RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 PGPA6NDG6 321 aa11.03□□□□□ -0.64
ATG4B-203ENST00000400772 PRSS29PA6NIE9 313 aa11.03□□□□□ -0.64
ATG4B-203ENST00000400772 RGS13O14921 159 aa11.03□□□□□ -0.64
ATG4B-203ENST00000400772 HMGB3O15347 200 aaKnown RBP11.03□□□□□ -0.64
ATG4B-203ENST00000400772 ZNF266Q14584 549 aa11.03□□□□□ -0.64
ATG4B-203ENST00000400772 IBA57Q5T440 356 aaKnown RBP11.03□□□□□ -0.64
ATG4B-203ENST00000400772 HSD17B11Q8NBQ5 300 aa11.03□□□□□ -0.64
ATG4B-203ENST00000400772 OR2G3Q8NGZ4 309 aa11.03□□□□□ -0.64
ATG4B-203ENST00000400772 GNPNAT1Q96EK6 184 aaPredicted RBP11.03□□□□□ -0.64
ATG4B-203ENST00000400772 HYLS1Q96M11 299 aa11.03□□□□□ -0.64
ATG4B-203ENST00000400772 TRGV1A0A0A0MS02 117 aa11.02□□□□□ -0.65
ATG4B-203ENST00000400772 GIPP09681 153 aaPredicted RBP11.02□□□□□ -0.65
ATG4B-203ENST00000400772 CCL18P55774 89 aa11.02□□□□□ -0.65
ATG4B-203ENST00000400772 TRGV2A0A075B6R0 118 aa11.01□□□□□ -0.65
ATG4B-203ENST00000400772 STAG3L2P0CL84 134 aa11.01□□□□□ -0.65
ATG4B-203ENST00000400772 STAG3L3P0CL85 134 aa11.01□□□□□ -0.65
ATG4B-203ENST00000400772 ATP6V0CP27449 155 aa11.01□□□□□ -0.65
ATG4B-203ENST00000400772 Q6AWC8 147 aa11.01□□□□□ -0.65
ATG4B-203ENST00000400772 TMED6Q8WW62 240 aa11.01□□□□□ -0.65
ATG4B-203ENST00000400772 VSIG2Q96IQ7 327 aa11.01□□□□□ -0.65
ATG4B-203ENST00000400772 PSMG3Q9BT73 122 aaPredicted RBP11.01□□□□□ -0.65
ATG4B-203ENST00000400772 LENEPQ9Y5L5 61 aa11.01□□□□□ -0.65
ATG4B-203ENST00000400772 RNF222A6NCQ9 220 aa11□□□□□ -0.65
ATG4B-203ENST00000400772 H3BNG1 76 aa11□□□□□ -0.65
ATG4B-203ENST00000400772 CDC34P49427 236 aaPredicted RBP11□□□□□ -0.65
ATG4B-203ENST00000400772 MUC21Q5SSG8 566 aa11□□□□□ -0.65
ATG4B-203ENST00000400772 SSX7Q7RTT5 188 aa11□□□□□ -0.65
ATG4B-203ENST00000400772 ARL6IP6Q8N6S5 226 aa11□□□□□ -0.65
ATG4B-203ENST00000400772 ASB13Q8WXK3 278 aa11□□□□□ -0.65
ATG4B-203ENST00000400772 RAB24Q969Q5 203 aa11□□□□□ -0.65
ATG4B-203ENST00000400772 TVP23CQ96ET8 276 aa11□□□□□ -0.65
ATG4B-203ENST00000400772 SH3BGRL3Q9H299 93 aa11□□□□□ -0.65
ATG4B-203ENST00000400772 NBDYA0A0U1RRE5 68 aa10.99□□□□□ -0.65
ATG4B-203ENST00000400772 G3V3Q6 166 aa10.99□□□□□ -0.65
ATG4B-203ENST00000400772 ARL14EPLP0DKL9 152 aa10.99□□□□□ -0.65
ATG4B-203ENST00000400772 GNG5P63218 68 aa10.99□□□□□ -0.65
ATG4B-203ENST00000400772 ESRGQ1W209 222 aa10.99□□□□□ -0.65
ATG4B-203ENST00000400772 FAM74A1Q5RGS3 127 aa10.99□□□□□ -0.65
ATG4B-203ENST00000400772 C1orf134Q5TEV5 83 aa10.99□□□□□ -0.65
ATG4B-203ENST00000400772 GOLT1AQ6ZVE7 132 aa10.99□□□□□ -0.65
ATG4B-203ENST00000400772 CMTM2Q8TAZ6 248 aa10.99□□□□□ -0.65
ATG4B-203ENST00000400772 SUN5Q8TC36 379 aa10.99□□□□□ -0.65
ATG4B-203ENST00000400772 ARPC5LQ9BPX5 153 aa10.99□□□□□ -0.65
ATG4B-203ENST00000400772 MRPL16Q9NX20 251 aaKnown RBP10.99□□□□□ -0.65
ATG4B-203ENST00000400772 MDFICQ9P1T7 246 aa10.99□□□□□ -0.65
ATG4B-203ENST00000400772 RPH3ALQ9UNE2 315 aa10.99□□□□□ -0.65
ATG4B-203ENST00000400772 TRAV8-1A0A0A6YYK1 113 aa10.98□□□□□ -0.65
ATG4B-203ENST00000400772 SERF2P84101 59 aa10.98□□□□□ -0.65
ATG4B-203ENST00000400772 RPL7L1Q6DKI1 246 aaKnown RBP10.98□□□□□ -0.65
ATG4B-203ENST00000400772 ST6GAL2Q96JF0 529 aa10.98□□□□□ -0.65
ATG4B-203ENST00000400772 TNFSF18Q9UNG2 199 aa10.98□□□□□ -0.65
ATG4B-203ENST00000400772 MUC4Q99102 2169 aa10.98□□□□□ -0.65
ATG4B-203ENST00000400772 A0A096LPF7 62 aa10.97□□□□□ -0.65
ATG4B-203ENST00000400772 GCHFRP30047 84 aa10.97□□□□□ -0.65
ATG4B-203ENST00000400772 RGS21Q2M5E4 152 aa10.97□□□□□ -0.65
ATG4B-203ENST00000400772 INO80EQ8NBZ0 244 aaPredicted RBP10.97□□□□□ -0.65
ATG4B-203ENST00000400772 OR2T35Q8NGX2 323 aa10.97□□□□□ -0.65
ATG4B-203ENST00000400772 Q9H8V8 135 aa10.97□□□□□ -0.65
ATG4B-203ENST00000400772 FXYD6-FXYD2A0A087WZ82 144 aa10.96□□□□□ -0.65
ATG4B-203ENST00000400772 IGHV3-53P01767 116 aa10.96□□□□□ -0.65
ATG4B-203ENST00000400772 MBP02144 154 aa10.96□□□□□ -0.65
ATG4B-203ENST00000400772 ZNF415Q09FC8 603 aa10.96□□□□□ -0.65
ATG4B-203ENST00000400772 TDRG1Q3Y452 100 aa10.96□□□□□ -0.65
ATG4B-203ENST00000400772 SGK494Q96LW2 274 aa10.96□□□□□ -0.65
ATG4B-203ENST00000400772 F6UZH7 168 aa10.95□□□□□ -0.66
ATG4B-203ENST00000400772 GNRH2O43555 120 aa10.95□□□□□ -0.66
ATG4B-203ENST00000400772 FHL2Q14192 279 aa10.95□□□□□ -0.66
ATG4B-203ENST00000400772 TMEM183BQ1AE95 376 aa10.95□□□□□ -0.66
ATG4B-203ENST00000400772 SOHLH1Q5JUK2 328 aa10.95□□□□□ -0.66
ATG4B-203ENST00000400772 TMEM183AQ8IXX5 376 aa10.95□□□□□ -0.66
ATG4B-203ENST00000400772 UPK3BQ9BT76 320 aa10.95□□□□□ -0.66
ATG4B-203ENST00000400772 RYR1P21817 5038 aa10.94□□□□□ -0.66
ATG4B-203ENST00000400772 TCRAP04437 139 aa10.94□□□□□ -0.66
ATG4B-203ENST00000400772 ZNF726P1Q15940 193 aa10.94□□□□□ -0.66
ATG4B-203ENST00000400772 FAM159AQ6UWV7 190 aa10.94□□□□□ -0.66
ATG4B-203ENST00000400772 RASL10AQ92737 203 aa10.94□□□□□ -0.66
ATG4B-203ENST00000400772 KRTAP1-5Q9BYS1 174 aa10.94□□□□□ -0.66
ATG4B-203ENST00000400772 ACTR3CQ9C0K3 210 aaPredicted RBP10.94□□□□□ -0.66
ATG4B-203ENST00000400772 TREM1Q9NP99 234 aa10.94□□□□□ -0.66
ATG4B-203ENST00000400772 TRGV11A0A075B6L2 103 aa10.93□□□□□ -0.66
ATG4B-203ENST00000400772 BORCS7-ASMTA0A0B4J1R7 106 aa10.93□□□□□ -0.66
ATG4B-203ENST00000400772 PAX4O43316 350 aa10.93□□□□□ -0.66
ATG4B-203ENST00000400772 CXorf1O96002 111 aa10.93□□□□□ -0.66
ATG4B-203ENST00000400772 IGLV2-11P01706 119 aa10.93□□□□□ -0.66
ATG4B-203ENST00000400772 CRYBA4P53673 196 aa10.93□□□□□ -0.66
ATG4B-203ENST00000400772 SUMO1P63165 101 aaKnown RBP10.93□□□□□ -0.66
ATG4B-203ENST00000400772 C6orf223Q8N319 242 aa10.93□□□□□ -0.66
ATG4B-203ENST00000400772 C5orf17Q8NAS9 161 aa10.93□□□□□ -0.66
ATG4B-203ENST00000400772 SPXQ9BT56 116 aa10.93□□□□□ -0.66
ATG4B-203ENST00000400772 CYTL1Q9NRR1 136 aa10.93□□□□□ -0.66
ATG4B-203ENST00000400772 NAGKQ9UJ70 344 aa10.93□□□□□ -0.66
ATG4B-203ENST00000400772 MRPS16Q9Y3D3 137 aaKnown RBP10.93□□□□□ -0.66
ATG4B-203ENST00000400772 TRAV21A0A0B4J279 112 aa10.92□□□□□ -0.66
ATG4B-203ENST00000400772 IGHV3-16A0A0C4DH30 117 aa10.92□□□□□ -0.66
ATG4B-203ENST00000400772 SERTM2A0A1B0GWG4 89 aa10.92□□□□□ -0.66
ATG4B-203ENST00000400772 GGTLC3B5MD39 225 aa10.92□□□□□ -0.66
ATG4B-203ENST00000400772 ZNF80P51504 273 aaPredicted RBP10.92□□□□□ -0.66
ATG4B-203ENST00000400772 TNP2Q05952 138 aa10.92□□□□□ -0.66
ATG4B-203ENST00000400772 C8orf49Q96NF6 230 aa10.92□□□□□ -0.66
ATG4B-203ENST00000400772 TMEM167BQ9NRX6 74 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms