RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 RNASE4P34096 147 aaKnown RBP18.34■□□□□ 0.53
U2AF1-203ENST00000398137 FLI1Q01543 452 aaPredicted RBP18.34■□□□□ 0.53
U2AF1-203ENST00000398137 TVP23CQ96ET8 276 aa18.34■□□□□ 0.53
U2AF1-203ENST00000398137 PSG8Q9UQ74 426 aa18.34■□□□□ 0.53
U2AF1-203ENST00000398137 LENEPQ9Y5L5 61 aa18.34■□□□□ 0.53
U2AF1-203ENST00000398137 IGHV4-28A0A0C4DH34 117 aa18.33■□□□□ 0.52
U2AF1-203ENST00000398137 DEFB4AO15263 64 aa18.33■□□□□ 0.52
U2AF1-203ENST00000398137 NMBP08949 121 aa18.33■□□□□ 0.52
U2AF1-203ENST00000398137 AKR1C3P42330 323 aa18.33■□□□□ 0.52
U2AF1-203ENST00000398137 PRNTQ86SH4 94 aa18.33■□□□□ 0.52
U2AF1-203ENST00000398137 Q8NAQ8 132 aa18.33■□□□□ 0.52
U2AF1-203ENST00000398137 LYPD6BQ8NI32 183 aa18.33■□□□□ 0.52
U2AF1-203ENST00000398137 PMS2P11Q13670 270 aa18.32■□□□□ 0.52
U2AF1-203ENST00000398137 LINC01587Q99440 93 aa18.32■□□□□ 0.52
U2AF1-203ENST00000398137 NDFIP1Q9BT67 221 aa18.32■□□□□ 0.52
U2AF1-203ENST00000398137 MIFP14174 115 aa18.31■□□□□ 0.52
U2AF1-203ENST00000398137 Q86TA4 180 aa18.31■□□□□ 0.52
U2AF1-203ENST00000398137 TMEM256Q8N2U0 113 aa18.31■□□□□ 0.52
U2AF1-203ENST00000398137 NEU1Q99519 415 aa18.31■□□□□ 0.52
U2AF1-203ENST00000398137 C20orf144Q9BQM9 153 aa18.31■□□□□ 0.52
U2AF1-203ENST00000398137 NIPSNAP3BQ9BS92 247 aa18.31■□□□□ 0.52
U2AF1-203ENST00000398137 TREM1Q9NP99 234 aa18.31■□□□□ 0.52
U2AF1-203ENST00000398137 LOC102723971A0A1B0GUV8 181 aa18.3■□□□□ 0.52
U2AF1-203ENST00000398137 FBLL1A6NHQ2 334 aaKnown RBP18.3■□□□□ 0.52
U2AF1-203ENST00000398137 ZNF705GA8MUZ8 300 aaPredicted RBP18.3■□□□□ 0.52
U2AF1-203ENST00000398137 MEF2BQ02080 365 aaPredicted RBP18.3■□□□□ 0.52
U2AF1-203ENST00000398137 PRM2P04554 102 aa18.29■□□□□ 0.52
U2AF1-203ENST00000398137 UBE2G1P62253 170 aa18.29■□□□□ 0.52
U2AF1-203ENST00000398137 C2CD4CQ8TF44 421 aa18.29■□□□□ 0.52
U2AF1-203ENST00000398137 FMC1Q96HJ9 113 aa18.29■□□□□ 0.52
U2AF1-203ENST00000398137 C8orf49Q96NF6 230 aa18.29■□□□□ 0.52
U2AF1-203ENST00000398137 TXNDC17Q9BRA2 123 aa18.29■□□□□ 0.52
U2AF1-203ENST00000398137 VAX2Q9UIW0 290 aa18.29■□□□□ 0.52
U2AF1-203ENST00000398137 BIRC6Q9NR09 4857 aa18.28■□□□□ 0.52
U2AF1-203ENST00000398137 SMIM9A6NGZ8 99 aa18.28■□□□□ 0.52
U2AF1-203ENST00000398137 H7BYZ3 331 aa18.28■□□□□ 0.52
U2AF1-203ENST00000398137 RRN3P1Q2M238 152 aa18.28■□□□□ 0.52
U2AF1-203ENST00000398137 Q6ZQT7 251 aa18.28■□□□□ 0.52
U2AF1-203ENST00000398137 C11orf68Q9H3H3 251 aaKnown RBP18.28■□□□□ 0.52
U2AF1-203ENST00000398137 CXorf65A6NEN9 183 aa18.27■□□□□ 0.52
U2AF1-203ENST00000398137 HTN1P15515 57 aa18.27■□□□□ 0.52
U2AF1-203ENST00000398137 TAGLN2P37802 199 aaKnown RBP18.27■□□□□ 0.52
U2AF1-203ENST00000398137 C11orf52Q96A22 123 aa18.27■□□□□ 0.52
U2AF1-203ENST00000398137 KLF12Q9Y4X4 402 aa18.27■□□□□ 0.52
U2AF1-203ENST00000398137 ZNF324O75467 553 aaPredicted RBP18.26■□□□□ 0.51
U2AF1-203ENST00000398137 TAS2R60P59551 318 aa18.26■□□□□ 0.51
U2AF1-203ENST00000398137 TMEM183BQ1AE95 376 aa18.26■□□□□ 0.51
U2AF1-203ENST00000398137 RBFOX3A6NFN3 312 aa18.25■□□□□ 0.51
U2AF1-203ENST00000398137 TOR2AQ5JU69 321 aa18.25■□□□□ 0.51
U2AF1-203ENST00000398137 SAPCD1Q5SSQ6 148 aa18.25■□□□□ 0.51
U2AF1-203ENST00000398137 CEMP1Q6PRD7 247 aaPredicted RBP18.25■□□□□ 0.51
U2AF1-203ENST00000398137 LINC00476Q8WZB0 136 aa18.25■□□□□ 0.51
U2AF1-203ENST00000398137 PDE6DO43924 150 aa18.24■□□□□ 0.51
U2AF1-203ENST00000398137 AZU1P20160 251 aa18.24■□□□□ 0.51
U2AF1-203ENST00000398137 EMP1P54849 157 aa18.24■□□□□ 0.51
U2AF1-203ENST00000398137 Q6AWC8 147 aa18.24■□□□□ 0.51
U2AF1-203ENST00000398137 DERL1Q9BUN8 251 aa18.24■□□□□ 0.51
U2AF1-203ENST00000398137 KMT2AQ03164 3969 aa18.23■□□□□ 0.51
U2AF1-203ENST00000398137 TRBV6-1A0A0K0K1D8 114 aa18.23■□□□□ 0.51
U2AF1-203ENST00000398137 NUPR2A6NF83 97 aa18.23■□□□□ 0.51
U2AF1-203ENST00000398137 SMUG1Q53HV7 270 aa18.23■□□□□ 0.51
U2AF1-203ENST00000398137 ZNF506Q5JVG8 444 aa18.23■□□□□ 0.51
U2AF1-203ENST00000398137 PYGO2Q9BRQ0 406 aa18.23■□□□□ 0.51
U2AF1-203ENST00000398137 RGS13O14921 159 aa18.22■□□□□ 0.51
U2AF1-203ENST00000398137 GCGP01275 180 aa18.22■□□□□ 0.51
U2AF1-203ENST00000398137 LTAP01374 205 aa18.22■□□□□ 0.51
U2AF1-203ENST00000398137 S100A9P06702 114 aaKnown RBP18.22■□□□□ 0.51
U2AF1-203ENST00000398137 ZNF80P51504 273 aaPredicted RBP18.22■□□□□ 0.51
U2AF1-203ENST00000398137 IFITM2Q01629 132 aa18.22■□□□□ 0.51
U2AF1-203ENST00000398137 RPL35P42766 123 aaKnown RBP18.21■□□□□ 0.51
U2AF1-203ENST00000398137 MUC21Q5SSG8 566 aa18.21■□□□□ 0.51
U2AF1-203ENST00000398137 FAM210AQ96ND0 272 aa18.21■□□□□ 0.51
U2AF1-203ENST00000398137 MED9Q9NWA0 146 aa18.21■□□□□ 0.51
U2AF1-203ENST00000398137 NAGKQ9UJ70 344 aa18.21■□□□□ 0.51
U2AF1-203ENST00000398137 ZFP30Q9Y2G7 519 aa18.21■□□□□ 0.51
U2AF1-203ENST00000398137 TRAV21A0A0B4J279 112 aa18.2■□□□□ 0.5
U2AF1-203ENST00000398137 TMEM189A5PLL7 270 aa18.2■□□□□ 0.5
U2AF1-203ENST00000398137 NHLRC2Q8NBF2 726 aa18.2■□□□□ 0.5
U2AF1-203ENST00000398137 EIF5A2Q9GZV4 153 aaKnown RBP18.2■□□□□ 0.5
U2AF1-203ENST00000398137 IGHV1OR15-1A0A075B7D0 117 aa18.19■□□□□ 0.5
U2AF1-203ENST00000398137 CBY3A6NI87 242 aa18.19■□□□□ 0.5
U2AF1-203ENST00000398137 ZNF767PQ75MW2 155 aa18.19■□□□□ 0.5
U2AF1-203ENST00000398137 RNASE8Q8TDE3 154 aaKnown RBP18.19■□□□□ 0.5
U2AF1-203ENST00000398137 TMEM263Q8WUH6 116 aaKnown RBP18.19■□□□□ 0.5
U2AF1-203ENST00000398137 C16orf74Q96GX8 76 aa18.19■□□□□ 0.5
U2AF1-203ENST00000398137 ZC2HC1AQ96GY0 325 aa18.19■□□□□ 0.5
U2AF1-203ENST00000398137 LINC00467Q9BRT7 94 aa18.19■□□□□ 0.5
U2AF1-203ENST00000398137 CELA1Q9UNI1 258 aa18.19■□□□□ 0.5
U2AF1-203ENST00000398137 EIF4E3Q8N5X7 224 aaKnown RBP18.18■□□□□ 0.5
U2AF1-203ENST00000398137 PHLDA1Q8WV24 401 aaPredicted RBP18.18■□□□□ 0.5
U2AF1-203ENST00000398137 PLAC8L1A1L4L8 177 aa18.17■□□□□ 0.5
U2AF1-203ENST00000398137 PFN1P07737 140 aaKnown RBP18.17■□□□□ 0.5
U2AF1-203ENST00000398137 NANOS2P60321 138 aaKnown RBP18.17■□□□□ 0.5
U2AF1-203ENST00000398137 RAB14P61106 215 aa18.17■□□□□ 0.5
U2AF1-203ENST00000398137 BAGE2Q86Y30 109 aa18.17■□□□□ 0.5
U2AF1-203ENST00000398137 TP53TG3Q9ULZ0 132 aa18.17■□□□□ 0.5
U2AF1-203ENST00000398137 RAB19A4D1S5 217 aa18.16■□□□□ 0.5
U2AF1-203ENST00000398137 CENPWQ5EE01 88 aa18.16■□□□□ 0.5
U2AF1-203ENST00000398137 ZNF493Q6ZR52 646 aa18.16■□□□□ 0.5
U2AF1-203ENST00000398137 TMEM183AQ8IXX5 376 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms