RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 LINC00587B1AMM8 73 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 IBA57-AS1B1ANH7 110 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 E5RGE8 158 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 AGPAT2O15120 278 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 NDUFS6O75380 124 aaKnown RBP6.26□□□□□ -1.41
NEDD9-203ENST00000397378 SFT2D2O95562 160 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 ORM1P02763 201 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 S100A8P05109 93 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 NMBP08949 121 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 HOXB5P09067 269 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 CRISP2P16562 243 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 FHITP49789 147 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 ZNF415Q09FC8 603 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 BTN1A1Q13410 526 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 OPCMLQ14982 345 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 TMEM14EPQ6UXP3 125 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 OR10P1Q8NGE3 313 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 TMEM37Q8WXS4 190 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 DIRAS2Q96HU8 199 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 SMIM8Q96KF7 97 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 LINC00477Q96M19 166 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 TXNDC17Q9BRA2 123 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 OR51M1Q9H341 326 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 MGAT4CQ9UBM8 478 aa6.26□□□□□ -1.41
NEDD9-203ENST00000397378 IGHV3-38A0A0C4DH36 116 aa6.25□□□□□ -1.41
NEDD9-203ENST00000397378 SERTM2A0A1B0GWG4 89 aa6.25□□□□□ -1.41
NEDD9-203ENST00000397378 C5orf51A6NDU8 294 aa6.25□□□□□ -1.41
NEDD9-203ENST00000397378 COX7A2P2O60397 106 aa6.25□□□□□ -1.41
NEDD9-203ENST00000397378 GYPEP15421 78 aa6.25□□□□□ -1.41
NEDD9-203ENST00000397378 FAUP35544 74 aaKnown RBP6.25□□□□□ -1.41
NEDD9-203ENST00000397378 TIRAPP58753 221 aa6.25□□□□□ -1.41
NEDD9-203ENST00000397378 VAMP2P63027 116 aa6.25□□□□□ -1.41
NEDD9-203ENST00000397378 LINC01556Q5JQF7 62 aa6.25□□□□□ -1.41
NEDD9-203ENST00000397378 C10orf113Q5VZT2 155 aa6.25□□□□□ -1.41
NEDD9-203ENST00000397378 PCNPQ8WW12 178 aaKnown RBP6.25□□□□□ -1.41
NEDD9-203ENST00000397378 AGPAT4-IT1Q9H0P7 198 aa6.25□□□□□ -1.41
NEDD9-203ENST00000397378 CCDC59Q9P031 241 aaKnown RBP6.25□□□□□ -1.41
NEDD9-203ENST00000397378 TP53TG3Q9ULZ0 132 aa6.25□□□□□ -1.41
NEDD9-203ENST00000397378 RCL1Q9Y2P8 373 aaKnown RBP6.25□□□□□ -1.41
NEDD9-203ENST00000397378 IGHV1OR15-1A0A075B7D0 117 aa6.24□□□□□ -1.41
NEDD9-203ENST00000397378 PGPEP1LA6NFU8 196 aa6.24□□□□□ -1.41
NEDD9-203ENST00000397378 M0R3E3 92 aa6.24□□□□□ -1.41
NEDD9-203ENST00000397378 MBP02144 154 aa6.24□□□□□ -1.41
NEDD9-203ENST00000397378 GPX1P07203 203 aa6.24□□□□□ -1.41
NEDD9-203ENST00000397378 METTL15P1P0C7V9 234 aa6.24□□□□□ -1.41
NEDD9-203ENST00000397378 RNASE4P34096 147 aaKnown RBP6.24□□□□□ -1.41
NEDD9-203ENST00000397378 ERCC8Q13216 396 aa6.24□□□□□ -1.41
NEDD9-203ENST00000397378 PPP1R1AQ13522 171 aa6.24□□□□□ -1.41
NEDD9-203ENST00000397378 C9orf47Q6ZRZ4 202 aa6.24□□□□□ -1.41
NEDD9-203ENST00000397378 SH2D6Q7Z4S9 175 aa6.24□□□□□ -1.41
NEDD9-203ENST00000397378 ZFAND2AQ8N6M9 145 aa6.24□□□□□ -1.41
NEDD9-203ENST00000397378 OR10G4Q8NGN3 311 aa6.24□□□□□ -1.41
NEDD9-203ENST00000397378 SLC25A21Q9BQT8 299 aaPredicted RBP6.24□□□□□ -1.41
NEDD9-203ENST00000397378 TCEAL7Q9BRU2 100 aa6.24□□□□□ -1.41
NEDD9-203ENST00000397378 GGACTQ9BVM4 153 aa6.24□□□□□ -1.41
NEDD9-203ENST00000397378 DNAJC4Q9NNZ3 241 aa6.24□□□□□ -1.41
NEDD9-203ENST00000397378 C9JCJ5 164 aa6.23□□□□□ -1.41
NEDD9-203ENST00000397378 SSSCA1O60232 199 aa6.23□□□□□ -1.41
NEDD9-203ENST00000397378 SFTA3P0C7M3 94 aa6.23□□□□□ -1.41
NEDD9-203ENST00000397378 CEBPGP53567 150 aa6.23□□□□□ -1.41
NEDD9-203ENST00000397378 TAS2R30P59541 319 aa6.23□□□□□ -1.41
NEDD9-203ENST00000397378 RASL10AQ92737 203 aa6.23□□□□□ -1.41
NEDD9-203ENST00000397378 ZNF479Q96JC4 524 aa6.23□□□□□ -1.41
NEDD9-203ENST00000397378 MGST2Q99735 147 aa6.23□□□□□ -1.41
NEDD9-203ENST00000397378 SOSTQ9BQB4 213 aa6.23□□□□□ -1.41
NEDD9-203ENST00000397378 TRBV19A0A075B6N1 114 aa6.22□□□□□ -1.41
NEDD9-203ENST00000397378 IGLV2-8P01709 118 aa6.22□□□□□ -1.41
NEDD9-203ENST00000397378 HNRNPA3P51991 378 aaKnown RBP6.22□□□□□ -1.41
NEDD9-203ENST00000397378 UBE2MP61081 183 aaKnown RBP6.22□□□□□ -1.41
NEDD9-203ENST00000397378 RPL37AP61513 92 aaKnown RBP6.22□□□□□ -1.41
NEDD9-203ENST00000397378 ARL16Q0P5N6 197 aa6.22□□□□□ -1.41
NEDD9-203ENST00000397378 PDE6HQ13956 83 aa6.22□□□□□ -1.41
NEDD9-203ENST00000397378 TDRG1Q3Y452 100 aa6.22□□□□□ -1.41
NEDD9-203ENST00000397378 PRR9Q5T870 116 aa6.22□□□□□ -1.41
NEDD9-203ENST00000397378 Q6ZRG5 221 aa6.22□□□□□ -1.41
NEDD9-203ENST00000397378 OR1L4Q8NGR5 311 aa6.22□□□□□ -1.41
NEDD9-203ENST00000397378 BLNKQ8WV28 456 aa6.22□□□□□ -1.41
NEDD9-203ENST00000397378 DEDD2Q8WXF8 326 aa6.22□□□□□ -1.41
NEDD9-203ENST00000397378 PFDN5Q99471 154 aa6.22□□□□□ -1.41
NEDD9-203ENST00000397378 SRRQ9GZT4 340 aa6.22□□□□□ -1.41
NEDD9-203ENST00000397378 Q9HAA7 133 aa6.22□□□□□ -1.41
NEDD9-203ENST00000397378 TNXBP22105 4242 aa6.21□□□□□ -1.42
NEDD9-203ENST00000397378 TRBV7-9A0A0J9YWB2 115 aa6.21□□□□□ -1.42
NEDD9-203ENST00000397378 LINC00862A6NCI5 91 aa6.21□□□□□ -1.42
NEDD9-203ENST00000397378 NDUFB4O95168 129 aa6.21□□□□□ -1.42
NEDD9-203ENST00000397378 LINC00614P0C842 121 aa6.21□□□□□ -1.42
NEDD9-203ENST00000397378 AP3S2P59780 193 aa6.21□□□□□ -1.42
NEDD9-203ENST00000397378 ASAH1Q13510 395 aa6.21□□□□□ -1.42
NEDD9-203ENST00000397378 WFDC2Q14508 124 aa6.21□□□□□ -1.42
NEDD9-203ENST00000397378 LAGE3Q14657 143 aa6.21□□□□□ -1.42
NEDD9-203ENST00000397378 TMEM78Q5T7P6 136 aa6.21□□□□□ -1.42
NEDD9-203ENST00000397378 Q6ZQT7 251 aa6.21□□□□□ -1.42
NEDD9-203ENST00000397378 C12orf45Q8N5I9 185 aaPredicted RBP6.21□□□□□ -1.42
NEDD9-203ENST00000397378 TM2D2Q9BX73 214 aa6.21□□□□□ -1.42
NEDD9-203ENST00000397378 SLC25A31Q9H0C2 315 aa6.21□□□□□ -1.42
NEDD9-203ENST00000397378 TMEM14CQ9P0S9 112 aa6.21□□□□□ -1.42
NEDD9-203ENST00000397378 ZNF492Q9P255 531 aa6.21□□□□□ -1.42
NEDD9-203ENST00000397378 TRAV8-6A0A0B4J262 113 aa6.2□□□□□ -1.42
NEDD9-203ENST00000397378 TRAV4A0A0B4J268 109 aa6.2□□□□□ -1.42
NEDD9-203ENST00000397378 FABP12A6NFH5 140 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms