RNA–Protein interactions for RNA: ENST00000410889.1

RNU4-27P-201, Transcript of RNA, U4 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU4-27P, Length 139 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-27P-201ENST00000410889 USP54Q70EL1 1684 aa0.75□□□□□ -2.29
RNU4-27P-201ENST00000410889 CRYGSP22914 178 aa0.74□□□□□ -2.29
RNU4-27P-201ENST00000410889 POLR2HP52434 150 aaKnown RBP0.74□□□□□ -2.29
RNU4-27P-201ENST00000410889 TOMM20LQ6UXN7 152 aa0.74□□□□□ -2.29
RNU4-27P-201ENST00000410889 SELENOSQ9BQE4 189 aa0.74□□□□□ -2.29
RNU4-27P-201ENST00000410889 PBRM1Q86U86 1689 aa0.74□□□□□ -2.29
RNU4-27P-201ENST00000410889 MYH1P12882 1939 aa0.74□□□□□ -2.29
RNU4-27P-201ENST00000410889 USP24Q9UPU5 2620 aa0.73□□□□□ -2.29
RNU4-27P-201ENST00000410889 DSPPQ9NZW4 1301 aa0.73□□□□□ -2.29
RNU4-27P-201ENST00000410889 ETV6P41212 452 aa0.73□□□□□ -2.29
RNU4-27P-201ENST00000410889 SPINK7P58062 85 aa0.73□□□□□ -2.29
RNU4-27P-201ENST00000410889 SAMD13Q5VXD3 122 aa0.73□□□□□ -2.29
RNU4-27P-201ENST00000410889 FRAS1Q86XX4 4008 aa0.73□□□□□ -2.29
RNU4-27P-201ENST00000410889 BCORL1Q5H9F3 1711 aa0.72□□□□□ -2.29
RNU4-27P-201ENST00000410889 PRORSD1PA6NEY8 169 aa0.72□□□□□ -2.29
RNU4-27P-201ENST00000410889 EDF1O60869 148 aaKnown RBP0.72□□□□□ -2.29
RNU4-27P-201ENST00000410889 SLC25A4P12235 298 aa0.72□□□□□ -2.29
RNU4-27P-201ENST00000410889 S100GP29377 79 aa0.72□□□□□ -2.29
RNU4-27P-201ENST00000410889 GTF2A1P52655 376 aaPredicted RBP0.72□□□□□ -2.29
RNU4-27P-201ENST00000410889 QRFPP83859 136 aa0.72□□□□□ -2.29
RNU4-27P-201ENST00000410889 TMEM128Q5BJH2 165 aa0.72□□□□□ -2.29
RNU4-27P-201ENST00000410889 XAF1Q6GPH4 301 aa0.72□□□□□ -2.29
RNU4-27P-201ENST00000410889 SMIM15Q7Z3B0 74 aa0.72□□□□□ -2.29
RNU4-27P-201ENST00000410889 OR8J3Q8NGG0 315 aa0.72□□□□□ -2.29
RNU4-27P-201ENST00000410889 OR51A4Q8NGJ6 313 aa0.72□□□□□ -2.29
RNU4-27P-201ENST00000410889 C19orf12Q9NSK7 152 aa0.72□□□□□ -2.29
RNU4-27P-201ENST00000410889 A2MP01023 1474 aa0.72□□□□□ -2.29
RNU4-27P-201ENST00000410889 FGD6Q6ZV73 1430 aa0.72□□□□□ -2.29
RNU4-27P-201ENST00000410889 LOC285556D6RIA3 1793 aa0.71□□□□□ -2.3
RNU4-27P-201ENST00000410889 LOC107984640A0A0U1RRK4 108 aa0.71□□□□□ -2.3
RNU4-27P-201ENST00000410889 IFITM5A6NNB3 132 aa0.71□□□□□ -2.3
RNU4-27P-201ENST00000410889 PGRMC1O00264 195 aaKnown RBP0.71□□□□□ -2.3
RNU4-27P-201ENST00000410889 RPL7P18124 248 aaKnown RBP0.71□□□□□ -2.3
RNU4-27P-201ENST00000410889 BLCAPP62952 87 aa0.71□□□□□ -2.3
RNU4-27P-201ENST00000410889 CSAG1Q6PB30 78 aa0.71□□□□□ -2.3
RNU4-27P-201ENST00000410889 TMEM35BQ8NCS4 154 aa0.71□□□□□ -2.3
RNU4-27P-201ENST00000410889 SMIM7Q9BQ49 75 aa0.71□□□□□ -2.3
RNU4-27P-201ENST00000410889 CBLN4Q9NTU7 201 aa0.71□□□□□ -2.3
RNU4-27P-201ENST00000410889 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.71□□□□□ -2.3
RNU4-27P-201ENST00000410889 NAV3Q8IVL0 2385 aa0.71□□□□□ -2.3
RNU4-27P-201ENST00000410889 CACNA1EQ15878 2313 aa0.7□□□□□ -2.3
RNU4-27P-201ENST00000410889 TMEM189A5PLL7 270 aa0.7□□□□□ -2.3
RNU4-27P-201ENST00000410889 BRK1Q8WUW1 75 aa0.7□□□□□ -2.3
RNU4-27P-201ENST00000410889 PLAC8Q9NZF1 115 aa0.7□□□□□ -2.3
RNU4-27P-201ENST00000410889 FAM135BQ49AJ0 1406 aa0.7□□□□□ -2.3
RNU4-27P-201ENST00000410889 M0QZK8 103 aa0.69□□□□□ -2.3
RNU4-27P-201ENST00000410889 EVI2AP22794 236 aa0.69□□□□□ -2.3
RNU4-27P-201ENST00000410889 C10orf99Q6UWK7 81 aa0.69□□□□□ -2.3
RNU4-27P-201ENST00000410889 SKA2Q8WVK7 121 aaPredicted RBP0.69□□□□□ -2.3
RNU4-27P-201ENST00000410889 CCDC115Q96NT0 180 aa0.69□□□□□ -2.3
RNU4-27P-201ENST00000410889 DDA1Q9BW61 102 aa0.69□□□□□ -2.3
RNU4-27P-201ENST00000410889 MRPL36Q9P0J6 103 aaKnown RBP0.69□□□□□ -2.3
RNU4-27P-201ENST00000410889 CTTNBP2Q8WZ74 1663 aa0.69□□□□□ -2.3
RNU4-27P-201ENST00000410889 TMEM30CPA0ZSE6 113 aa0.68□□□□□ -2.3
RNU4-27P-201ENST00000410889 HBDP02042 147 aa0.68□□□□□ -2.3
RNU4-27P-201ENST00000410889 RPL22P35268 128 aaKnown RBP0.68□□□□□ -2.3
RNU4-27P-201ENST00000410889 SPINK13Q1W4C9 94 aa0.68□□□□□ -2.3
RNU4-27P-201ENST00000410889 OR5A2Q8NGI9 324 aa0.68□□□□□ -2.3
RNU4-27P-201ENST00000410889 MRPL35Q9NZE8 188 aaKnown RBP0.68□□□□□ -2.3
RNU4-27P-201ENST00000410889 CKS2P33552 79 aa0.67□□□□□ -2.3
RNU4-27P-201ENST00000410889 NAT14Q8WUY8 206 aa0.67□□□□□ -2.3
RNU4-27P-201ENST00000410889 KCPQ6ZWJ8 1503 aa0.67□□□□□ -2.3
RNU4-27P-201ENST00000410889 HIGD1CA8MV81 97 aa0.66□□□□□ -2.3
RNU4-27P-201ENST00000410889 TSTD3H0UI37 97 aa0.66□□□□□ -2.3
RNU4-27P-201ENST00000410889 IGF2P01344 180 aa0.66□□□□□ -2.3
RNU4-27P-201ENST00000410889 PRH1P02810 166 aa0.66□□□□□ -2.3
RNU4-27P-201ENST00000410889 GLYATL3Q5SZD4 288 aa0.66□□□□□ -2.3
RNU4-27P-201ENST00000410889 IDO2Q6ZQW0 420 aa0.66□□□□□ -2.3
RNU4-27P-201ENST00000410889 FAM103A1Q9BTL3 118 aaKnown RBP0.66□□□□□ -2.3
RNU4-27P-201ENST00000410889 CDC42EP2O14613 210 aa0.65□□□□□ -2.31
RNU4-27P-201ENST00000410889 UQCRQO14949 82 aa0.65□□□□□ -2.31
RNU4-27P-201ENST00000410889 TPST1O60507 370 aa0.65□□□□□ -2.31
RNU4-27P-201ENST00000410889 RHOHQ15669 191 aa0.65□□□□□ -2.31
RNU4-27P-201ENST00000410889 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
RNU4-27P-201ENST00000410889 LINC00208Q96KT6 92 aa0.65□□□□□ -2.31
RNU4-27P-201ENST00000410889 COMMD3Q9UBI1 195 aa0.65□□□□□ -2.31
RNU4-27P-201ENST00000410889 SPAG17Q6Q759 2223 aa0.65□□□□□ -2.31
RNU4-27P-201ENST00000410889 AFDNP55196 1824 aaKnown RBP0.64□□□□□ -2.31
RNU4-27P-201ENST00000410889 IGHV1-24A0A0C4DH33 117 aa0.64□□□□□ -2.31
RNU4-27P-201ENST00000410889 A0A0G2JMM0 328 aa0.64□□□□□ -2.31
RNU4-27P-201ENST00000410889 PSPHP78330 225 aa0.64□□□□□ -2.31
RNU4-27P-201ENST00000410889 ASB16-AS1Q495Z4 193 aa0.64□□□□□ -2.31
RNU4-27P-201ENST00000410889 LYPD5Q6UWN5 251 aa0.64□□□□□ -2.31
RNU4-27P-201ENST00000410889 SMR3AQ99954 134 aa0.64□□□□□ -2.31
RNU4-27P-201ENST00000410889 PNMA8CA0A1B0GUJ8 204 aa0.63□□□□□ -2.31
RNU4-27P-201ENST00000410889 LOC101927531A0A1B0GV80 90 aa0.63□□□□□ -2.31
RNU4-27P-201ENST00000410889 IL7P13232 177 aa0.63□□□□□ -2.31
RNU4-27P-201ENST00000410889 FXYD3Q14802 87 aa0.63□□□□□ -2.31
RNU4-27P-201ENST00000410889 OTOSQ8NHW6 89 aa0.63□□□□□ -2.31
RNU4-27P-201ENST00000410889 TSKUQ8WUA8 353 aa0.63□□□□□ -2.31
RNU4-27P-201ENST00000410889 DMAC1Q96GE9 116 aa0.63□□□□□ -2.31
RNU4-27P-201ENST00000410889 HSPB11Q9Y547 144 aa0.63□□□□□ -2.31
RNU4-27P-201ENST00000410889 FXYD1O00168 92 aa0.62□□□□□ -2.31
RNU4-27P-201ENST00000410889 LY6G6CO95867 125 aa0.62□□□□□ -2.31
RNU4-27P-201ENST00000410889 PCBD1P61457 104 aa0.62□□□□□ -2.31
RNU4-27P-201ENST00000410889 ZNF56Q15929 161 aa0.62□□□□□ -2.31
RNU4-27P-201ENST00000410889 DEFB132Q7Z7B7 95 aa0.62□□□□□ -2.31
RNU4-27P-201ENST00000410889 XIRP1Q702N8 1843 aaKnown RBP0.61□□□□□ -2.31
RNU4-27P-201ENST00000410889 TNCP24821 2201 aa0.61□□□□□ -2.31
RNU4-27P-201ENST00000410889 MED23Q9ULK4 1368 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms