RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	IGKV2D-24	A0A075B6R9	120 aa		5.44	□□□□□ -1.54
NIF3L1-206	ENST00000416651		C9JCJ5	164 aa		5.44	□□□□□ -1.54
NIF3L1-206	ENST00000416651		H3BP45	60 aa		5.44	□□□□□ -1.54
NIF3L1-206	ENST00000416651	TMEM127	O75204	238 aa		5.44	□□□□□ -1.54
NIF3L1-206	ENST00000416651	IL5	P05113	134 aa		5.44	□□□□□ -1.54
NIF3L1-206	ENST00000416651	OR4E1	P0C645	316 aa		5.44	□□□□□ -1.54
NIF3L1-206	ENST00000416651	RAP2B	P61225	183 aa		5.44	□□□□□ -1.54
NIF3L1-206	ENST00000416651	AKR1C1	Q04828	323 aa		5.44	□□□□□ -1.54
NIF3L1-206	ENST00000416651	FOXI1	Q12951	378 aa		5.44	□□□□□ -1.54
NIF3L1-206	ENST00000416651	SMCO1	Q147U7	214 aa		5.44	□□□□□ -1.54
NIF3L1-206	ENST00000416651	RNASE10	Q5GAN6	216 aa	Known RBP	5.44	□□□□□ -1.54
NIF3L1-206	ENST00000416651	LCN15	Q6UWW0	184 aa		5.44	□□□□□ -1.54
NIF3L1-206	ENST00000416651	OR52I2	Q8NH67	350 aa		5.44	□□□□□ -1.54
NIF3L1-206	ENST00000416651	TERB2	Q8NHR7	220 aa		5.44	□□□□□ -1.54
NIF3L1-206	ENST00000416651	ZFAND1	Q8TCF1	268 aa		5.44	□□□□□ -1.54
NIF3L1-206	ENST00000416651	ODF3	Q96PU9	254 aa		5.44	□□□□□ -1.54
NIF3L1-206	ENST00000416651	IGHV3-73	A0A0B4J1V6	119 aa		5.43	□□□□□ -1.54
NIF3L1-206	ENST00000416651	PHOX2A	O14813	284 aa		5.43	□□□□□ -1.54
NIF3L1-206	ENST00000416651	CFD	P00746	253 aa	Predicted RBP	5.43	□□□□□ -1.54
NIF3L1-206	ENST00000416651	CHTF8	P0CG12	524 aa		5.43	□□□□□ -1.54
NIF3L1-206	ENST00000416651	IGLC2	P0DOY2	106 aa		5.43	□□□□□ -1.54
NIF3L1-206	ENST00000416651	GATA1	P15976	413 aa	Predicted RBP	5.43	□□□□□ -1.54
NIF3L1-206	ENST00000416651	CCR6	P51684	374 aa		5.43	□□□□□ -1.54
NIF3L1-206	ENST00000416651	PLP1	P60201	277 aa		5.43	□□□□□ -1.54
NIF3L1-206	ENST00000416651	TDRG1	Q3Y452	100 aa		5.43	□□□□□ -1.54
NIF3L1-206	ENST00000416651	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	5.43	□□□□□ -1.54
NIF3L1-206	ENST00000416651	SLC25A29	Q8N8R3	303 aa		5.43	□□□□□ -1.54
NIF3L1-206	ENST00000416651	SLC50A1	Q9BRV3	221 aa		5.43	□□□□□ -1.54
NIF3L1-206	ENST00000416651	ARV1	Q9H2C2	271 aa		5.43	□□□□□ -1.54
NIF3L1-206	ENST00000416651	DPH3P1	Q9H4G8	78 aa		5.43	□□□□□ -1.54
NIF3L1-206	ENST00000416651	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	5.42	□□□□□ -1.54
NIF3L1-206	ENST00000416651	TRAV8-3	A0A0A6YYJ7	113 aa		5.42	□□□□□ -1.54
NIF3L1-206	ENST00000416651	SMCO3	A2RU48	225 aa		5.42	□□□□□ -1.54
NIF3L1-206	ENST00000416651	FAM25A	B3EWG3	89 aa		5.42	□□□□□ -1.54
NIF3L1-206	ENST00000416651	FAM25C	B3EWG5	89 aa		5.42	□□□□□ -1.54
NIF3L1-206	ENST00000416651	FAM25G	B3EWG6	89 aa		5.42	□□□□□ -1.54
NIF3L1-206	ENST00000416651	WRB	O00258	174 aa		5.42	□□□□□ -1.54
NIF3L1-206	ENST00000416651	PITX3	O75364	302 aa		5.42	□□□□□ -1.54
NIF3L1-206	ENST00000416651	IGKV2D-40	P01614	121 aa	Predicted RBP	5.42	□□□□□ -1.54
NIF3L1-206	ENST00000416651	GPX1	P07203	203 aa		5.42	□□□□□ -1.54
NIF3L1-206	ENST00000416651	PRSS1	P07477	247 aa		5.42	□□□□□ -1.54
NIF3L1-206	ENST00000416651	LSM3	P62310	102 aa	Known RBP	5.42	□□□□□ -1.54
NIF3L1-206	ENST00000416651	CT83	Q5H943	113 aa		5.42	□□□□□ -1.54
NIF3L1-206	ENST00000416651	DPPA3	Q6W0C5	159 aa		5.42	□□□□□ -1.54
NIF3L1-206	ENST00000416651	OR4C5	Q8NGB2	326 aa		5.42	□□□□□ -1.54
NIF3L1-206	ENST00000416651	ATP6V0E2	Q8NHE4	81 aa		5.42	□□□□□ -1.54
NIF3L1-206	ENST00000416651	RASL10A	Q92737	203 aa		5.42	□□□□□ -1.54
NIF3L1-206	ENST00000416651	COMMD3	Q9UBI1	195 aa		5.42	□□□□□ -1.54
NIF3L1-206	ENST00000416651	GPR132	Q9UNW8	380 aa		5.42	□□□□□ -1.54
NIF3L1-206	ENST00000416651	KIF25-AS1	Q9Y6Z4	181 aa		5.42	□□□□□ -1.54
NIF3L1-206	ENST00000416651	TRAV4	A0A0B4J268	109 aa		5.41	□□□□□ -1.54
NIF3L1-206	ENST00000416651	GNRH2	O43555	120 aa		5.41	□□□□□ -1.54
NIF3L1-206	ENST00000416651	HPGDS	O60760	199 aa		5.41	□□□□□ -1.54
NIF3L1-206	ENST00000416651	SCGB1D1	O95968	90 aa		5.41	□□□□□ -1.54
NIF3L1-206	ENST00000416651	PTTG1	O95997	202 aa		5.41	□□□□□ -1.54
NIF3L1-206	ENST00000416651	CXCL2	P19875	107 aa		5.41	□□□□□ -1.54
NIF3L1-206	ENST00000416651	RRAS2	P62070	204 aa	Predicted RBP	5.41	□□□□□ -1.54
NIF3L1-206	ENST00000416651	RAB11A	P62491	216 aa		5.41	□□□□□ -1.54
NIF3L1-206	ENST00000416651	SLC38A11	Q08AI6	406 aa		5.41	□□□□□ -1.54
NIF3L1-206	ENST00000416651	TMEM183B	Q1AE95	376 aa		5.41	□□□□□ -1.54
NIF3L1-206	ENST00000416651	SPANXN5	Q5MJ07	72 aa		5.41	□□□□□ -1.54
NIF3L1-206	ENST00000416651	SDIM1	Q6ZPB5	146 aa		5.41	□□□□□ -1.54
NIF3L1-206	ENST00000416651	LINC00305	Q7Z4B0	112 aa		5.41	□□□□□ -1.54
NIF3L1-206	ENST00000416651	TMEM183A	Q8IXX5	376 aa		5.41	□□□□□ -1.54
NIF3L1-206	ENST00000416651	MCFD2	Q8NI22	146 aa		5.41	□□□□□ -1.54
NIF3L1-206	ENST00000416651		Q8TAT8	98 aa		5.41	□□□□□ -1.54
NIF3L1-206	ENST00000416651	FUNDC2	Q9BWH2	189 aa		5.41	□□□□□ -1.54
NIF3L1-206	ENST00000416651	KLK12	Q9UKR0	248 aa		5.41	□□□□□ -1.54
NIF3L1-206	ENST00000416651	NDUFB4	O95168	129 aa		5.4	□□□□□ -1.54
NIF3L1-206	ENST00000416651	CRISP2	P16562	243 aa		5.4	□□□□□ -1.54
NIF3L1-206	ENST00000416651	EXOC3-AS1	Q8N2X6	119 aa		5.4	□□□□□ -1.54
NIF3L1-206	ENST00000416651	SOST	Q9BQB4	213 aa		5.4	□□□□□ -1.54
NIF3L1-206	ENST00000416651	GTSF1L	Q9H1H1	148 aa		5.4	□□□□□ -1.54
NIF3L1-206	ENST00000416651	C14orf166	Q9Y224	244 aa	Known RBP	5.4	□□□□□ -1.54
NIF3L1-206	ENST00000416651		A0A087WYN8	130 aa		5.39	□□□□□ -1.55
NIF3L1-206	ENST00000416651		A0A0D9SG52	128 aa		5.39	□□□□□ -1.55
NIF3L1-206	ENST00000416651	MUC21	A0A0G2JKD1	596 aa		5.39	□□□□□ -1.55
NIF3L1-206	ENST00000416651	RAB3D	O95716	219 aa		5.39	□□□□□ -1.55
NIF3L1-206	ENST00000416651	UBE2M	P61081	183 aa	Known RBP	5.39	□□□□□ -1.55
NIF3L1-206	ENST00000416651	SPANXN2	Q5MJ10	180 aa		5.39	□□□□□ -1.55
NIF3L1-206	ENST00000416651	WDR73	Q6P4I2	378 aa		5.39	□□□□□ -1.55
NIF3L1-206	ENST00000416651	C9orf163	Q8N9P6	203 aa		5.39	□□□□□ -1.55
NIF3L1-206	ENST00000416651	UBE2W	Q96B02	151 aa		5.39	□□□□□ -1.55
NIF3L1-206	ENST00000416651	NAA50	Q9GZZ1	169 aa	Known RBP	5.39	□□□□□ -1.55
NIF3L1-206	ENST00000416651	PXMP4	Q9Y6I8	212 aa		5.39	□□□□□ -1.55
NIF3L1-206	ENST00000416651		A0A0B4J2A0	478 aa		5.38	□□□□□ -1.55
NIF3L1-206	ENST00000416651	CENPX	A8MT69	81 aa		5.38	□□□□□ -1.55
NIF3L1-206	ENST00000416651	GGTLC3	B5MD39	225 aa		5.38	□□□□□ -1.55
NIF3L1-206	ENST00000416651	USP17L23	D6RBM5	183 aa		5.38	□□□□□ -1.55
NIF3L1-206	ENST00000416651	B3GALNT1	O75752	331 aa		5.38	□□□□□ -1.55
NIF3L1-206	ENST00000416651	UPK1B	O75841	260 aa		5.38	□□□□□ -1.55
NIF3L1-206	ENST00000416651	PFN1	P07737	140 aa	Known RBP	5.38	□□□□□ -1.55
NIF3L1-206	ENST00000416651	ATP5I	P56385	69 aa	Predicted RBP	5.38	□□□□□ -1.55
NIF3L1-206	ENST00000416651	SPCS2	Q15005	226 aa		5.38	□□□□□ -1.55
NIF3L1-206	ENST00000416651	VWC2	Q2TAL6	325 aa		5.38	□□□□□ -1.55
NIF3L1-206	ENST00000416651	ZFP69	Q49AA0	526 aa		5.38	□□□□□ -1.55
NIF3L1-206	ENST00000416651	BPIFA4P	Q86YQ2	179 aa		5.38	□□□□□ -1.55
NIF3L1-206	ENST00000416651	CCDC59	Q9P031	241 aa	Known RBP	5.38	□□□□□ -1.55
NIF3L1-206	ENST00000416651	MTFP1	Q9UDX5	166 aa		5.38	□□□□□ -1.55
NIF3L1-206	ENST00000416651	SHPK	Q9UHJ6	478 aa		5.38	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms