RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 CXCL2P19875 107 aa4.1□□□□□ -1.75
LINC00396-201ENST00000411690 CYCSP99999 105 aaKnown RBP4.1□□□□□ -1.75
LINC00396-201ENST00000411690 SMCO1Q147U7 214 aa4.1□□□□□ -1.75
LINC00396-201ENST00000411690 C21orf62-AS1Q17RA5 79 aa4.1□□□□□ -1.75
LINC00396-201ENST00000411690 LINC01556Q5JQF7 62 aa4.1□□□□□ -1.75
LINC00396-201ENST00000411690 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.1□□□□□ -1.75
LINC00396-201ENST00000411690 C9orf47Q6ZRZ4 202 aa4.1□□□□□ -1.75
LINC00396-201ENST00000411690 TMUB2Q71RG4 321 aa4.1□□□□□ -1.75
LINC00396-201ENST00000411690 S100A7AQ86SG5 101 aa4.1□□□□□ -1.75
LINC00396-201ENST00000411690 SELENOHQ8IZQ5 122 aaKnown RBP4.1□□□□□ -1.75
LINC00396-201ENST00000411690 C12orf45Q8N5I9 185 aaPredicted RBP4.1□□□□□ -1.75
LINC00396-201ENST00000411690 OR51S1Q8NGJ8 323 aa4.1□□□□□ -1.75
LINC00396-201ENST00000411690 DTD1Q8TEA8 209 aa4.1□□□□□ -1.75
LINC00396-201ENST00000411690 BLNKQ8WV28 456 aa4.1□□□□□ -1.75
LINC00396-201ENST00000411690 PCNPQ8WW12 178 aaKnown RBP4.1□□□□□ -1.75
LINC00396-201ENST00000411690 BAALCQ8WXS3 180 aa4.1□□□□□ -1.75
LINC00396-201ENST00000411690 IL22RA2Q969J5 263 aa4.1□□□□□ -1.75
LINC00396-201ENST00000411690 MRPL32Q9BYC8 188 aaKnown RBP4.1□□□□□ -1.75
LINC00396-201ENST00000411690 SLC25A22Q9H936 323 aa4.1□□□□□ -1.75
LINC00396-201ENST00000411690 GSN-AS1Q9NRJ2 163 aa4.1□□□□□ -1.75
LINC00396-201ENST00000411690 SHPKQ9UHJ6 478 aa4.1□□□□□ -1.75
LINC00396-201ENST00000411690 FLVCR2Q9UPI3 526 aa4.1□□□□□ -1.75
LINC00396-201ENST00000411690 A0A0G2JRQ6 117 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 LOC105371267A0A1B0GV96 52 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 SMCO3A2RU48 225 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 CRYM-AS1A6NIL9 109 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 TEX46H3BTG2 121 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 CFDP00746 253 aaPredicted RBP4.09□□□□□ -1.75
LINC00396-201ENST00000411690 IGHV3-30P01768 117 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 IGHV3-33P01772 117 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 NMBP08949 121 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 OR4E1P0C645 316 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 IGHV3-30-3P0DP02 117 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 IGHV3-30-5P0DP03 117 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 ANXA7P20073 488 aaKnown RBP4.09□□□□□ -1.75
LINC00396-201ENST00000411690 ATP5IP56385 69 aaPredicted RBP4.09□□□□□ -1.75
LINC00396-201ENST00000411690 ZNF90Q03938 601 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 AKR1C1Q04828 323 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 UQCC3Q6UW78 93 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 ACOT7LQ6ZUV0 252 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 IQCF2Q8IXL9 164 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 KCNRGQ8N5I3 272 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 Q8N976 141 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 THAP8Q8NA92 274 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 OR1B1Q8NGR6 318 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 CIB3Q96Q77 187 aaPredicted RBP4.09□□□□□ -1.75
LINC00396-201ENST00000411690 TXNDC17Q9BRA2 123 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 SEC22CQ9BRL7 303 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 ARL6Q9H0F7 186 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 RBKSQ9H477 322 aa4.09□□□□□ -1.75
LINC00396-201ENST00000411690 MUC2Q02817 5179 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 TRGV4A0A0C4DH28 118 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 KANTRA0A1W2PQU2 76 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 RAB19A4D1S5 217 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 RNF222A6NCQ9 220 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 SPINK4O60575 86 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 ORM1P02763 201 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 IAPPP10997 89 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 GATA2P23769 480 aaPredicted RBP4.08□□□□□ -1.76
LINC00396-201ENST00000411690 GPX4P36969 197 aaPredicted RBP4.08□□□□□ -1.76
LINC00396-201ENST00000411690 H2BFSP57053 126 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 EIF5AP63241 154 aaKnown RBP4.08□□□□□ -1.76
LINC00396-201ENST00000411690 LAGE3Q14657 143 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 C4orf46Q504U0 113 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 NMSQ5H8A3 153 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 FFAR4Q5NUL3 377 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 LCE1AQ5T7P2 110 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 GFI1BQ5VTD9 330 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 GGNBP1Q5YKI7 109 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 ZNF546Q86UE3 836 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 BPIFCQ8NFQ6 507 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 OR4D5Q8NGN0 318 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 GLYATL2Q8WU03 294 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 MITD1Q8WV92 249 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 GPR82Q96P67 336 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 PYGO2Q9BRQ0 406 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 RTBDNQ9BSG5 229 aaPredicted RBP4.08□□□□□ -1.76
LINC00396-201ENST00000411690 MLST8Q9BVC4 326 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 TMEM147Q9BVK8 224 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 RPH3ALQ9UNE2 315 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 TNFSF18Q9UNG2 199 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 GPR132Q9UNW8 380 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 TMEM56-RWDD3S4R434 201 aa4.08□□□□□ -1.76
LINC00396-201ENST00000411690 FXYD6-FXYD2A0A087WZ82 144 aa4.07□□□□□ -1.76
LINC00396-201ENST00000411690 TRAV8-3A0A0A6YYJ7 113 aa4.07□□□□□ -1.76
LINC00396-201ENST00000411690 TRAV8-6A0A0B4J262 113 aa4.07□□□□□ -1.76
LINC00396-201ENST00000411690 TRAV12-3A0A0B4J271 114 aa4.07□□□□□ -1.76
LINC00396-201ENST00000411690 A0A0J9YXV3 536 aa4.07□□□□□ -1.76
LINC00396-201ENST00000411690 DUXBA0A1W2PPF3 345 aa4.07□□□□□ -1.76
LINC00396-201ENST00000411690 J3KRW8 73 aa4.07□□□□□ -1.76
LINC00396-201ENST00000411690 GOSR2O14653 212 aa4.07□□□□□ -1.76
LINC00396-201ENST00000411690 ARPC5O15511 151 aa4.07□□□□□ -1.76
LINC00396-201ENST00000411690 PPT1P50897 306 aa4.07□□□□□ -1.76
LINC00396-201ENST00000411690 KRTAP10-8P60410 259 aa4.07□□□□□ -1.76
LINC00396-201ENST00000411690 FAM122CQ6P4D5 195 aa4.07□□□□□ -1.76
LINC00396-201ENST00000411690 LYZL2Q7Z4W2 148 aa4.07□□□□□ -1.76
LINC00396-201ENST00000411690 C11orf72Q8NBR9 251 aa4.07□□□□□ -1.76
LINC00396-201ENST00000411690 STOML3Q8TAV4 291 aa4.07□□□□□ -1.76
LINC00396-201ENST00000411690 RPUSD4Q96CM3 377 aaKnown RBP4.07□□□□□ -1.76
LINC00396-201ENST00000411690 VGLL1Q99990 258 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms