RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 PQLC2Q6ZP29 291 aa17.35■□□□□ 0.37
HLA-C-204ENST00000415537 C6orf223Q8N319 242 aa17.35■□□□□ 0.37
HLA-C-204ENST00000415537 OTORQ9NRC9 128 aa17.35■□□□□ 0.37
HLA-C-204ENST00000415537 PGPA6NDG6 321 aa17.34■□□□□ 0.37
HLA-C-204ENST00000415537 EIF3GO75821 320 aaKnown RBP eCLIP17.34■□□□□ 0.37
HLA-C-204ENST00000415537 PTTG1O95997 202 aa17.34■□□□□ 0.37
HLA-C-204ENST00000415537 ZNF415Q09FC8 603 aa17.34■□□□□ 0.37
HLA-C-204ENST00000415537 ZNF266Q14584 549 aa17.34■□□□□ 0.37
HLA-C-204ENST00000415537 RPH3ALQ9UNE2 315 aa17.34■□□□□ 0.37
HLA-C-204ENST00000415537 LENEPQ9Y5L5 61 aa17.34■□□□□ 0.37
HLA-C-204ENST00000415537 ESRGQ1W209 222 aa17.33■□□□□ 0.36
HLA-C-204ENST00000415537 OR10G4Q8NGN3 311 aa17.33■□□□□ 0.36
HLA-C-204ENST00000415537 OR10G9Q8NGN4 311 aa17.33■□□□□ 0.36
HLA-C-204ENST00000415537 OR10G7Q8NGN6 311 aa17.33■□□□□ 0.36
HLA-C-204ENST00000415537 MED28Q9H204 178 aa17.33■□□□□ 0.36
HLA-C-204ENST00000415537 RAB2AP61019 212 aa17.32■□□□□ 0.36
HLA-C-204ENST00000415537 MUC21Q5SSG8 566 aa17.32■□□□□ 0.36
HLA-C-204ENST00000415537 VSIG2Q96IQ7 327 aa17.32■□□□□ 0.36
HLA-C-204ENST00000415537 ST6GAL2Q96JF0 529 aa17.32■□□□□ 0.36
HLA-C-204ENST00000415537 MRPL16Q9NX20 251 aaKnown RBP17.32■□□□□ 0.36
HLA-C-204ENST00000415537 MUC4Q99102 2169 aa17.31■□□□□ 0.36
HLA-C-204ENST00000415537 MED14OSP0DP75 135 aa17.31■□□□□ 0.36
HLA-C-204ENST00000415537 FAM159AQ6UWV7 190 aa17.31■□□□□ 0.36
HLA-C-204ENST00000415537 TMED6Q8WW62 240 aa17.31■□□□□ 0.36
HLA-C-204ENST00000415537 UPK3BQ9BT76 320 aa17.31■□□□□ 0.36
HLA-C-204ENST00000415537 PKD1P98161 4303 aa17.3■□□□□ 0.36
HLA-C-204ENST00000415537 HERC2O95714 4834 aa17.3■□□□□ 0.36
HLA-C-204ENST00000415537 IGHV3-53P01767 116 aa17.3■□□□□ 0.36
HLA-C-204ENST00000415537 TTC32Q5I0X7 151 aa17.3■□□□□ 0.36
HLA-C-204ENST00000415537 Q6AWC8 147 aa17.3■□□□□ 0.36
HLA-C-204ENST00000415537 MRPS16Q9Y3D3 137 aaKnown RBP17.3■□□□□ 0.36
HLA-C-204ENST00000415537 A0A096LPF7 62 aa17.29■□□□□ 0.36
HLA-C-204ENST00000415537 HMGB3O15347 200 aaKnown RBP17.29■□□□□ 0.36
HLA-C-204ENST00000415537 PAX4O43316 350 aa17.29■□□□□ 0.36
HLA-C-204ENST00000415537 PKHD1P08F94 4074 aa17.29■□□□□ 0.36
HLA-C-204ENST00000415537 KIAA1109Q2LD37 5005 aa17.28■□□□□ 0.36
HLA-C-204ENST00000415537 CDC34P49427 236 aaPredicted RBP17.28■□□□□ 0.36
HLA-C-204ENST00000415537 TNP2Q05952 138 aa17.28■□□□□ 0.36
HLA-C-204ENST00000415537 SLAQ13239 276 aa17.28■□□□□ 0.36
HLA-C-204ENST00000415537 GOLT1AQ6ZVE7 132 aa17.28■□□□□ 0.36
HLA-C-204ENST00000415537 ARL6IP6Q8N6S5 226 aa17.28■□□□□ 0.36
HLA-C-204ENST00000415537 HSD17B11Q8NBQ5 300 aa17.28■□□□□ 0.36
HLA-C-204ENST00000415537 TRGV11A0A075B6L2 103 aa17.27■□□□□ 0.36
HLA-C-204ENST00000415537 TMEM183BQ1AE95 376 aa17.27■□□□□ 0.36
HLA-C-204ENST00000415537 TMEM183AQ8IXX5 376 aa17.27■□□□□ 0.36
HLA-C-204ENST00000415537 AQP10Q96PS8 301 aa17.27■□□□□ 0.36
HLA-C-204ENST00000415537 MDFICQ9P1T7 246 aa17.27■□□□□ 0.36
HLA-C-204ENST00000415537 PRO0255Q9UI72 69 aa17.27■□□□□ 0.36
HLA-C-204ENST00000415537 ICOSQ9Y6W8 199 aa17.27■□□□□ 0.36
HLA-C-204ENST00000415537 OR2G3Q8NGZ4 309 aa17.26■□□□□ 0.35
HLA-C-204ENST00000415537 NAGKQ9UJ70 344 aa17.26■□□□□ 0.35
HLA-C-204ENST00000415537 ARL14EPLP0DKL9 152 aa17.25■□□□□ 0.35
HLA-C-204ENST00000415537 SPXQ9BT56 116 aa17.25■□□□□ 0.35
HLA-C-204ENST00000415537 PSMG3Q9BT73 122 aaPredicted RBP17.25■□□□□ 0.35
HLA-C-204ENST00000415537 HHLA3Q9XRX5 114 aa17.25■□□□□ 0.35
HLA-C-204ENST00000415537 A0A1W2PPQ1 181 aa17.24■□□□□ 0.35
HLA-C-204ENST00000415537 MBP02144 154 aa17.24■□□□□ 0.35
HLA-C-204ENST00000415537 TRGV4A0A0C4DH28 118 aa17.23■□□□□ 0.35
HLA-C-204ENST00000415537 STAG3L2P0CL84 134 aa17.23■□□□□ 0.35
HLA-C-204ENST00000415537 STAG3L3P0CL85 134 aa17.23■□□□□ 0.35
HLA-C-204ENST00000415537 ATP6V0CP27449 155 aa17.23■□□□□ 0.35
HLA-C-204ENST00000415537 GNG5P63218 68 aa17.23■□□□□ 0.35
HLA-C-204ENST00000415537 SERF2P84101 59 aa17.23■□□□□ 0.35
HLA-C-204ENST00000415537 ZNF575Q86XF7 245 aa17.23■□□□□ 0.35
HLA-C-204ENST00000415537 INO80EQ8NBZ0 244 aaPredicted RBP17.23■□□□□ 0.35
HLA-C-204ENST00000415537 ASB13Q8WXK3 278 aa17.23■□□□□ 0.35
HLA-C-204ENST00000415537 TREM1Q9NP99 234 aa17.23■□□□□ 0.35
HLA-C-204ENST00000415537 TRAV21A0A0B4J279 112 aa17.22■□□□□ 0.35
HLA-C-204ENST00000415537 GIPP09681 153 aaPredicted RBP17.22■□□□□ 0.35
HLA-C-204ENST00000415537 CRYBA4P53673 196 aa17.22■□□□□ 0.35
HLA-C-204ENST00000415537 FHL2Q14192 279 aa17.22■□□□□ 0.35
HLA-C-204ENST00000415537 RAB24Q969Q5 203 aa17.22■□□□□ 0.35
HLA-C-204ENST00000415537 C8orf49Q96NF6 230 aa17.22■□□□□ 0.35
HLA-C-204ENST00000415537 TRAV8-1A0A0A6YYK1 113 aa17.21■□□□□ 0.35
HLA-C-204ENST00000415537 F6UZH7 168 aa17.21■□□□□ 0.35
HLA-C-204ENST00000415537 MRPL23Q16540 153 aaKnown RBP17.21■□□□□ 0.35
HLA-C-204ENST00000415537 TDRG1Q3Y452 100 aa17.21■□□□□ 0.35
HLA-C-204ENST00000415537 RASL10AQ92737 203 aa17.21■□□□□ 0.35
HLA-C-204ENST00000415537 NDFIP1Q9BT67 221 aa17.21■□□□□ 0.35
HLA-C-204ENST00000415537 KRTAP1-5Q9BYS1 174 aa17.21■□□□□ 0.35
HLA-C-204ENST00000415537 SERTM2A0A1B0GWG4 89 aa17.2■□□□□ 0.34
HLA-C-204ENST00000415537 K7EQM0 130 aa17.2■□□□□ 0.34
HLA-C-204ENST00000415537 Q5BKY6 102 aa17.2■□□□□ 0.34
HLA-C-204ENST00000415537 DNAH11Q96DT5 4516 aa17.19■□□□□ 0.34
HLA-C-204ENST00000415537 SIVA1O15304 175 aa17.19■□□□□ 0.34
HLA-C-204ENST00000415537 GNRH2O43555 120 aa17.19■□□□□ 0.34
HLA-C-204ENST00000415537 SFTA3P0C7M3 94 aa17.19■□□□□ 0.34
HLA-C-204ENST00000415537 GCHFRP30047 84 aa17.19■□□□□ 0.34
HLA-C-204ENST00000415537 C5orf17Q8NAS9 161 aa17.19■□□□□ 0.34
HLA-C-204ENST00000415537 ACTR3CQ9C0K3 210 aaPredicted RBP17.19■□□□□ 0.34
HLA-C-204ENST00000415537 DYNC1H1Q14204 4646 aaKnown RBP17.19■□□□□ 0.34
HLA-C-204ENST00000415537 C16orf90A8MZG2 172 aa17.18■□□□□ 0.34
HLA-C-204ENST00000415537 CXorf1O96002 111 aa17.18■□□□□ 0.34
HLA-C-204ENST00000415537 BTF3P20290 206 aaKnown RBP17.18■□□□□ 0.34
HLA-C-204ENST00000415537 IQCF2Q8IXL9 164 aa17.18■□□□□ 0.34
HLA-C-204ENST00000415537 TVP23CQ96ET8 276 aa17.18■□□□□ 0.34
HLA-C-204ENST00000415537 ZNF479Q96JC4 524 aa17.18■□□□□ 0.34
HLA-C-204ENST00000415537 KCNS1Q96KK3 526 aa17.18■□□□□ 0.34
HLA-C-204ENST00000415537 SGK494Q96LW2 274 aa17.18■□□□□ 0.34
HLA-C-204ENST00000415537 SH3BGRL3Q9H299 93 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms