RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 hCG_2014768A0A024R1R8 64 aa10.48□□□□□ -0.73
CHD1-202ENST00000414220 IGHV4-4A0A075B6R2 117 aa10.48□□□□□ -0.73
CHD1-202ENST00000414220 IGHV1OR15-1A0A075B7D0 117 aa10.48□□□□□ -0.73
CHD1-202ENST00000414220 F6UZH7 168 aa10.48□□□□□ -0.73
CHD1-202ENST00000414220 ATP5G1P05496 136 aa10.48□□□□□ -0.73
CHD1-202ENST00000414220 ATP5G3P48201 142 aa10.48□□□□□ -0.73
CHD1-202ENST00000414220 ZNF726P1Q15940 193 aa10.48□□□□□ -0.73
CHD1-202ENST00000414220 ANXA2RQ3ZCQ2 193 aa10.48□□□□□ -0.73
CHD1-202ENST00000414220 ZFP69Q49AA0 526 aa10.48□□□□□ -0.73
CHD1-202ENST00000414220 FAM159AQ6UWV7 190 aa10.48□□□□□ -0.73
CHD1-202ENST00000414220 CYB561D1Q8N8Q1 229 aa10.48□□□□□ -0.73
CHD1-202ENST00000414220 LINC00476Q8WZB0 136 aa10.48□□□□□ -0.73
CHD1-202ENST00000414220 TREM1Q9NP99 234 aa10.48□□□□□ -0.73
CHD1-202ENST00000414220 EPDR1Q9UM22 224 aa10.48□□□□□ -0.73
CHD1-202ENST00000414220 TEX46H3BTG2 121 aa10.47□□□□□ -0.73
CHD1-202ENST00000414220 FGF8P55075 233 aaPredicted RBP10.47□□□□□ -0.73
CHD1-202ENST00000414220 UBE2G2P60604 165 aa10.47□□□□□ -0.73
CHD1-202ENST00000414220 GNG5P63218 68 aa10.47□□□□□ -0.73
CHD1-202ENST00000414220 LGALSLQ3ZCW2 172 aaPredicted RBP10.47□□□□□ -0.73
CHD1-202ENST00000414220 LGALS9CQ6DKI2 356 aa10.47□□□□□ -0.73
CHD1-202ENST00000414220 SSX7Q7RTT5 188 aa10.47□□□□□ -0.73
CHD1-202ENST00000414220 FAM213BQ8TBF2 198 aa10.47□□□□□ -0.73
CHD1-202ENST00000414220 ATG101Q9BSB4 218 aa10.47□□□□□ -0.73
CHD1-202ENST00000414220 PLA2G2EQ9NZK7 142 aa10.47□□□□□ -0.73
CHD1-202ENST00000414220 TRAV21A0A0B4J279 112 aa10.46□□□□□ -0.73
CHD1-202ENST00000414220 PLAC8L1A1L4L8 177 aa10.46□□□□□ -0.73
CHD1-202ENST00000414220 RAB5CP51148 216 aa10.46□□□□□ -0.73
CHD1-202ENST00000414220 DAZ2Q13117 558 aaKnown RBP10.46□□□□□ -0.73
CHD1-202ENST00000414220 SAPCD1Q5SSQ6 148 aa10.46□□□□□ -0.73
CHD1-202ENST00000414220 IBA57Q5T440 356 aaKnown RBP10.46□□□□□ -0.73
CHD1-202ENST00000414220 SFT2D1Q8WV19 159 aa10.46□□□□□ -0.73
CHD1-202ENST00000414220 HIST1H2BAQ96A08 127 aa10.46□□□□□ -0.73
CHD1-202ENST00000414220 TCEAL7Q9BRU2 100 aa10.46□□□□□ -0.73
CHD1-202ENST00000414220 TMPRSS5Q9H3S3 457 aa10.46□□□□□ -0.73
CHD1-202ENST00000414220 APLNQ9ULZ1 77 aa10.46□□□□□ -0.73
CHD1-202ENST00000414220 TRGV11A0A075B6L2 103 aa10.45□□□□□ -0.74
CHD1-202ENST00000414220 H2AFB1P0C5Y9 115 aa10.45□□□□□ -0.74
CHD1-202ENST00000414220 FLI1Q01543 452 aaPredicted RBP10.45□□□□□ -0.74
CHD1-202ENST00000414220 ZNF415Q09FC8 603 aa10.45□□□□□ -0.74
CHD1-202ENST00000414220 Q6AWC8 147 aa10.45□□□□□ -0.74
CHD1-202ENST00000414220 SLC51BQ86UW2 128 aa10.45□□□□□ -0.74
CHD1-202ENST00000414220 PSG8Q9UQ74 426 aa10.45□□□□□ -0.74
CHD1-202ENST00000414220 ARL2-SNX15V9GYD0 113 aa10.45□□□□□ -0.74
CHD1-202ENST00000414220 TRAV8-1A0A0A6YYK1 113 aa10.44□□□□□ -0.74
CHD1-202ENST00000414220 FAM74A7A6NL05 159 aa10.44□□□□□ -0.74
CHD1-202ENST00000414220 GGTLC3B5MD39 225 aa10.44□□□□□ -0.74
CHD1-202ENST00000414220 F5H768 121 aa10.44□□□□□ -0.74
CHD1-202ENST00000414220 FHITP49789 147 aa10.44□□□□□ -0.74
CHD1-202ENST00000414220 PRR9Q5T870 116 aa10.44□□□□□ -0.74
CHD1-202ENST00000414220 CST9LP1Q5W188 147 aa10.44□□□□□ -0.74
CHD1-202ENST00000414220 PRNTQ86SH4 94 aa10.44□□□□□ -0.74
CHD1-202ENST00000414220 TMEM75Q8N9X5 138 aa10.44□□□□□ -0.74
CHD1-202ENST00000414220 MBD3L1Q8WWY6 194 aa10.44□□□□□ -0.74
CHD1-202ENST00000414220 KCNS1Q96KK3 526 aa10.44□□□□□ -0.74
CHD1-202ENST00000414220 GSN-AS1Q9NRJ2 163 aa10.44□□□□□ -0.74
CHD1-202ENST00000414220 TRGV2A0A075B6R0 118 aa10.43□□□□□ -0.74
CHD1-202ENST00000414220 GAGE12BA1L429 117 aa10.43□□□□□ -0.74
CHD1-202ENST00000414220 GAGE7O76087 117 aa10.43□□□□□ -0.74
CHD1-202ENST00000414220 GAGE12FP0CL80 117 aa10.43□□□□□ -0.74
CHD1-202ENST00000414220 GAGE12GP0CL81 117 aa10.43□□□□□ -0.74
CHD1-202ENST00000414220 GAGE12IP0CL82 117 aa10.43□□□□□ -0.74
CHD1-202ENST00000414220 P0DMU3 169 aa10.43□□□□□ -0.74
CHD1-202ENST00000414220 FAM231AP0DMU4 169 aa10.43□□□□□ -0.74
CHD1-202ENST00000414220 FAM231CP0DMU5 169 aa10.43□□□□□ -0.74
CHD1-202ENST00000414220 TCL1AP56279 114 aa10.43□□□□□ -0.74
CHD1-202ENST00000414220 SMUG1Q53HV7 270 aa10.43□□□□□ -0.74
CHD1-202ENST00000414220 MUC21Q5SSG8 566 aa10.43□□□□□ -0.74
CHD1-202ENST00000414220 C15orf53Q8NAA6 179 aa10.43□□□□□ -0.74
CHD1-202ENST00000414220 SGK494Q96LW2 274 aa10.43□□□□□ -0.74
CHD1-202ENST00000414220 NAGKQ9UJ70 344 aa10.43□□□□□ -0.74
CHD1-202ENST00000414220 STARD9Q9P2P6 4700 aa10.42□□□□□ -0.74
CHD1-202ENST00000414220 PEX7O00628 323 aa10.42□□□□□ -0.74
CHD1-202ENST00000414220 UBE2G1P62253 170 aa10.42□□□□□ -0.74
CHD1-202ENST00000414220 LGALS9BQ3B8N2 356 aa10.42□□□□□ -0.74
CHD1-202ENST00000414220 SPXQ9BT56 116 aa10.42□□□□□ -0.74
CHD1-202ENST00000414220 KMT2CQ8NEZ4 4911 aaKnown RBP10.42□□□□□ -0.74
CHD1-202ENST00000414220 TRGV1A0A0A0MS02 117 aa10.41□□□□□ -0.74
CHD1-202ENST00000414220 C11orf72Q8NBR9 251 aa10.41□□□□□ -0.74
CHD1-202ENST00000414220 SDF2L1Q9HCN8 221 aa10.41□□□□□ -0.74
CHD1-202ENST00000414220 KLF12Q9Y4X4 402 aa10.41□□□□□ -0.74
CHD1-202ENST00000414220 TENM2Q9NT68 2774 aa10.41□□□□□ -0.74
CHD1-202ENST00000414220 PAGE4O60829 102 aa10.4□□□□□ -0.74
CHD1-202ENST00000414220 GCGP01275 180 aa10.4□□□□□ -0.74
CHD1-202ENST00000414220 OR5I1Q13606 314 aa10.4□□□□□ -0.74
CHD1-202ENST00000414220 TMEM183BQ1AE95 376 aa10.4□□□□□ -0.74
CHD1-202ENST00000414220 TDRG1Q3Y452 100 aa10.4□□□□□ -0.74
CHD1-202ENST00000414220 TMEM88Q6PEY1 159 aa10.4□□□□□ -0.74
CHD1-202ENST00000414220 UBE2DNLQ8IWF7 75 aa10.4□□□□□ -0.74
CHD1-202ENST00000414220 TMEM183AQ8IXX5 376 aa10.4□□□□□ -0.74
CHD1-202ENST00000414220 LINC00612Q8N6U2 182 aa10.4□□□□□ -0.74
CHD1-202ENST00000414220 FMC1Q96HJ9 113 aa10.4□□□□□ -0.74
CHD1-202ENST00000414220 ZFP30Q9Y2G7 519 aa10.4□□□□□ -0.74
CHD1-202ENST00000414220 CSMD3Q7Z407 3707 aa10.4□□□□□ -0.75
CHD1-202ENST00000414220 A0A1B0GV50 99 aa10.39□□□□□ -0.75
CHD1-202ENST00000414220 SPINK4O60575 86 aa10.39□□□□□ -0.75
CHD1-202ENST00000414220 S100A9P06702 114 aaKnown RBP10.39□□□□□ -0.75
CHD1-202ENST00000414220 PFN1P07737 140 aaKnown RBP10.39□□□□□ -0.75
CHD1-202ENST00000414220 SULT1A2P50226 295 aa10.39□□□□□ -0.75
CHD1-202ENST00000414220 Q6ZTI0 123 aa10.39□□□□□ -0.75
CHD1-202ENST00000414220 TVP23CQ96ET8 276 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms