6NDG6 321 aa9.98□□□□□ -0.81
RPS28-201ENST00000417088 M0R2P5 195 aa9.98□□□□□ -0.81
RPS28-201ENST00000417088 CRYGDP07320 174 aa9.98□□□□□ -0.81
RPS28-201ENST00000417088 GCSHP23434 173 aa9.98□□□□□ -0.81
RPS28-201ENST00000417088 H2BFSP57053 126 aa9.98□□□□□ -0.81
RPS28-201ENST00000417088 TAS2R45P59539 299 aa9.98□□□□□ -0.81
RPS28-201ENST00000417088 LINC00299Q6ZSB3 139 aa9.98□□□□□ -0.81
RPS28-201ENST00000417088 ENKURQ8TC29 256 aa9.98□□□□□ -0.81
RPS28-201ENST00000417088 PPP1R1CQ8WVI7 109 aa9.98□□□□□ -0.81
RPS28-201ENST00000417088 FRZBQ92765 325 aa9.98□□□□□ -0.81
RPS28-201ENST00000417088 OTORQ9NRC9 128 aa9.98□□□□□ -0.81
RPS28-201ENST00000417088 HSPB11Q9Y547 144 aa9.98□□□□□ -0.81
RPS28-201ENST00000417088 MYCBP2O75592 4640 aa9.97□□□□□ -0.81
RPS28-201ENST00000417088 C10orf126Q8N4M7 172 aa9.97□□□□□ -0.81
RPS28-201ENST00000417088 CMTM2Q8TAZ6 248 aa9.97□□□□□ -0.81
RPS28-201ENST00000417088 TVP23CQ96ET8 276 aa9.97□□□□□ -0.81
RPS28-201ENST00000417088 MBD2Q9UBB5 411 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms