RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 EPDR1Q9UM22 224 aa13.62□□□□□ -0.23
RTN4-207ENST00000402434 TRAV8-1A0A0A6YYK1 113 aa13.61□□□□□ -0.23
RTN4-207ENST00000402434 Q6AWC8 147 aa13.61□□□□□ -0.23
RTN4-207ENST00000402434 Q6ZQT7 251 aa13.61□□□□□ -0.23
RTN4-207ENST00000402434 EIF4E3Q8N5X7 224 aaKnown RBP13.61□□□□□ -0.23
RTN4-207ENST00000402434 TVP23CQ96ET8 276 aa13.61□□□□□ -0.23
RTN4-207ENST00000402434 NOP10Q9NPE3 64 aaKnown RBP13.61□□□□□ -0.23
RTN4-207ENST00000402434 IGHV4-4A0A075B6R2 117 aa13.61□□□□□ -0.23
RTN4-207ENST00000402434 DPPA3Q6W0C5 159 aa13.61□□□□□ -0.23
RTN4-207ENST00000402434 MBD3L1Q8WWY6 194 aa13.61□□□□□ -0.23
RTN4-207ENST00000402434 NKX6-2Q9C056 277 aaPredicted RBP13.61□□□□□ -0.23
RTN4-207ENST00000402434 RYR3Q15413 4870 aa13.6□□□□□ -0.23
RTN4-207ENST00000402434 PLECQ15149 4684 aaKnown RBP13.6□□□□□ -0.23
RTN4-207ENST00000402434 DEFB130BP0DP73 79 aa13.6□□□□□ -0.23
RTN4-207ENST00000402434 DEFB130AP0DP74 79 aa13.6□□□□□ -0.23
RTN4-207ENST00000402434 DAZ2Q13117 558 aaKnown RBP13.6□□□□□ -0.23
RTN4-207ENST00000402434 LINC00612Q8N6U2 182 aa13.6□□□□□ -0.23
RTN4-207ENST00000402434 C11orf72Q8NBR9 251 aa13.6□□□□□ -0.23
RTN4-207ENST00000402434 ZNF680Q8NEM1 530 aa13.6□□□□□ -0.23
RTN4-207ENST00000402434 FAM210BQ96KR6 192 aa13.6□□□□□ -0.23
RTN4-207ENST00000402434 IGHV1OR15-1A0A075B7D0 117 aa13.59□□□□□ -0.23
RTN4-207ENST00000402434 CBY3A6NI87 242 aa13.59□□□□□ -0.23
RTN4-207ENST00000402434 FAM74A7A6NL05 159 aa13.59□□□□□ -0.23
RTN4-207ENST00000402434 K7EQM0 130 aa13.59□□□□□ -0.23
RTN4-207ENST00000402434 RGS13O14921 159 aa13.59□□□□□ -0.23
RTN4-207ENST00000402434 IGLV2-11P01706 119 aa13.59□□□□□ -0.23
RTN4-207ENST00000402434 LGALS9CQ6DKI2 356 aa13.59□□□□□ -0.23
RTN4-207ENST00000402434 CYB561D1Q8N8Q1 229 aa13.59□□□□□ -0.23
RTN4-207ENST00000402434 ATG101Q9BSB4 218 aa13.59□□□□□ -0.23
RTN4-207ENST00000402434 SNURFLB1AK76 121 aa13.58□□□□□ -0.24
RTN4-207ENST00000402434 UBE2G2P60604 165 aa13.58□□□□□ -0.24
RTN4-207ENST00000402434 FAM213BQ8TBF2 198 aa13.58□□□□□ -0.24
RTN4-207ENST00000402434 TREM1Q9NP99 234 aa13.58□□□□□ -0.24
RTN4-207ENST00000402434 FBLL1A6NHQ2 334 aaKnown RBP13.57□□□□□ -0.24
RTN4-207ENST00000402434 LY6G6CO95867 125 aa13.57□□□□□ -0.24
RTN4-207ENST00000402434 IBA57Q5T440 356 aaKnown RBP13.57□□□□□ -0.24
RTN4-207ENST00000402434 SFT2D1Q8WV19 159 aa13.57□□□□□ -0.24
RTN4-207ENST00000402434 SGK494Q96LW2 274 aa13.57□□□□□ -0.24
RTN4-207ENST00000402434 GSN-AS1Q9NRJ2 163 aa13.57□□□□□ -0.24
RTN4-207ENST00000402434 RYR2Q92736 4967 aa13.57□□□□□ -0.24
RTN4-207ENST00000402434 A0A1B0GVG6 124 aa13.56□□□□□ -0.24
RTN4-207ENST00000402434 HTN3P15516 51 aa13.56□□□□□ -0.24
RTN4-207ENST00000402434 FLI1Q01543 452 aaPredicted RBP13.56□□□□□ -0.24
RTN4-207ENST00000402434 EIF5AL1Q6IS14 154 aaKnown RBP13.56□□□□□ -0.24
RTN4-207ENST00000402434 TMEM75Q8N9X5 138 aa13.56□□□□□ -0.24
RTN4-207ENST00000402434 NDUFAF3Q9BU61 184 aa13.56□□□□□ -0.24
RTN4-207ENST00000402434 TP53TG3Q9ULZ0 132 aa13.56□□□□□ -0.24
RTN4-207ENST00000402434 PSG8Q9UQ74 426 aa13.56□□□□□ -0.24
RTN4-207ENST00000402434 ARL2-SNX15V9GYD0 113 aa13.56□□□□□ -0.24
RTN4-207ENST00000402434 IFNA7P01567 189 aa13.55□□□□□ -0.24
RTN4-207ENST00000402434 TDRG1Q3Y452 100 aa13.55□□□□□ -0.24
RTN4-207ENST00000402434 NDFIP1Q9BT67 221 aa13.55□□□□□ -0.24
RTN4-207ENST00000402434 SACSQ9NZJ4 4579 aa13.55□□□□□ -0.24
RTN4-207ENST00000402434 ATP5G1P05496 136 aa13.55□□□□□ -0.24
RTN4-207ENST00000402434 H2AFB1P0C5Y9 115 aa13.55□□□□□ -0.24
RTN4-207ENST00000402434 ATP5G3P48201 142 aa13.55□□□□□ -0.24
RTN4-207ENST00000402434 TCL1AP56279 114 aa13.55□□□□□ -0.24
RTN4-207ENST00000402434 SLC51BQ86UW2 128 aa13.55□□□□□ -0.24
RTN4-207ENST00000402434 HIST1H2BAQ96A08 127 aa13.55□□□□□ -0.24
RTN4-207ENST00000402434 ALMS1Q8TCU4 4167 aa13.54□□□□□ -0.24
RTN4-207ENST00000402434 TRAV21A0A0B4J279 112 aa13.54□□□□□ -0.24
RTN4-207ENST00000402434 RAB5CP51148 216 aa13.54□□□□□ -0.24
RTN4-207ENST00000402434 MUC21Q5SSG8 566 aa13.54□□□□□ -0.24
RTN4-207ENST00000402434 C9orf62Q8N4C0 152 aa13.54□□□□□ -0.24
RTN4-207ENST00000402434 LINC00479Q96M42 142 aa13.54□□□□□ -0.24
RTN4-207ENST00000402434 TCEAL7Q9BRU2 100 aa13.54□□□□□ -0.24
RTN4-207ENST00000402434 KLF12Q9Y4X4 402 aa13.54□□□□□ -0.24
RTN4-207ENST00000402434 F6UZH7 168 aa13.53□□□□□ -0.24
RTN4-207ENST00000402434 PEX7O00628 323 aa13.53□□□□□ -0.24
RTN4-207ENST00000402434 SAPCD1Q5SSQ6 148 aa13.53□□□□□ -0.24
RTN4-207ENST00000402434 FAM159AQ6UWV7 190 aa13.53□□□□□ -0.24
RTN4-207ENST00000402434 Q6ZTI0 123 aa13.53□□□□□ -0.24
RTN4-207ENST00000402434 PRNTQ86SH4 94 aa13.53□□□□□ -0.24
RTN4-207ENST00000402434 C18orf15Q96N68 181 aa13.53□□□□□ -0.24
RTN4-207ENST00000402434 TRAV1-1A0A0B4J248 108 aa13.52□□□□□ -0.25
RTN4-207ENST00000402434 GAGE12BA1L429 117 aa13.52□□□□□ -0.25
RTN4-207ENST00000402434 SPINK4O60575 86 aa13.52□□□□□ -0.25
RTN4-207ENST00000402434 GAGE7O76087 117 aa13.52□□□□□ -0.25
RTN4-207ENST00000402434 GAGE12FP0CL80 117 aa13.52□□□□□ -0.25
RTN4-207ENST00000402434 GAGE12GP0CL81 117 aa13.52□□□□□ -0.25
RTN4-207ENST00000402434 GAGE12IP0CL82 117 aa13.52□□□□□ -0.25
RTN4-207ENST00000402434 ZFP69Q49AA0 526 aa13.52□□□□□ -0.25
RTN4-207ENST00000402434 C8orf49Q96NF6 230 aa13.52□□□□□ -0.25
RTN4-207ENST00000402434 TRAV34A0A0B4J273 112 aa13.51□□□□□ -0.25
RTN4-207ENST00000402434 F5H768 121 aa13.51□□□□□ -0.25
RTN4-207ENST00000402434 PAGE4O60829 102 aa13.51□□□□□ -0.25
RTN4-207ENST00000402434 SULT1A2P50226 295 aa13.51□□□□□ -0.25
RTN4-207ENST00000402434 PPT1P50897 306 aa13.51□□□□□ -0.25
RTN4-207ENST00000402434 ZNF80P51504 273 aaPredicted RBP13.51□□□□□ -0.25
RTN4-207ENST00000402434 LGALS9BQ3B8N2 356 aa13.51□□□□□ -0.25
RTN4-207ENST00000402434 CST9LP1Q5W188 147 aa13.51□□□□□ -0.25
RTN4-207ENST00000402434 TMEM88Q6PEY1 159 aa13.51□□□□□ -0.25
RTN4-207ENST00000402434 MDFICQ9P1T7 246 aa13.51□□□□□ -0.25
RTN4-207ENST00000402434 DNAH1Q9P2D7 4330 aa13.51□□□□□ -0.25
RTN4-207ENST00000402434 HYDINQ4G0P3 5121 aa13.5□□□□□ -0.25
RTN4-207ENST00000402434 TRGV11A0A075B6L2 103 aa13.49□□□□□ -0.25
RTN4-207ENST00000402434 A0A1B0GV50 99 aa13.49□□□□□ -0.25
RTN4-207ENST00000402434 GCGP01275 180 aa13.49□□□□□ -0.25
RTN4-207ENST00000402434 ZNF415Q09FC8 603 aa13.49□□□□□ -0.25
RTN4-207ENST00000402434 TMEM183BQ1AE95 376 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms